==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 11-NOV-99 1DDV . COMPND 2 MOLECULE: GLGF-DOMAIN PROTEIN HOMER; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR J.BENEKEN,J.C.TU,B.XIAO,P.F.WORLEY,D.J.LEAHY . 110 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6734.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 39 35.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A I 0 0 143 0, 0.0 2,-0.3 0, 0.0 31,-0.2 0.000 360.0 360.0 360.0-177.2 26.4 3.8 16.6 2 7 A F E -A 31 0A 40 29,-1.7 29,-2.7 2,-0.0 2,-0.3 -0.933 360.0-171.7-152.2 123.6 23.2 5.6 15.4 3 8 A S E +A 30 0A 56 -2,-0.3 2,-0.3 27,-0.2 27,-0.2 -0.886 11.6 157.1-119.9 150.4 20.8 4.7 12.6 4 9 A T E -A 29 0A 13 25,-2.1 25,-3.0 -2,-0.3 2,-0.3 -0.919 35.3-102.7-155.3 175.6 17.8 6.5 11.0 5 10 A R E +A 28 0A 152 -2,-0.3 81,-0.3 23,-0.2 2,-0.3 -0.856 43.1 144.2-112.0 146.6 15.7 6.6 7.8 6 11 A A E -A 27 0A 2 21,-1.7 21,-2.3 -2,-0.3 2,-0.5 -0.956 48.2-107.2-171.4 154.3 15.9 9.2 5.0 7 12 A H E -D 84 0B 67 77,-2.2 77,-2.4 -2,-0.3 2,-0.3 -0.795 43.6-136.3 -88.3 134.6 15.6 9.7 1.3 8 13 A V E +D 83 0B 0 -2,-0.5 14,-3.3 17,-0.4 15,-1.4 -0.738 27.6 168.9-100.8 142.9 19.0 10.3 -0.2 9 14 A F E -DE 82 21B 18 73,-2.1 73,-2.6 -2,-0.3 2,-0.3 -0.942 18.1-154.9-141.6 160.5 20.1 12.9 -2.8 10 15 A Q E -DE 81 20B 61 10,-1.8 10,-2.8 -2,-0.3 71,-0.2 -0.976 33.9-105.1-134.9 143.7 23.3 14.3 -4.3 11 16 A I E - E 0 19B 18 69,-1.6 8,-0.2 -2,-0.3 69,-0.2 -0.399 48.4 -95.5 -67.0 148.3 23.6 17.7 -5.9 12 17 A D > - 0 0 16 6,-3.1 4,-1.9 1,-0.1 5,-0.2 -0.491 29.5-138.0 -67.8 133.6 23.9 17.5 -9.7 13 18 A P T 4 S+ 0 0 108 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.797 93.8 57.0 -62.5 -32.5 27.5 17.6 -10.8 14 19 A N T 4 S+ 0 0 154 1,-0.1 -3,-0.0 2,-0.0 -2,-0.0 0.964 130.4 4.1 -67.3 -54.8 27.1 19.9 -13.7 15 20 A T T 4 S- 0 0 77 3,-0.1 -1,-0.1 0, 0.0 -4,-0.0 0.519 83.4-140.1-109.3 -9.6 25.6 23.0 -12.0 16 21 A K S < S+ 0 0 130 -4,-1.9 -5,-0.1 1,-0.1 3,-0.1 0.915 80.2 94.1 47.3 47.6 25.7 21.8 -8.4 17 22 A K + 0 0 158 1,-0.2 2,-0.2 -5,-0.2 -1,-0.1 0.561 66.3 66.3-130.5 -42.0 22.3 23.4 -7.9 18 23 A N S S- 0 0 103 -6,-0.1 -6,-3.1 1,-0.0 2,-0.4 -0.562 