==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 15-MAR-06 2DGS . COMPND 2 MOLECULE: DAZ-ASSOCIATED PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7130.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 53.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 103 A G 0 0 85 0, 0.0 2,-0.2 0, 0.0 40,-0.1 0.000 360.0 360.0 360.0 125.2 -18.4 -12.3 11.4 2 104 A S - 0 0 93 2,-0.1 2,-0.5 0, 0.0 39,-0.0 -0.649 360.0-133.1-108.4 166.3 -18.0 -10.4 14.6 3 105 A S + 0 0 88 -2,-0.2 2,-0.1 1,-0.1 87,-0.0 -0.815 65.4 91.0-123.4 90.8 -17.7 -6.6 15.3 4 106 A G + 0 0 76 -2,-0.5 2,-0.4 0, 0.0 -2,-0.1 -0.391 33.6 146.1 178.0 97.1 -14.9 -5.9 17.7 5 107 A S + 0 0 118 1,-0.1 5,-0.0 -2,-0.1 0, 0.0 -0.968 12.4 169.9-144.7 124.9 -11.3 -5.1 16.9 6 108 A S + 0 0 123 -2,-0.4 -1,-0.1 3,-0.0 2,-0.0 0.828 50.1 105.2 -98.4 -44.6 -8.9 -2.7 18.7 7 109 A G - 0 0 51 1,-0.2 4,-0.1 4,-0.0 0, 0.0 -0.152 66.3-145.2 -43.3 107.2 -5.6 -3.6 17.0 8 110 A S S S+ 0 0 131 2,-0.1 -1,-0.2 -2,-0.0 2,-0.1 0.865 81.3 80.9 -43.8 -43.6 -5.1 -0.6 14.7 9 111 A K S S- 0 0 155 1,-0.1 2,-0.9 2,-0.1 -3,-0.0 -0.426 79.9-138.2 -68.9 139.3 -3.5 -2.9 12.2 10 112 A S + 0 0 32 -2,-0.1 2,-0.3 1,-0.1 76,-0.1 -0.819 22.5 177.6-104.1 96.3 -5.9 -4.9 10.1 11 113 A N + 0 0 27 -2,-0.9 48,-2.6 48,-0.2 2,-0.3 -0.130 41.8 124.6 -88.2 38.7 -4.7 -8.5 9.8 12 114 A K E -A 58 0A 70 -2,-0.3 74,-1.0 46,-0.3 2,-0.3 -0.791 41.7-164.2-102.4 143.3 -7.8 -9.4 7.7 13 115 A I E -AB 57 85A 0 44,-2.6 44,-2.0 -2,-0.3 2,-0.8 -0.921 21.1-122.3-126.6 152.1 -7.6 -11.0 4.3 14 116 A F E -AB 56 84A 67 70,-3.2 70,-2.3 -2,-0.3 2,-0.7 -0.825 27.2-171.4 -97.1 109.0 -10.2 -11.4 1.5 15 117 A V E +AB 55 83A 0 40,-2.0 40,-1.8 -2,-0.8 68,-0.2 -0.881 15.7 162.6-104.4 113.0 -10.7 -15.1 0.6 16 118 A G E +AB 54 82A 3 66,-2.8 66,-1.9 -2,-0.7 38,-0.2 -0.680 48.3 45.9-121.6 176.5 -12.8 -15.7 -2.5 17 119 A G S S+ 0 0 53 36,-0.8 37,-0.2 -2,-0.2 -1,-0.1 0.554 73.7 169.1 68.9 5.4 -13.5 -18.5 -4.9 18 120 A I - 0 0 9 35,-1.1 -1,-0.2 -3,-0.2 62,-0.1 -0.191 34.1-114.0 -52.8 138.0 -13.8 -20.8 -1.9 19 121 A P - 0 0 8 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 -0.156 20.1-111.0 -69.8 167.5 -15.2 -24.3 -2.8 20 122 A H S S+ 0 0 102 1,-0.2 33,-0.1 33,-0.1 -2,-0.1 0.297 118.2 50.8 -82.9 10.3 -18.6 -25.6 -1.6 21 123 A N S S+ 0 0 115 56,-0.1 2,-0.2 2,-0.0 -1,-0.2 0.557 89.0 91.8-118.4 -20.2 -16.7 -28.1 0.6 22 124 A C + 0 0 5 -3,-0.3 2,-0.2 54,-0.1 3,-0.0 -0.553 52.0 163.6 -80.5 142.2 -14.3 -25.7 2.3 23 125 A G > - 0 0 15 -2,-0.2 4,-3.0 1,-0.1 5,-0.2 -0.767 53.4 -68.8-143.1-171.9 -15.3 -24.3 5.7 24 126 A E H > S+ 0 0 102 -2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.941 128.1 49.6 -48.2 -57.9 -14.0 -22.5 8.8 25 127 A T H > S+ 0 0 87 2,-0.2 4,-3.2 1,-0.2 5,-0.2 0.942 116.7 40.8 -47.0 -60.1 -12.1 -25.6 10.0 26 128 A E H > S+ 0 0 53 2,-0.2 4,-2.0 1,-0.2 5,-0.4 0.975 111.2 55.8 -53.8 -63.4 -10.4 -26.1 6.7 27 129 A L H >X S+ 0 0 2 -4,-3.0 4,-1.8 1,-0.2 3,-0.8 0.877 116.5 36.9 -34.3 -62.5 -9.7 -22.5 6.0 28 130 A R H 3X S+ 0 0 99 -4,-2.5 4,-0.9 1,-0.3 3,-0.5 0.949 111.4 58.7 -59.0 -52.0 -7.9 -22.1 9.3 29 131 A E H 3< S+ 0 0 107 -4,-3.2 -1,-0.3 -5,-0.3 -2,-0.2 0.738 117.8 35.6 -50.5 -22.5 -6.3 -25.6 9.1 30 132 A Y H << S+ 0 0 47 -4,-2.0 3,-0.3 -3,-0.8 -1,-0.3 0.620 118.1 50.2-104.7 -20.6 -4.8 -24.3 5.8 31 133 A F H < S+ 0 0 0 -4,-1.8 4,-0.3 -3,-0.5 -2,-0.2 0.171 91.5 80.4-102.5 15.5 -4.3 -20.7 7.0 32 134 A K S < S+ 0 0 124 -4,-0.9 -1,-0.2 -5,-0.2 -3,-0.1 0.617 82.4 62.6 -94.1 -16.4 -2.5 -21.8 10.1 33 135 A K S S+ 0 0 120 -3,-0.3 -2,-0.1 -5,-0.2 -1,-0.1 0.856 98.6 54.3 -76.1 -36.7 0.8 -22.4 8.3 34 136 A F S S- 0 0 27 -4,-0.2 -1,-0.2 31,-0.0 2,-0.2 0.777 133.3 -68.6 -67.9 -26.6 1.2 -18.8 7.3 35 137 A G S S- 0 0 28 -4,-0.3 2,-0.4 28,-0.1 24,-0.0 -0.636 81.3 -31.1 177.4-114.7 0.8 -17.8 11.0 36 138 A V - 0 0 67 -2,-0.2 24,-1.3 25,-0.1 2,-0.7 -0.933 43.9-141.2-144.2 116.7 -2.1 -17.9 13.4 37 139 A V E +C 59 0A 14 -2,-0.4 22,-0.3 22,-0.2 3,-0.1 -0.663 24.0 170.6 -79.8 113.5 -5.8 -17.5 12.5 38 140 A T E + 0 0 61 20,-1.0 2,-0.3 -2,-0.7 21,-0.2 0.815 68.4 11.9 -90.1 -36.0 -7.5 -15.4 15.2 39 141 A E E -C 58 0A 88 19,-1.4 19,-2.4 2,-0.0 2,-0.4 -0.985 58.0-156.3-143.5 152.3 -10.8 -15.0 13.4 40 142 A V E -C 57 0A 16 -2,-0.3 2,-0.3 17,-0.2 17,-0.2 -0.875 12.9-165.9-134.8 102.0 -12.6 -16.4 10.4 41 143 A V E -C 56 0A 22 15,-0.9 15,-1.2 -2,-0.4 2,-0.3 -0.632 7.5-177.3 -87.9 143.9 -15.3 -14.3 8.7 42 144 A M E -C 55 0A 20 -2,-0.3 2,-0.4 13,-0.2 13,-0.2 -0.987 17.6-142.0-144.9 131.5 -17.6 -15.9 6.1 43 145 