==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 15-MAR-06 2DGT . COMPND 2 MOLECULE: RNA-BINDING PROTEIN 30; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 92 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6459.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 22.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 17.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 68 A G 0 0 139 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-159.4 -15.9 7.5 18.0 2 69 A S - 0 0 98 1,-0.1 3,-0.1 78,-0.1 78,-0.1 -0.966 360.0-126.4-129.1 144.1 -14.4 10.7 16.6 3 70 A S - 0 0 104 -2,-0.4 2,-0.4 1,-0.2 -1,-0.1 0.934 42.1-145.1 -49.6 -53.9 -11.1 12.5 17.4 4 71 A G S S+ 0 0 54 -3,-0.1 2,-1.1 2,-0.0 -1,-0.2 -0.757 72.0 73.4 126.2 -87.0 -13.0 15.8 18.2 5 72 A S - 0 0 101 -2,-0.4 -2,-0.0 1,-0.2 -1,-0.0 -0.525 65.2-156.2 -69.7 98.9 -11.0 18.9 17.1 6 73 A S + 0 0 58 -2,-1.1 -1,-0.2 -3,-0.0 74,-0.0 0.865 69.2 94.7 -41.6 -45.6 -11.3 18.8 13.3 7 74 A G + 0 0 34 -3,-0.1 2,-0.3 78,-0.0 80,-0.1 -0.171 52.9 145.9 -52.1 140.5 -8.1 20.8 13.2 8 75 A K - 0 0 105 1,-0.1 -2,-0.0 0, 0.0 3,-0.0 -0.966 42.1-149.2-171.5 158.9 -5.0 18.8 12.7 9 76 A A S S+ 0 0 94 -2,-0.3 45,-0.2 2,-0.0 -1,-0.1 0.861 78.7 53.0-100.0 -65.7 -1.5 18.7 11.2 10 77 A S S S- 0 0 30 1,-0.1 2,-0.3 43,-0.1 42,-0.2 0.016 82.3-117.2 -64.1 177.4 -0.6 15.1 10.3 11 78 A T E -A 51 0A 21 40,-2.4 40,-2.2 42,-0.1 2,-0.4 -0.909 17.0-154.7-123.1 150.4 -2.8 12.8 8.3 12 79 A K E -A 50 0A 50 -2,-0.3 67,-1.8 38,-0.3 2,-0.4 -0.985 6.1-166.6-127.9 133.3 -4.6 9.6 9.1 13 80 A L E -AB 49 78A 0 36,-2.0 36,-2.6 -2,-0.4 2,-0.4 -0.958 8.2-149.9-121.6 136.2 -5.6 6.8 6.7 14 81 A H E -AB 48 77A 50 63,-3.2 63,-2.3 -2,-0.4 2,-0.4 -0.827 10.9-165.3-105.7 142.3 -7.9 3.9 7.4 15 82 A V E -AB 47 76A 0 32,-2.1 32,-2.3 -2,-0.4 2,-0.3 -0.953 3.1-168.7-127.5 146.5 -7.7 0.5 5.8 16 83 A G E +AB 46 75A 11 59,-1.0 59,-0.5 -2,-0.4 30,-0.3 -0.847 59.6 37.2-130.2 166.9 -10.2 -2.4 5.6 17 84 A N S S+ 0 0 80 28,-1.5 29,-0.2 -2,-0.3 52,-0.2 0.957 75.5 177.5 58.5 54.1 -10.3 -6.1 4.6 18 85 A I - 0 0 5 27,-1.1 -1,-0.1 -3,-0.2 55,-0.1 -0.404 27.6-107.3 -85.5 164.5 -6.8 -6.8 5.9 19 86 A S - 0 0 7 53,-0.1 3,-0.5 -2,-0.1 -1,-0.1 -0.563 16.0-126.3 -92.0 156.3 -5.0 -10.2 5.9 20 87 A P S S+ 0 0 116 0, 0.0 -1,-0.1 0, 0.0 50,-0.0 0.780 114.3 43.3 -69.8 -27.9 -4.4 -12.4 8.9 21 88 A T S S+ 0 0 107 49,-0.2 49,-0.1 2,-0.1 -3,-0.0 