==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 17-JAN-06 2DCX . COMPND 2 MOLECULE: DERMASEPTIN-4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.E.SHALEV,S.ROTEM,A.FISH,A.MOR . 14 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1615.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 21.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 90 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 49.6 -0.1 7.7 3.3 2 2 A L + 0 0 126 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.900 360.0 97.7 89.6 52.7 0.6 4.2 4.8 3 3 A W >> + 0 0 87 3,-0.1 3,-4.6 2,-0.0 4,-1.2 0.580 59.4 73.5-134.1 -42.3 0.1 1.8 1.8 4 4 A K T 34 S+ 0 0 130 1,-0.3 3,-0.0 2,-0.2 0, 0.0 0.823 99.3 57.5 -46.9 -26.0 3.5 1.0 0.3 5 5 A T T 34 S+ 0 0 94 1,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.354 98.2 61.3 -87.5 8.2 3.9 -1.1 3.5 6 6 A L T <4 S+ 0 0 72 -3,-4.6 7,-1.3 1,-0.1 -2,-0.2 0.754 114.8 29.7-101.6 -33.1 0.7 -3.0 2.6 7 7 A L S < S+ 0 0 29 -4,-1.2 4,-0.3 5,-0.2 -2,-0.1 -0.162 72.9 139.4-116.6 39.5 2.0 -4.5 -0.6 8 8 A K S S- 0 0 115 1,-0.2 -1,-0.1 -5,-0.1 -3,-0.1 0.684 102.9 -42.5 -56.6 -12.3 5.7 -4.6 0.4 9 9 A K S S+ 0 0 155 -3,-0.2 -1,-0.2 4,-0.0 -2,-0.1 0.168 125.8 93.6 169.1 -18.5 5.6 -7.9 -1.4 10 10 A V S S- 0 0 45 -4,-0.2 -2,-0.1 3,-0.1 -3,-0.1 0.276 93.9-120.5 -77.9 14.2 2.3 -9.5 -0.3 11 11 A L S S- 0 0 146 -4,-0.3 -4,-0.1 2,-0.1 -3,-0.1 0.954 82.3 -29.8 44.2 66.6 0.6 -8.1 -3.4 12 12 A K 0 0 138 1,-0.1 -5,-0.2 -9,-0.1 -6,-0.0 0.929 360.0 360.0 57.8 96.4 -1.9 -6.1 -1.3 13 13 A A 0 0 101 -7,-1.3 -1,-0.1 0, 0.0 -5,-0.1 -0.813 360.0 360.0-158.2 360.0 -2.4 -8.1 1.9 14 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 15 0 A X 0 0 287 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 -6.3 4.2 3.9