==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 19-NOV-99 1DFE . COMPND 2 MOLECULE: L36 RIBOSOMAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR T.HARD,A.RAK,P.ALLARD,L.KLOO,M.GARBER . 37 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3563.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 43.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 24.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 103 0, 0.0 2,-0.3 0, 0.0 35,-0.0 0.000 360.0 360.0 360.0 122.6 34.1 10.4 10.2 2 2 A K + 0 0 184 35,-0.1 2,-0.3 20,-0.0 20,-0.0 -0.989 360.0 170.1-147.0 135.5 30.8 11.0 8.3 3 3 A V - 0 0 77 -2,-0.3 2,-2.7 2,-0.2 34,-0.2 -0.962 48.5-100.9-141.3 159.2 30.0 11.9 4.7 4 4 A R S S+ 0 0 254 -2,-0.3 2,-0.4 32,-0.1 32,-0.0 -0.244 85.0 114.1 -76.1 56.1 26.9 12.1 2.4 5 5 A A - 0 0 37 -2,-2.7 32,-0.4 2,-0.0 2,-0.3 -0.988 45.4-172.6-131.3 133.3 27.8 8.8 0.9 6 6 A S - 0 0 107 -2,-0.4 30,-0.1 30,-0.1 -2,-0.1 -0.557 18.5-157.2-121.1 66.8 25.9 5.5 1.1 7 7 A V - 0 0 18 -2,-0.3 2,-0.3 16,-0.1 29,-0.1 -0.198 18.8-178.7 -47.3 113.7 28.2 3.0 -0.6 8 8 A K - 0 0 159 17,-0.1 7,-0.1 1,-0.1 17,-0.0 -0.868 35.2 -91.0-117.1 151.9 25.9 0.1 -1.7 9 9 A R - 0 0 180 -2,-0.3 3,-0.1 1,-0.1 -1,-0.1 -0.251 37.2-172.5 -58.4 148.4 26.9 -3.1 -3.4 10 10 A I + 0 0 90 1,-0.2 -1,-0.1 22,-0.1 2,-0.1 0.791 60.9 10.5-109.3 -60.6 26.8 -2.9 -7.2 11 11 A C S > S- 0 0 36 18,-0.1 3,-0.6 21,-0.0 -1,-0.2 -0.343 94.3 -81.0-109.0-167.6 27.4 -6.3 -8.7 12 12 A D T 3 S+ 0 0 156 1,-0.2 -3,-0.0 -2,-0.1 15,-0.0 0.157 122.2 56.3 -83.3 22.6 27.5 -9.9 -7.3 13 13 A K T 3 S+ 0 0 106 16,-0.0 15,-0.3 14,-0.0 -1,-0.2 0.531 79.4 96.0-127.7 -14.2 31.1 -9.4 -6.1 14 14 A C < - 0 0 10 -3,-0.6 2,-0.4 13,-0.2 13,-0.3 -0.537 52.3-164.3 -80.9 148.0 31.1 -6.3 -3.9 15 15 A K E -A 26 0A 144 11,-2.6 11,-2.0 -2,-0.2 2,-0.7 -0.990 16.7-134.6-133.7 128.3 30.8 -6.7 -0.1 16 16 A V E -A 25 0A 61 -2,-0.4 9,-0.3 9,-0.2 2,-0.2 -0.701 26.5-158.7 -83.7 115.7 29.9 -4.0 2.4 17 17 A I E -A 24 0A 50 7,-3.1 7,-1.2 -2,-0.7 2,-0.5 -0.528 5.3-142.9 -90.8 161.6 32.4 -4.2 5.4 18 18 A R E +A 23 0A 208 5,-0.2 5,-0.2 -2,-0.2 2,-0.2 -0.970 32.5 146.7-128.6 120.7 31.7 -2.8 8.9 19 19 A R - 0 0 158 3,-3.7 2,-1.4 -2,-0.5 3,-0.5 -0.474 62.7 -14.8-130.5-157.1 34.4 -1.2 11.0 20 20 A H S S- 0 0 151 1,-0.3 3,-0.1 -2,-0.2 -1,-0.1 -0.170 125.0 -51.5 -47.7 83.1 34.8 1.6 13.6 21 21 A G S S+ 0 0 76 -2,-1.4 -1,-0.3 1,-0.2 2,-0.3 0.686 126.3 109.5 54.5 10.8 31.4 3.2 12.8 22 22 A R - 0 0 96 -3,-0.5 -3,-3.7 -20,-0.0 2,-0.3 -0.780 55.2-155.5-115.2 161.7 32.8 3.0 9.3 23 23 A V E -AB 18 36A 12 13,-0.6 13,-1.2 -2,-0.3 2,-0.3 -0.985 4.9-163.2-136.0 148.0 31.8 0.9 6.3 24 24 A Y E -AB 17 35A 62 -7,-1.2 -7,-3.1 -2,-0.3 2,-0.5 -0.897 13.1-147.5-128.1 160.0 33.7 -0.2 3.2 25 25 A V E +AB 16 34A 0 9,-3.4 9,-1.4 -2,-0.3 2,-0.4 -0.832 23.8 176.2-128.2 93.5 32.7 -1.7 -0.2 26 26 A I E +A 15 0A 94 -11,-2.0 -11,-2.6 -2,-0.5 2,-0.3 -0.797 7.8 161.2-100.5 139.7 35.3 -4.1 -1.5 27 27 A C - 0 0 27 -2,-0.4 -13,-0.2 -13,-0.3 5,-0.1 -0.996 53.1-113.2-151.8 158.6 34.8 -6.0 -4.8 28 28 A E S S+ 0 0 144 -15,-0.3 -1,-0.1 -2,-0.3 5,-0.1 0.932 105.6 75.6 -58.8 -39.9 36.7 -7.9 -7.5 29 29 A N S > S- 0 0 55 1,-0.2 3,-1.4 -3,-0.1 -2,-0.2 -0.590 78.4-149.1 -74.2 125.0 35.6 -5.0 -9.8 30 30 A P G > S+ 0 0 87 0, 0.0 3,-1.6 0, 0.0 -1,-0.2 0.775 93.7 69.1 -67.1 -25.1 37.7 -2.0 -9.0 31 31 A K G 3 S+ 0 0 155 1,-0.3 -2,-0.1 -3,-0.0 -3,-0.1 0.693 97.7 53.2 -67.9 -14.2 34.8 0.3 -10.0 32 32 A H G < S+ 0 0 18 -3,-1.4 2,-1.7 -5,-0.1 -1,-0.3 0.267 72.7 118.0-104.3 13.8 33.0 -0.9 -6.8 33 33 A K < + 0 0 158 -3,-1.6 2,-0.2 -7,-0.1 -7,-0.2 -0.547 42.5 140.2 -81.0 85.7 35.8 -0.1 -4.4 34 34 A Q E -B 25 0A 77 -2,-1.7 -9,-3.4 -9,-1.4 2,-0.3 -0.639 35.7-157.3-117.8 179.3 33.9 2.5 -2.2 35 35 A R E -B 24 0A 129 -11,-0.3 -11,-0.3 -2,-0.2 -19,-0.0 -0.868 22.7-118.4-161.4 122.3 33.8 3.3 1.5 36 36 A Q E B 23 0A 68 -13,-1.2 -13,-0.6 -2,-0.3 -30,-0.1 -0.304 360.0 360.0 -60.7 143.8 31.1 5.1 3.6 37 37 A G 0 0 16 -32,-0.4 -2,-0.1 -34,-0.2 -35,-0.1 -0.310 360.0 360.0 82.2 360.0 32.3 8.3 5.3