==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME 27-NOV-99 1DGZ . COMPND 2 MOLECULE: PROTEIN (L36 RIBOSOMAL PROTEIN); . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR T.HARD,A.RAK,P.ALLARD,L.KLOO,M.GARBER . 37 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3303.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 43.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 21.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 16.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 119 0, 0.0 2,-0.7 0, 0.0 36,-0.0 0.000 360.0 360.0 360.0 107.9 35.9 11.4 7.3 2 2 A K - 0 0 159 35,-0.0 2,-0.7 2,-0.0 35,-0.1 -0.875 360.0-145.8-112.5 104.1 32.3 12.4 6.6 3 3 A V + 0 0 64 -2,-0.7 33,-0.1 1,-0.2 34,-0.1 -0.526 60.4 109.0 -69.5 111.3 29.9 9.4 6.3 4 4 A R + 0 0 181 -2,-0.7 2,-0.4 1,-0.0 -1,-0.2 0.221 42.9 108.0-168.9 19.2 27.3 10.5 3.6 5 5 A A S S- 0 0 39 -3,-0.1 2,-2.1 30,-0.1 3,-0.1 -0.871 75.9-112.0-110.8 142.4 28.0 8.5 0.5 6 6 A S + 0 0 84 -2,-0.4 30,-0.0 1,-0.2 -1,-0.0 -0.440 47.3 164.4 -69.3 83.2 25.8 5.6 -0.9 7 7 A V + 0 0 10 -2,-2.1 -1,-0.2 27,-0.0 3,-0.2 0.587 22.2 136.6 -80.0 -8.6 28.4 2.9 -0.2 8 8 A K S S- 0 0 127 -3,-0.1 17,-0.1 1,-0.1 7,-0.0 -0.034 75.5 -81.4 -38.6 136.2 25.8 0.1 -0.6 9 9 A R - 0 0 160 1,-0.1 -1,-0.1 5,-0.1 7,-0.1 -0.116 43.0-154.8 -44.7 133.8 27.4 -2.7 -2.7 10 10 A I + 0 0 88 -3,-0.2 -1,-0.1 22,-0.1 -2,-0.1 0.973 68.9 21.2 -80.2 -64.0 27.1 -1.7 -6.4 11 11 A C S S- 0 0 40 18,-0.1 3,-0.4 1,-0.1 0, 0.0 -0.121 92.4 -93.8 -92.8-166.0 27.1 -5.1 -8.3 12 12 A D S S+ 0 0 141 1,-0.2 -1,-0.1 -2,-0.0 -3,-0.0 0.708 122.2 51.6 -84.2 -21.0 26.3 -8.6 -7.1 13 13 A K S S+ 0 0 113 2,-0.0 15,-0.4 14,-0.0 -1,-0.2 0.327 86.5 112.9 -98.4 10.0 30.0 -9.5 -6.2 14 14 A C - 0 0 18 -3,-0.4 2,-0.3 13,-0.2 13,-0.2 -0.238 50.2-158.6 -73.0 169.8 30.5 -6.4 -4.1 15 15 A K E -A 26 0A 125 11,-1.4 11,-2.1 -7,-0.0 2,-0.5 -0.967 7.5-146.4-153.7 133.5 31.0 -6.7 -0.3 16 16 A V E -A 25 0A 32 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.869 12.7-156.1-104.8 130.9 30.5 -4.1 2.5 17 17 A I E -A 24 0A 50 7,-0.9 7,-2.2 -2,-0.5 2,-0.5 -0.831 11.0-136.1-105.3 142.8 32.8 -4.2 5.5 18 18 A R E +A 23 0A 201 -2,-0.4 5,-0.3 5,-0.2 2,-0.2 -0.826 31.5 165.5 -99.5 130.3 31.8 -2.8 8.9 19 19 A R - 0 0 159 3,-3.5 2,-0.9 -2,-0.5 3,-0.3 -0.639 55.8 -35.1-128.1-172.5 34.3 -0.6 10.8 20 20 A H S S- 0 0 162 1,-0.3 3,-0.1 -2,-0.2 -1,-0.1 -0.192 122.8 -43.7 -47.8 89.9 34.3 1.8 13.8 21 21 A G S S+ 0 0 71 -2,-0.9 -1,-0.3 1,-0.2 2,-0.2 0.532 133.1 94.1 60.2 -1.8 30.9 3.3 13.1 22 22 A R - 0 0 72 -3,-0.3 -3,-3.5 15,-0.0 2,-0.3 -0.585 61.4-151.4-112.8 178.4 32.1 3.4 9.5 23 23 A V E -A 18 0A 21 13,-0.5 13,-1.8 -5,-0.3 2,-0.3 -0.923 4.0-151.2-143.7 168.3 31.7 0.9 6.6 24 24 A Y E -AB 17 35A 53 -7,-2.2 -7,-0.9 -2,-0.3 2,-0.3 -0.845 8.3-142.7-136.4 175.4 33.7 -0.1 3.4 25 25 A V E +AB 16 34A 1 9,-2.0 9,-1.6 -2,-0.3 2,-0.3 -0.787 24.4 167.0-145.1 99.4 33.1 -1.4 -0.1 26 26 A I E +A 15 0A 77 -11,-2.1 -11,-1.4 -2,-0.3 2,-0.3 -0.802 10.0 150.3-111.8 153.8 35.5 -3.9 -1.6 27 27 A C - 0 0 33 -2,-0.3 -13,-0.2 -13,-0.2 5,-0.1 -0.982 58.2-100.6-170.8 162.8 34.9 -6.0 -4.8 28 28 A E S S+ 0 0 151 -15,-0.4 -1,-0.1 -2,-0.3 -14,-0.1 0.923 105.4 78.9 -61.7 -38.8 36.5 -7.6 -7.8 29 29 A N S > S- 0 0 61 1,-0.2 3,-1.3 -3,-0.1 4,-0.2 -0.564 75.7-150.6 -72.3 124.7 35.5 -4.6 -9.9 30 30 A P G > S+ 0 0 89 0, 0.0 3,-1.5 0, 0.0 -1,-0.2 0.818 92.9 65.7 -66.8 -31.1 37.8 -1.8 -9.2 31 31 A K G 3 S+ 0 0 156 1,-0.3 -2,-0.1 -3,-0.0 -3,-0.1 0.622 99.0 55.6 -68.3 -7.9 35.1 0.8 -9.9 32 32 A H G < S+ 0 0 19 -3,-1.3 2,-1.6 -5,-0.1 -1,-0.3 0.457 70.9 114.8-103.8 0.1 33.3 -0.4 -6.8 33 33 A K < + 0 0 145 -3,-1.5 -7,-0.2 -4,-0.2 2,-0.2 -0.501 46.4 143.8 -72.1 93.3 36.2 0.0 -4.2 34 34 A Q E -B 25 0A 87 -9,-1.6 -9,-2.0 -2,-1.6 2,-0.3 -0.643 40.0-142.1-121.6-177.8 34.5 2.7 -2.1 35 35 A R E -B 24 0A 119 -11,-0.3 2,-1.1 -2,-0.2 -11,-0.3 -0.972 29.4-109.3-149.2 130.8 34.4 3.6 1.7 36 36 A Q 0 0 44 -13,-1.8 -13,-0.5 -2,-0.3 -33,-0.1 -0.409 360.0 360.0 -62.2 97.9 31.5 4.9 3.8 37 37 A G 0 0 32 -2,-1.1 -2,-0.2 -35,-0.1 -34,-0.1 -0.844 360.0 360.0 97.6 360.0 32.7 8.5 4.3