==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 16-MAR-06 2DGW . COMPND 2 MOLECULE: PROBABLE RNA-BINDING PROTEIN 19; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6472.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 284 A G 0 0 121 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 72.6 -16.2 17.1 -25.1 2 285 A S + 0 0 133 1,-0.2 2,-0.1 0, 0.0 0, 0.0 0.901 360.0 155.0 61.2 42.3 -12.7 18.6 -25.7 3 286 A S + 0 0 119 2,-0.0 -1,-0.2 0, 0.0 0, 0.0 -0.429 10.7 136.4 -95.2 172.2 -11.9 18.4 -22.0 4 287 A G + 0 0 66 -2,-0.1 2,-0.3 1,-0.1 0, 0.0 0.145 11.1 147.3 145.7 92.4 -8.5 18.2 -20.3 5 288 A S - 0 0 117 2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 -0.886 45.1-118.8-150.1 113.4 -7.4 20.1 -17.2 6 289 A S + 0 0 140 -2,-0.3 2,-0.3 1,-0.0 -2,-0.0 -0.171 39.6 170.5 -49.9 136.2 -5.0 18.8 -14.5 7 290 A G - 0 0 50 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.798 40.9-105.0-158.4 111.2 -6.7 18.7 -11.1 8 291 A T - 0 0 136 -2,-0.3 2,-0.2 1,-0.1 0, 0.0 0.013 43.6-150.7 -34.5 125.1 -5.4 17.2 -7.9 9 292 A T - 0 0 62 76,-0.2 2,-0.9 1,-0.1 78,-0.1 -0.608 29.6 -80.9-102.9 164.8 -7.3 13.9 -7.3 10 293 A C - 0 0 94 -2,-0.2 49,-0.1 76,-0.1 -1,-0.1 -0.508 56.6-115.2 -67.6 102.4 -8.3 12.1 -4.1 11 294 A H - 0 0 38 -2,-0.9 46,-1.1 47,-0.2 2,-0.3 -0.033 42.2-175.0 -38.9 132.0 -5.1 10.2 -3.2 12 295 A T E -AB 56 84A 2 72,-0.6 72,-2.1 44,-0.2 2,-0.3 -0.997 13.5-156.0-139.7 142.4 -5.7 6.5 -3.4 13 296 A V E -AB 55 83A 0 42,-2.9 42,-2.6 -2,-0.3 2,-0.4 -0.874 7.0-146.8-118.5 151.1 -3.6 3.4 -2.6 14 297 A K E -AB 54 82A 29 68,-2.5 68,-1.8 -2,-0.3 2,-0.4 -0.943 8.4-165.3-119.6 138.5 -3.8 -0.1 -3.9 15 298 A L E +AB 53 81A 2 38,-1.4 38,-1.1 -2,-0.4 2,-0.3 -0.983 12.5 170.3-126.4 128.5 -3.0 -3.3 -2.0 16 299 A R E + B 0 80A 80 64,-0.9 64,-1.6 -2,-0.4 36,-0.2 -0.882 47.9 60.2-131.9 163.4 -2.5 -6.8 -3.5 17 300 A G + 0 0 13 -2,-0.3 59,-0.2 1,-0.3 -1,-0.1 0.760 67.2 148.3 91.0 28.2 -1.3 -10.2 -2.4 18 301 A A - 0 0 7 -3,-0.2 33,-0.6 1,-0.1 -1,-0.3 -0.706 42.6-122.1 -98.2 148.4 -4.0 -10.7 0.3 19 302 A P - 0 0 22 0, 0.0 3,-0.4 0, 0.0 32,-0.2 0.180 32.2 -97.6 -69.7-165.9 -5.4 -14.1 1.3 20 