75.7-123.4 -90.7 151.7 19.7 20.7 -8.5 19 24 A W E -E 11 0B 38 -8,-0.2 -8,-0.2 87,-0.2 -1,-0.0 -0.785 17.5-160.0 -97.5 134.4 19.1 17.6 -6.3 20 25 A V E -E 10 0B 72 -10,-2.8 -10,-1.8 -2,-0.4 2,-0.1 -0.953 25.2-118.8-113.7 121.1 19.3 14.1 -7.8 21 26 A P E -E 9 0B 74 0, 0.0 -12,-0.3 0, 0.0 3,-0.1 -0.387 26.1-175.4 -62.5 128.4 17.6 11.3 -5.9 22 27 A T S S+ 0 0 39 -14,-3.3 2,-0.3 -2,-0.1 -13,-0.2 0.759 71.7 40.7 -91.5 -34.6 20.1 8.6 -4.9 23 28 A S S S- 0 0 5 -15,-1.4 3,-0.1 1,-0.1 4,-0.1 -0.778 71.0-140.6-112.7 160.2 17.6 6.2 -3.4 24 29 A K S S+ 0 0 190 -2,-0.3 2,-0.3 2,-0.1 -1,-0.1 0.465 88.5 1.4 -97.5 -2.7 14.1 5.3 -4.8 25 30 A H S S- 0 0 92 -19,-0.1 -17,-0.4 -17,-0.0 2,-0.1 -0.876 107.9 -51.0-163.4-177.5 12.6 5.3 -1.3 26 31 A A - 0 0 33 -2,-0.3 2,-0.3 -19,-0.2 -19,-0.2 -0.420 58.2-171.3 -69.1 148.2 13.8 5.9 2.2 27 32 A V E -A 6 0A 8 -21,-2.3 -21,-1.7 -2,-0.1 2,-0.2 -0.938 30.0 -91.6-137.6 159.9 16.9 4.0 3.2 28 33 A T E -A 5 0A 59 17,-0.3 17,-0.4 -2,-0.3 2,-0.4 -0.529 37.7-169.8 -74.5 136.1 18.8 3.4 6.4 29 34 A V E -A 4 0A 0 -25,-3.0 -25,-2.1 -2,-0.2 2,-0.3 -0.999 9.7-171.7-128.2 127.0 21.6 5.9 7.1 30 35 A S E -AB 3 43A 18 13,-2.9 13,-2.6 -2,-0.4 2,-0.6 -0.935 26.5-140.8-129.8 148.4 24.0 5.2 10.0 31 36 A Y E +AB 2 42A 4 -29,-2.7 -29,-1.7 -2,-0.3 2,-0.4 -0.896 35.8 178.2 -97.6 126.5 26.8 6.9 11.9 32 37 A F E - B 0 41A 97 9,-3.3 9,-2.6 -2,-0.6 2,-0.7 -0.994 30.3-137.3-139.6 132.6 29.5 4.3 12.6 33 38 A Y E - B 0 40A 97 -2,-0.4 2,-1.0 7,-0.2 7,-0.2 -0.791 22.3-145.7 -86.9 118.5 32.9 4.4 14.3 34 39 A D E >>> - B 0 39A 26 5,-2.6 4,-2.1 -2,-0.7 3,-1.4 -0.748 10.3-166.8 -89.3 100.7 35.3 2.4 12.1 35 40 A S T 345S+ 0 0 90 -2,-1.0 -1,-0.2 1,-0.3 5,-0.1 0.581 85.4 60.4 -63.2 -10.2 37.7 0.7 14.6 36 41 A T T 345S+ 0 0 103 3,-0.1 -1,-0.3 1,-0.1 -2,-0.0 0.728 120.9 22.5 -88.6 -23.0 40.0 -0.2 11.7 37 42 A R T <45S- 0 0 172 -3,-1.4 -2,-0.2 2,-0.2 -1,-0.1 0.432 97.7-130.4-118.5 -7.8 40.6 3.4 10.7 38 43 A N T <5 + 0 0 110 -4,-2.1 2,-0.3 1,-0.2 -3,-0.2 0.909 68.7 113.9 54.8 46.7 39.7 5.2 13.9 39 44 A V E < -B 34 0A 43 -5,-0.9 -5,-2.6 -7,-0.1 2,-0.3 -0.956 68.9-112.0-140.5 155.3 37.4 7.6 12.2 40 45 A Y E -B 33 0A 