==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 20-FEB-06 2DF0 . COMPND 2 MOLECULE: PEPTIDE YY; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.NYGAARD . 34 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3433.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 38.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 221 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 136.8 24.2 6.7 8.1 2 2 A K - 0 0 131 1,-0.0 0, 0.0 2,-0.0 0, 0.0 -0.945 360.0-133.3-130.3 151.2 24.3 6.3 4.3 3 3 A P - 0 0 63 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 0.248 59.5-104.5 -82.9 13.8 26.6 7.7 1.6 4 4 A E + 0 0 151 2,-0.0 3,-0.1 1,-0.0 -2,-0.0 0.992 68.8 152.8 55.8 68.1 23.5 8.6 -0.4 5 5 A A + 0 0 23 1,-0.2 2,-3.0 2,-0.1 3,-0.4 0.806 47.6 78.8 -96.6 -38.4 23.8 5.7 -2.8 6 6 A P + 0 0 75 0, 0.0 -1,-0.2 0, 0.0 9,-0.1 -0.284 63.5 107.7 -70.7 60.7 20.1 5.2 -3.9 7 7 A G S S+ 0 0 63 -2,-3.0 -2,-0.1 7,-0.1 3,-0.0 0.237 72.7 47.9-121.2 8.7 20.3 8.1 -6.3 8 8 A E S S- 0 0 150 -3,-0.4 -3,-0.0 6,-0.1 0, 0.0 0.618 123.0 -66.9-107.6 -91.2 20.4 6.2 -9.5 9 9 A D - 0 0 96 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.512 45.3-165.0-129.4 -60.6 17.7 3.6 -9.8 10 10 A A S S+ 0 0 20 -5,-0.1 -5,-0.0 1,-0.0 8,-0.0 0.735 70.2 82.4 77.9 25.0 18.5 0.9 -7.3 11 11 A S S S+ 0 0 93 4,-0.0 5,-0.1 5,-0.0 -1,-0.0 0.665 90.5 35.7-119.8 -61.2 16.2 -1.6 -8.9 12 12 A P S S- 0 0 95 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.923 145.1 -45.8 -63.4 -43.0 17.9 -3.3 -11.9 13 13 A E S > S+ 0 0 82 3,-0.0 4,-2.1 2,-0.0 5,-0.1 0.346 107.5 105.5-174.4 11.2 21.3 -3.3 -10.1 14 14 A E T 4 S+ 0 0 33 1,-0.2 -7,-0.1 2,-0.2 -6,-0.1 0.522 86.7 55.8 -82.2 -1.7 22.1 0.1 -8.4 15 15 A L T > S+ 0 0 75 2,-0.2 4,-1.8 3,-0.1 -1,-0.2 0.782 104.6 50.4 -92.3 -36.7 21.3 -1.6 -5.1 16 16 A N H > S+ 0 0 113 1,-0.2 4,-1.2 2,-0.2 3,-0.4 0.963 117.1 40.9 -59.5 -49.0 23.8 -4.4 -5.7 17 17 A R H X S+ 0 0 118 -4,-2.1 4,-2.6 2,-0.2 5,-0.3 0.497 103.0 72.0 -78.9 -1.7 26.3 -1.6 -6.5 18 18 A Y H > S+ 0 0 18 2,-0.2 4,-1.6 3,-0.2 -1,-0.2 0.928 108.0 33.7 -69.9 -46.7 24.7 0.2 -3.5 19 19 A Y H X S+ 0 0 141 -4,-1.8 4,-1.7 -3,-0.4 -2,-0.2 0.702 121.2 53.0 -76.9 -20.4 26.5 -2.3 -1.3 20 20 A A H X S+ 0 0 46 -4,-1.2 4,-2.9 2,-0.2 -2,-0.2 0.873 111.7 41.0 -84.0 -43.1 29.3 -2.4 -3.8 21 21 A S H X S+ 0 0 60 -4,-2.6 4,-2.6 2,-0.2 5,-0.2 0.864 118.3 50.5 -70.0 -35.1 30.0 1.3 -4.0 22 22 A L H X S+ 0 0 34 -4,-1.6 4,-2.6 -5,-0.3 -2,-0.2 0.919 114.1 44.0 -63.0 -44.6 29.4 1.2 -0.2 23 23 A R H X S+ 0 0 135 -4,-1.7 4,-3.4 2,-0.2 5,-0.2 0.886 113.5 50.0 -70.3 -39.4 31.9 -1.6 -0.0 24 24 A H H X S+ 0 0 147 -4,-2.9 4,-1.6 2,-0.2 -2,-0.2 0.928 114.9 44.1 -63.5 -45.3 34.4 0.0 -2.4 25 25 A Y H X S+ 0 0 120 -4,-2.6 4,-3.7 2,-0.2 5,-0.2 0.906 114.9 50.6 -62.6 -42.9 34.2 3.2 -0.4 26 26 A L H X S+ 0 0 86 -4,-2.6 4,-2.1 1,-0.2 -2,-0.2 0.970 109.8 47.8 -58.3 -58.4 34.4 1.1 2.8 27 27 A N H < S+ 0 0 82 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.808 120.0 42.4 -51.4 -34.4 37.5 -0.8 1.6 28 28 A L H >< S+ 0 0 92 -4,-1.6 3,-1.7 -5,-0.2 -2,-0.2 0.956 108.2 54.0 -76.7 -57.7 39.0 2.6 0.6 29 29 A V H >< S+ 0 0 62 -4,-3.7 3,-0.7 1,-0.3 4,-0.3 0.793 99.3 63.1 -55.2 -32.1 38.1 4.8 3.6 30 30 A T T 3< S+ 0 0 39 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.1 0.150 70.9 118.7 -77.9 23.4 39.7 2.4 6.0 31 31 A R T < S+ 0 0 210 -3,-1.7 -1,-0.2 1,-0.2 -2,-0.1 0.890 83.7 31.8 -55.5 -43.9 42.9 3.3 4.1 32 32 A Q S < S- 0 0 117 -3,-0.7 2,-3.0 1,-0.2 -1,-0.2 0.785 85.2-170.2 -83.8 -29.0 44.4 4.6 7.3 33 33 A R 0 0 183 -4,-0.3 -1,-0.2 1,-0.3 -2,-0.1 -0.376 360.0 360.0 66.3 -62.2 42.6 2.2 9.5 34 34 A Y 0 0 259 -2,-3.0 -1,-0.3 -3,-0.1 -2,-0.1 0.656 360.0 360.0-114.5 360.0 43.7 4.1 12.6