303 A F S S+ 0 0 131 1,-0.2 29,-0.1 55,-0.1 -2,-0.0 0.590 119.6 59.5 -93.2 -14.0 -9.0 -15.2 1.1 21 304 A N S S+ 0 0 144 2,-0.0 2,-0.3 54,-0.0 -1,-0.2 -0.009 79.5 125.4-102.7 27.6 -9.6 -14.5 4.8 22 305 A V + 0 0 3 -3,-0.4 2,-0.2 27,-0.1 27,-0.1 -0.675 32.3 169.1 -90.4 141.8 -8.7 -10.8 4.5 23 306 A T > - 0 0 70 -2,-0.3 4,-1.7 1,-0.0 5,-0.2 -0.795 53.1 -81.5-139.3-179.0 -11.1 -8.1 5.6 24 307 A E H > S+ 0 0 124 -2,-0.2 4,-2.2 1,-0.2 5,-0.1 0.850 124.9 58.9 -55.3 -35.9 -11.2 -4.3 6.2 25 308 A K H > S+ 0 0 145 2,-0.2 4,-2.5 1,-0.2 5,-0.3 0.975 101.9 50.2 -58.1 -59.4 -9.6 -5.0 9.6 26 309 A N H > S+ 0 0 57 1,-0.3 4,-2.1 2,-0.2 -1,-0.2 0.895 111.0 51.0 -46.1 -47.7 -6.5 -6.6 8.2 27 310 A V H X S+ 0 0 0 -4,-1.7 4,-3.1 2,-0.2 5,-0.3 0.912 109.1 50.8 -58.3 -44.9 -6.1 -3.6 5.8 28 311 A M H X S+ 0 0 62 -4,-2.2 4,-2.8 -3,-0.3 -2,-0.2 0.948 113.1 43.8 -58.5 -52.0 -6.4 -1.2 8.7 29 312 A E H < S+ 0 0 148 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.804 115.9 50.6 -64.1 -29.3 -3.8 -2.9 10.8 30 313 A F H < S+ 0 0 20 -4,-2.1 -2,-0.2 -5,-0.3 -1,-0.2 0.888 117.5 36.9 -75.5 -41.3 -1.6 -3.2 7.7 31 314 A L H >< S+ 0 0 1 -4,-3.1 3,-1.1 -5,-0.2 -2,-0.2 0.749 108.4 144.8 -81.7 -25.8 -1.9 0.5 6.8 32 315 A A T 3< + 0 0 36 -4,-2.8 3,-0.1 1,-0.4 -3,-0.1 0.109 42.1 45.7 -46.4 166.6 -1.8 1.6 10.4 33 316 A P T 3 S+ 0 0 135 0, 0.0 -1,-0.4 0, 0.0 -2,-0.1 -0.988 109.9 82.2 -69.7 -3.6 -1.1 3.4 12.4 34 317 A L S < S- 0 0 14 -3,-1.1 -3,-0.1 28,-0.1 29,-0.0 -0.076 72.2-141.9 -53.2 156.3 -2.5 5.5 9.5 35 318 A K - 0 0 153 -3,-0.1 23,-0.3 -4,-0.1 -1,-0.1 -0.891 15.1-161.5-130.8 102.7 -6.3 5.9 9.3 36 319 A P - 0 0 12 0, 0.0 21,-0.3 0, 0.0 3,-0.1 0.007 21.2-127.5 -69.8-179.1 -7.9 5.9 5.9 37 320 A V S S+ 0 0 101 19,-2.4 2,-0.3 1,-0.3 20,-0.2 0.788 86.0 0.8-100.7 -39.2 -11.4 7.2 5.0 38 321 A A E -C 56 0A 47 18,-0.7 18,-2.1 2,-0.0 2,-0.8 -0.941 57.0-150.5-156.1 129.9 -12.8 4.1 3.2 39 322 A I E -C 55 0A 23 -2,-0.3 2,-0.6 16,-0.2 16,-0.2 -0.845 17.2-170.9-105.8 99.8 -11.4 0.7 2.4 40 323 A R E -C 54 0A 136 14,-3.1 14,-2.7 -2,-0.8 2,-0.5 -0.805 12.8-146.1 -94.0 118.6 -13.0 -0.7 -0.8 41 324 A I E -C 53 0A 24 -2,-0.6 2,-0.6 12,-0.2 