65 16,-0.4 16,-2.5 -2,-0.3 2,-0.3 -0.750 37.7-169.8 -89.4 140.8 33.7 8.3 12.3 41 46 A R E -BC 32 55A 60 -9,-2.6 -9,-3.3 -2,-0.3 2,-0.5 -0.949 23.1-145.1-134.6 154.2 31.7 7.5 9.2 42 47 A I E +BC 31 54A 0 12,-2.8 12,-2.4 -2,-0.3 2,-0.3 -0.978 31.4 176.5-116.2 121.5 28.3 8.0 7.7 43 48 A I E -BC 30 53A 72 -13,-2.6 -13,-2.9 -2,-0.5 2,-0.3 -0.948 18.7-179.4-131.1 150.6 27.1 5.1 5.6 44 49 A S E - C 0 52A 3 8,-1.8 8,-1.4 -2,-0.3 7,-1.0 -0.930 11.6-163.3-149.0 120.3 24.0 4.2 3.7 45 50 A L E + C 0 50A 121 -17,-0.4 2,-0.4 -2,-0.3 -17,-0.3 -0.888 10.6 177.9-110.4 138.5 23.7 0.9 1.7 46 51 A D E > - C 0 49A 48 3,-3.0 3,-1.8 -2,-0.4 2,-0.3 -0.861 65.4 -53.6-139.9 100.8 21.1 0.2 -0.9 47 52 A G T 3 S- 0 0 66 -2,-0.4 -1,-0.0 1,-0.3 0, 0.0 -0.548 121.9 -19.4 70.4-127.5 21.4 -3.2 -2.5 48 53 A S T 3 S+ 0 0 123 -2,-0.3 2,-0.4 -3,-0.1 -1,-0.3 0.219 121.3 98.4 -95.3 10.8 24.9 -3.5 -3.9 49 54 A K E < -C 46 0A 141 -3,-1.8 -3,-3.0 2,-0.0 2,-1.0 -0.849 61.3-154.6-106.8 136.3 25.4 0.3 -3.7 50 55 A A E +C 45 0A 65 -2,-0.4 -5,-0.2 -5,-0.2 3,-0.1 -0.819 21.8 177.4-100.7 88.0 27.1 2.3 -1.0 51 56 A I E S+ 0 0 13 -2,-1.0 2,-0.4 -7,-1.0 -6,-0.2 0.680 70.3 30.1 -72.7 -16.8 25.1 5.4 -1.8 52 57 A I E +C 44 0A 1 -8,-1.4 -8,-1.8 -3,-0.1 -1,-0.2 -0.984 57.8 157.0-141.6 131.3 26.8 7.3 1.1 53 58 A N E +C 43 0A 89 -2,-0.4 2,-0.5 -10,-0.2 -10,-0.2 -0.506 23.9 160.9-151.5 67.0 30.4 6.5 2.3 54 59 A S E -C 42 0A 0 -12,-2.4 -12,-2.8 22,-0.1 2,-0.5 -0.832 30.6-149.5-104.2 129.2 31.4 9.8 4.0 55 60 A T E -C 41 0A 18 -2,-0.5 2,-0.5 -14,-0.2 -14,-0.2 -0.821 26.9-121.7 -93.6 127.2 34.2 10.1 6.5 56 61 A I - 0 0 18 -16,-2.5 -16,-0.4 -2,-0.5 18,-0.1 -0.575 31.4-171.3 -74.8 121.9 33.6 12.8 9.1 57 62 A T > - 0 0 31 -2,-0.5 3,-2.1 -18,-0.1 45,-0.0 -0.847 34.2-116.9-110.1 145.5 36.3 15.5 9.0 58 63 A P T 3 S+ 0 0 109 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.693 115.4 54.4 -56.0 -18.7 36.7 18.3 11.6 59 64 A N T 3 S+ 0 0 132 2,-0.0 2,-0.3 43,-0.0 -3,-0.0 0.076 87.5 106.7-103.5 24.0 36.1 20.9 8.8 60 65 A M < - 0 0 12 -3,-2.1 2,-0.4 12,-0.0 14,-0.1 -0.772 51.3-162.3-101.0 148.5 32.9 19.3 7.7 61 66 A T - 0 0 82 -2,-0.3 2,-0.5 12,-0.3 12,-0.5 -0.989 