0.443 84.1 133.9 -96.4 -2.7 -0.7 -12.6 8.1 22 89 A C - 0 0 14 -3,-0.5 2,-0.4 47,-0.1 20,-0.1 -0.228 40.4-159.5 -51.2 128.9 -0.5 -8.9 7.3 23 90 A T >> - 0 0 67 1,-0.1 3,-2.3 18,-0.0 4,-2.0 -0.904 27.0-125.1-117.8 145.0 2.6 -7.3 9.0 24 91 A N H 3>>S+ 0 0 66 -2,-0.4 4,-2.4 1,-0.3 5,-0.5 0.876 112.9 61.9 -51.0 -41.1 3.3 -3.7 9.8 25 92 A Q H 345S+ 0 0 167 1,-0.2 4,-0.5 3,-0.2 -1,-0.3 0.743 110.6 42.0 -58.4 -22.6 6.5 -4.0 7.8 26 93 A E H <>5S+ 0 0 92 -3,-2.3 4,-2.5 3,-0.1 -2,-0.2 0.930 118.8 38.6 -88.3 -59.6 4.3 -4.7 4.8 27 94 A L H X5S+ 0 0 0 -4,-2.0 4,-1.9 2,-0.2 5,-0.2 0.955 119.0 48.8 -56.5 -54.5 1.5 -2.2 5.2 28 95 A R H >X5S+ 0 0 115 -4,-2.4 4,-2.7 1,-0.2 3,-0.9 0.960 112.1 47.1 -50.1 -62.4 3.7 0.6 6.4 29 96 A A H 3>> - 0 0 156 1,-0.1 4,-2.1 -43,-0.1 3,-1.0 -0.847 68.7-141.8-103.7 134.7 1.9 15.3 4.6 54 121 A A H 3> S+ 0 0 50 -2,-0.4 4,-3.0 1,-0.3 5,-0.5 0.937 100.2 65.9 -55.9 -50.9 -1.6 15.3 3.0 55 122 A E H 3> S+ 0 0 148 1,-0.3 4,-0.8 2,-0.2 -1,-0.3 0.810 111.1 38.4 -41.0 -35.5 -0.2 15.3 -0.5 56 123 A D H <> S+ 0 0 28 -3,-1.0 4,-3.2 2,-0.2 -1,-0.3 0.871 115.2 51.8 -84.6 -41.9 1.2 11.9 0.4 57 124 A A H X S+ 0 0 1 -4,-2.1 4,-1.1 2,-0.2 -2,-0.2 0.956 109.7 48.5 -59.5 -53.6 -1.8 10.7 2.4 58 125 A V H X S+ 0 0 86 -4,-3.0 4,-2.0 1,-0.2 3,-0.4 0.896 115.8 45.3 -54.2 -43.5 -4.3 11.5 -0.3 59 126 A E H X S+ 0 0 114 -4,-0.8 4,-2.1 -5,-0.5 5,-0.4 0.956 102.3 62.5 -66.0 -52.1 -2.2 9.8 -2.9 60 127 A A H X S+ 0 0 0 -4,-3.2 4,-1.9 1,-0.2 -1,-0.2 0.768 110.8 44.4 -44.7 -27.7 -1.5 6.7 -0.8 61 128 A I H X S+ 0 0 20 -4,-1.1 4,-2.7 -3,-0.4 -2,-0.2 0.960 107.2 51.6 -82.4 -62.9 -5.3 6.2 -1.0 62 129 A R H < S+ 0 0 218 -4,-2.0 -2,-0.2 1,-0.2 -3,-0.1 0.722 123.6 37.0 -47.8 -21.0 -6.0 6.9 -4.7 63 130 A G H < S+ 0 0 30 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.857 122.9 37.4 -98.6 -48.7 -3.3 4.3 -5.2 64 131 A L H >< S+ 0 0 4 -4,-1.9 3,-1.1 -5,-0.4 2,-0.6 0.407 89.8 119.7 -84.2 2.4 -3.8 1.8 -2.4 65 132 A D T 3< S- 0 0 68 -4,-2.7 10,-0.2 1,-0.3 -4,-0.1 -0.582 91.5 -8.4 -73.4 116.3 -7.5 2.2 -2.8 66 133 A N T 3 S+ 0 0 72 8,-1.3 2,-0.5 -2,-0.6 -1,-0.3 0.939 96.5 153.0 62.5 48.9 -9.0 -1.2 -3.7 67 134 A T E < -D 74 0B 37 -3,-1.1 7,-1.2 7,-1.0 2,-0.6 -0.949 55.1-110.9-116.0 124.8 -5.6 -2.8 -4.2 68 135 A E E -D 73 0B 137 -2,-0.5 2,-0.5 5,-0.2 5,-0.3 -0.307 46.1-177.6 -53.4 99.9 -5.1 -6.6 -3.8 69 136 A F E > -D 72 0B 15 3,-2.5 3,-1.8 -2,-0.6 -47,-0.1 -0.906 64.3 -10.9-109.5 130.1 -3.0 -6.5 -0.6 70 137 A Q T 3 S- 0 0 56 -2,-0.5 -1,-0.2 1,-0.3 -49,-0.2 0.770 133.3 -53.0 56.6 25.8 -1.6 -9.7 0.9 71 138 A G T 3 S+ 0 0 53 -3,-0.2 2,-0.4 1,-0.2 -1,-0.3 -0.110 130.6 78.9 102.9 -36.0 -3.9 -11.6 -1.5 72 139 A K E < S-D 69 0B 81 -3,-1.8 -3,-2.5 -4,-0.1 2,-0.3 -0.849 82.4-116.0-109.9 144.5 -7.1 -9.7 -0.5 73 140 A R E -D 68 0B 111 -2,-0.4 2,-0.3 -5,-0.3 -5,-0.2 -0.587 30.0-158.4 -79.3 135.1 -8.1 -6.2 -1.6 74 141 A M E -D 67 0B 0 -7,-1.2 -8,-1.3 -2,-0.3 -7,-1.0 -0.880 14.5-126.3-116.0 147.5 -8.3 -3.6 1.1 75 142 A H E -B 16 0A 93 -59,-0.5 -59,-1.0 -2,-0.3 2,-0.5 -0.821 24.4-165.6 -95.8 119.4 -10.3 -0.3 1.2 76 143 A V E +B 15 0A 2 -2,-0.6 2,-0.3 -61,-0.2 -61,-0.2 -0.900 23.2 139.1-108.4 129.6 -8.2 2.8 2.0 77 144 A Q E -B 14 0A 109 -63,-2.3 -63,-3.2 -2,-0.5 2,-0.4 -0.907 58.1 -55.0-153.4 178.9 -9.8 6.1 2.9 78 145 A L E -B 13 0A 91 -2,-0.3 -65,-0.2 -65,-0.2 3,-0.0 -0.494 41.0-150.1 -67.2 119.4 -9.6 9.1 5.2 79 146 A S S S+ 0 0 45 -67,-1.8 2,-0.5 -2,-0.4 -1,-0.2 0.958 84.4 36.8 -53.3 -57.9 -9.6 7.9 8.8 80 147 A T S S- 0 0 56 -68,-0.4 2,-0.5 -3,-0.1 -1,-0.1 -0.857 83.0-136.2-103.5 131.6 -11.3 11.0 10.2 81 148 A S - 0 0 97 -2,-0.5 2,-0.6 -3,-0.0 -2,-0.0 -0.730 15.2-159.1 -88.6 127.5 -14.0 12.8 8.2 82 149 A R + 0 0 117 -2,-0.5 3,-0.1 1,-0.2 -2,-0.0 -0.924 26.0 156.0-111.2 116.8 -13.8 16.6 8.1 83 150 A L + 0 0 170 -2,-0.6 2,-0.5 1,-0.2 -1,-0.2 0.809 66.7 48.5-102.6 -45.6 -16.9 18.5 7.3 84 151 A R S S- 0 0 215 2,-0.0 -1,-0.2 0, 0.0 2,-0.2 -0.870 76.5-144.5-103.7 128.0 -16.2 21.9 8.8 85 152 A T - 0 0 118 -2,-0.5 2,-0.4 -3,-0.1 -78,-0.0 -0.591 11.9-162.9 -89.5 151.0 -12.9 23.6 8.2 86 153 A A - 0 0 61 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.997 15.5-167.1-138.4 132.2 -11.1 25.8 10.7 87 154 A S - 0 0 137 -2,-0.4 -1,-0.2 -80,-0.1 0, 0.0 0.966 47.0-109.2 -79.1 -60.1 -8.3 28.3 10.3 88 155 A G - 0 0 54 2,-0.0 3,-0.1 -81,-0.0 -2,-0.0 0.537 29.0-148.8 123.8 83.4 -7.2 28.8 13.9 89 156 A P - 0 0 120 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 -0.130 36.0 -78.0 -69.7 169.9 -7.9 32.1 15.7 90 157 A S - 0 0 115 1,-0.1 -2,-0.0 2,-0.1 0, 0.0 -0.111 37.0-176.0 -64.2 166.6 -5.7 33.6 18.4 91 158 A S 0 0 122 -3,-0.1 -1,-0.1 1,-0.0 -3,-0.0 0.569 360.0 360.0-132.2 -44.8 -5.6 32.2 22.0 92 159 A G 0 0 115 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.164 360.0 360.0 -44.1 360.0 -3.4 34.4 24.1