A I + 0 0 76 11,-1.1 9,-0.8 -2,-0.3 10,-0.4 -0.791 40.6 129.6 -96.1 131.9 -20.4 -14.4 4.0 44 146 A Y - 0 0 102 -2,-0.4 2,-0.7 7,-0.2 3,-0.1 -0.979 60.2 -85.7-169.6 164.5 -23.6 -16.3 3.5 45 147 A D >> - 0 0 82 5,-0.4 4,-2.7 -2,-0.3 3,-2.2 -0.731 32.2-141.8 -86.0 112.1 -27.4 -16.2 3.6 46 148 A A T 34 S+ 0 0 70 -2,-0.7 -1,-0.2 1,-0.3 0, 0.0 0.869 101.0 61.9 -33.8 -60.9 -28.6 -17.0 7.1 47 149 A E T 34 S+ 0 0 158 1,-0.3 -1,-0.3 2,-0.1 -2,-0.0 0.839 115.8 33.4 -36.1 -45.4 -31.6 -18.9 5.7 48 150 A K T <4 S- 0 0 122 -3,-2.2 -1,-0.3 2,-0.1 -2,-0.2 0.865 92.3-156.8 -81.4 -39.3 -29.0 -21.2 4.1 49 151 A Q < + 0 0 165 -4,-2.7 -3,-0.1 1,-0.2 -2,-0.1 0.960 53.3 104.2 59.7 54.3 -26.4 -20.9 6.9 50 152 A R S S- 0 0 110 -5,-0.3 2,-0.5 -27,-0.0 -5,-0.4 -0.933 77.1-104.7-165.4 138.7 -23.5 -21.9 4.7 51 153 A P - 0 0 20 0, 0.0 -7,-0.2 0, 0.0 -29,-0.1 -0.532 23.9-157.6 -69.8 114.2 -20.5 -20.2 3.0 52 154 A R - 0 0 153 -9,-0.8 -8,-0.1 -2,-0.5 3,-0.1 0.954 65.0 -65.6 -56.1 -54.4 -21.3 -19.9 -0.7 53 155 A G S S+ 0 0 11 -10,-0.4 -35,-1.1 1,-0.3 -36,-0.8 0.284 105.8 59.1 166.0 39.9 -17.6 -19.6 -1.7 54 156 A F E +A 16 0A 60 -11,-0.3 -11,-1.1 -38,-0.2 2,-0.3 -0.979 44.5 113.8-169.4 166.6 -16.1 -16.3 -0.4 55 157 A G E -AC 15 42A 1 -40,-1.8 -40,-2.0 -2,-0.3 2,-0.3 -0.994 49.1 -76.2 158.2-157.3 -15.4 -14.3 2.8 56 158 A F E -AC 14 41A 59 -15,-1.2 -15,-0.9 -2,-0.3 2,-0.3 -0.898 24.5-156.7-137.4 165.9 -12.6 -13.0 4.9 57 159 A I E -AC 13 40A 1 -44,-2.0 -44,-2.6 -2,-0.3 2,-0.3 -0.983 8.5-145.7-149.2 134.1 -10.1 -14.2 7.6 58 160 A T E -AC 12 39A 27 -19,-2.4 -19,-1.4 -2,-0.3 -20,-1.0 -0.768 15.7-162.3-101.3 145.1 -8.2 -12.4 10.3 59 161 A F E - C 0 37A 1 -48,-2.6 -22,-0.2 -2,-0.3 -48,-0.2 -0.530 28.5-115.6-114.5-177.7 -4.7 -13.4 11.5 60 162 A E S S+ 0 0 107 -24,-1.3 2,-0.4 1,-0.3 -23,-0.1 0.864 100.4 29.8 -86.9 -42.0 -2.5 -12.8 14.6 61 163 A D S >> S- 0 0 85 -25,-0.2 3,-1.6 1,-0.1 4,-0.6 -0.981 78.2-126.6-125.3 128.5 0.2 -10.8 12.9 62 164 A E H >> S+ 0 0 71 -2,-0.4 4,-1.3 1,-0.3 3,-0.6 0.803 106.0 75.0 -36.3 -37.7 -0.2 -8.5 9.8 63 165 A Q H >> S+ 0 0 130 1,-0.3 4,-2.0 2,-0.2 3,-0.5 0.919 85.7 59.1 -42.1 -60.5 2.6 -10.6 8.3 64 166 A S H <> S+ 0 0 4 -3,-1.6 4,-2.4 1,-0.3 -1,-0.3 0.870 101.0 57.1 -36.7 -53.4 0.4 -13.6 7.7 65 167 A V H