14.6-146.7-136.4 143.0 29.5 20.9 8.4 62 67 A F E -F 72 0B 25 -2,-0.4 2,-0.5 10,-0.1 10,-0.2 -0.923 18.3-158.9-107.0 124.9 25.9 19.7 8.4 63 68 A T E -F 71 0B 74 8,-3.3 8,-2.3 -2,-0.5 2,-1.4 -0.898 14.1-146.1-109.0 128.2 23.3 22.4 7.3 64 69 A K + 0 0 92 -2,-0.5 6,-0.2 6,-0.2 -2,-0.0 -0.730 23.7 179.3 -88.8 87.2 19.7 22.1 8.2 65 70 A T - 0 0 58 -2,-1.4 2,-0.2 4,-0.5 -1,-0.2 0.855 59.7 -14.5 -59.9 -38.9 18.4 23.7 5.0 66 71 A S S S- 0 0 36 3,-2.0 3,-0.2 -3,-0.2 45,-0.0 -0.734 89.6 -66.9-146.9-165.0 14.7 23.4 6.0 67 72 A Q S S+ 0 0 118 -2,-0.2 24,-0.2 1,-0.2 25,-0.1 0.851 130.6 12.1 -62.5 -36.4 12.2 21.7 8.3 68 73 A K S S+ 0 0 64 43,-1.3 17,-3.1 23,-0.1 2,-0.4 0.137 113.9 79.1-131.4 21.8 12.9 18.2 6.9 69 74 A F E + G 0 84B 0 15,-0.2 -3,-2.0 -3,-0.2 -4,-0.5 -0.992 46.4 171.5-136.8 128.1 16.0 18.5 4.7 70 75 A G E - G 0 83B 0 13,-2.1 13,-3.0 -2,-0.4 2,-0.3 -0.896 7.6-172.9-129.9 162.2 19.7 18.6 5.7 71 76 A Q E -FG 63 82B 46 -8,-2.3 -8,-3.3 -2,-0.3 2,-0.3 -0.996 11.7-171.6-156.0 157.8 23.0 18.5 3.8 72 77 A W E -FG 62 81B 3 9,-1.9 9,-2.6 -2,-0.3 2,-0.3 -0.987 24.3-124.4-154.0 141.3 26.7 18.3 3.9 73 78 A A E - G 0 80B 60 -12,-0.5 2,-0.4 -2,-0.3 -12,-0.3 -0.633 18.4-166.6 -84.1 141.9 29.6 18.6 1.5 74 79 A D E >> - G 0 79B 3 5,-2.7 5,-1.9 -2,-0.3 4,-0.7 -0.896 4.8-171.8-130.6 99.7 32.0 15.7 1.2 75 80 A S T 45S+ 0 0 111 -2,-0.4 3,-0.2 1,-0.2 -1,-0.1 0.818 84.8 58.6 -63.2 -30.2 35.1 16.7 -0.7 76 81 A R T 45S+ 0 0 181 1,-0.2 -1,-0.2 -21,-0.2 -22,-0.1 0.929 111.6 39.4 -65.2 -44.0 36.4 13.1 -0.7 77 82 A A T 45S- 0 0 43 2,-0.2 -1,-0.2 -3,-0.1 -2,-0.2 0.528 109.0-130.1 -81.2 -6.4 33.3 11.9 -2.5 78 83 A N T <5S+ 0 0 147 -4,-0.7 2,-0.3 1,-0.2 -3,-0.2 0.891 73.6 80.0 58.6 44.4 33.4 15.0 -4.6 79 84 A T E S- 0 0 29 -19,-0.1 4,-1.6 1,-0.1 -1,-0.1 -0.979 70.4-114.5-156.4 164.4 10.0 14.9 10.4 88 93 A E H > S+ 0 0 94 -2,-0.3 4,-2.3 1,-0.2 5,-0.1 0.764 115.1 64.8 -72.7 -23.6 11.9 17.9 11.7 89 94 A H H > S+ 0 0 137 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.943 104.2 42.7 -62.1 -49.7 12.4 15.8 14.8 90 95 A H H > S+ 0 0 53 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.864 111.6 55.1 -65.8 -37.1 14.5 13.2 12.9 91 96 A L H X S+ 0 0 0 -4,-1.6 4,-2.3 -24,-0.2 -1,-0.2 0.903 108.9 50.3 -61.7 -40.1 16.3 15.9 11.0 92 97 A S H X S+ 0 0 28 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.903 109.2 46.9 -67.0 -45.4 17.3 17.4 14.4 93 98 A K H X S+ 0 0 60 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.867 112.3 52.7 -67.6 -31.4 18.7 14.3 16.0 94 99 A F H X S+ 0 0 0 -4,-1.9 4,-1.9 -5,-0.2 -2,-0.2 0.953 110.9 46.6 -66.2 -46.6 20.6 13.6 12.8 95 100 A A H X S+ 0 0 17 -4,-2.3 4,-1.7 1,-0.2 -2,-0.2 0.882 111.3 50.9 -61.5 -41.0 22.1 17.1 12.9 96 101 A E H X S+ 0 0 135 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.873 110.3 49.2 -67.1 -36.0 23.0 16.9 16.7 97 102 A K H X S+ 0 0 45 -4,-1.9 4,-3.2 2,-0.2 5,-0.3 0.878 104.8 59.4 -70.1 -35.5 24.8 13.5 16.2 98 103 A F H X S+ 0 0 2 -4,-1.9 4,-1.2 1,-0.2 -2,-0.2 0.940 111.3 40.6 -56.3 -47.6 26.7 14.9 13.2 99 104 A Q H X S+ 0 0 86 -4,-1.7 4,-2.6 2,-0.2 -1,-0.2 0.868 114.7 52.9 -69.7 -37.5 28.2 17.6 15.6 100 105 A E H < S+ 0 0 99 -4,-2.1 -2,-0.2 1,-0.2 -1,-0.2 0.956 113.9 40.2 -63.3 -51.6 28.6 15.1 18.4 101 106 A F H >< S+ 0 0 34 -4,-3.2 3,-0.5 1,-0.2 -1,-0.2 0.712 115.2 53.9 -71.6 -20.1 30.6 12.6 16.4 102 107 A K H 3< S+ 0 0 47 -4,-1.2 -2,-0.2 -5,-0.3 -1,-0.2 0.917 99.6 61.1 -76.7 -43.8 32.5 15.4 14.7 103 108 A E T 3< 0 0 142 -4,-2.6 -1,-0.2 -5,-0.1 -2,-0.2 0.415 360.0 360.0 -64.8 4.2 33.5 16.8 18.1 104 109 A A < 0 0 87 -3,-0.5 -2,-0.2 -5,-0.1 -3,-0.1 0.529 360.0 360.0-132.6 360.0 35.3 13.5 18.7 105 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 106 1001 B T 0 0 160 0, 0.0 -87,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 140.9 16.0 24.7 -2.6 107 1002 B P - 0 0 31 0, 0.0 2,-0.1 0, 0.0 -38,-0.0 -0.060 360.0 -93.1 -59.6 158.3 15.3 21.2 -1.2 108 1003 B P > - 0 0 24 0, 0.0 3,-1.8 0, 0.0 -88,-0.0 -0.489 68.9 -66.8 -71.2 145.9 13.5 18.5 -3.1 109 1004 B S T 3 S+ 0 0 108 1,-0.3 -25,-0.0 2,-0.2 0, 0.0 -0.471 115.4 17.4 -75.1 149.2 9.7 18.5 -2.4 110 1005 B P T 3 0 0 118 0, 0.0 -1,-0.3 0, 0.0 -42,-0.0 -0.824 360.0 360.0 -98.4 29.5 8.1 17.9 0.0 111 1006 B F < 0 0 51 -3,-1.8 -43,-1.3 -44,-0.1 -2,-0.2 0.620 360.0 360.0 -81.1 360.0 11.2 18.2 2.3