12,-0.2 -0.724 20.6-119.4 -87.1 124.4 -12.2 -4.4 -1.5 42 325 A V E - 0 0 35 10,-1.5 2,-0.8 -2,-0.5 8,-0.6 -0.476 28.8-162.2 -64.9 109.3 -11.8 -5.3 -5.2 43 326 A R E -C 49 0A 142 -2,-0.6 4,-0.3 6,-0.1 6,-0.2 -0.831 13.3-137.9-100.0 103.5 -14.5 -7.9 -5.8 44 327 A N > - 0 0 49 4,-2.2 3,-2.0 -2,-0.8 4,-0.1 0.150 38.2 -83.8 -47.2 173.4 -13.7 -9.8 -9.0 45 328 A A T 3 S+ 0 0 100 1,-0.3 2,-0.4 2,-0.1 -1,-0.1 0.934 134.7 41.5 -47.7 -56.4 -16.5 -10.6 -11.5 46 329 A H T 3 S- 0 0 171 1,-0.1 -1,-0.3 2,-0.1 -2,-0.2 -0.113 129.2 -96.9 -86.1 38.1 -17.6 -13.7 -9.5 47 330 A G S < S+ 0 0 45 -3,-2.0 2,-0.3 -2,-0.4 -2,-0.1 0.933 74.2 143.2 44.6 87.9 -17.1 -11.8 -6.2 48 331 A N - 0 0 69 -4,-0.1 -4,-2.2 -6,-0.1 2,-1.3 -0.944 55.8-119.1-158.2 133.0 -13.6 -12.8 -5.2 49 332 A K E + C 0 43A 44 -2,-0.3 2,-1.1 -6,-0.2 -6,-0.1 -0.586 33.1 179.9 -75.5 95.2 -10.7 -11.1 -3.4 50 333 A T E - 0 0 77 -2,-1.3 -1,-0.1 -8,-0.6 -30,-0.1 -0.616 63.7 -73.5 -98.4 74.3 -7.9 -11.3 -6.1 51 334 A G E S+ 0 0 14 -2,-1.1 2,-0.2 -33,-0.6 -1,-0.1 0.893 101.4 113.5 35.9 70.4 -5.1 -9.5 -4.3 52 335 A Y E + 0 0 83 -36,-0.2 -10,-1.5 -10,-0.1 2,-0.3 -0.789 32.3 166.9-170.1 121.9 -6.6 -6.0 -4.7 53 336 A I E -AC 15 41A 4 -38,-1.1 -38,-1.4 -2,-0.2 2,-0.6 -0.930 22.3-147.7-145.3 117.1 -7.9 -3.5 -2.2 54 337 A F E -AC 14 40A 35 -14,-2.7 -14,-3.1 -2,-0.3 2,-0.4 -0.736 21.2-178.4 -87.5 121.4 -8.6 0.2 -2.9 55 338 A V E -AC 13 39A 0 -42,-2.6 -42,-2.9 -2,-0.6 2,-0.2 -0.976 7.7-161.1-124.4 132.1 -8.1 2.5 0.1 56 339 A D E -AC 12 38A 45 -18,-2.1 -19,-2.4 -2,-0.4 -18,-0.7 -0.700 5.4-163.6-107.9 161.0 -8.6 6.2 0.2 57 340 A F - 0 0 11 -46,-1.1 3,-0.1 -21,-0.3 -46,-0.0 -0.884 23.4-131.4-138.1 168.8 -7.3 8.8 2.6 58 341 A S S S+ 0 0 99 -23,-0.3 2,-0.3 -2,-0.3 -47,-0.2 0.949 90.0 32.4 -85.2 -62.2 -8.0 12.4 3.8 59 342 A N S > S- 0 0 69 1,-0.1 4,-1.0 -49,-0.1 -1,-0.2 -0.713 78.7-123.4 -99.5 150.0 -4.6 14.1 3.6 60 343 A E H >> S+ 0 0 65 -2,-0.3 4,-2.9 1,-0.2 3,-0.8 0.907 107.0 66.9 -54.7 -45.3 -1.8 13.2 1.2 61 344 A E H 3> S+ 0 0 115 1,-0.3 4,-3.0 2,-0.2 5,-0.4 0.917 95.1 54.4 -40.2 -64.2 0.6 12.5 4.1 62 345 A E H 3> S+ 0 0 41 1,-0.2 4,-1.3 2,-0.2 -1,-0.3 0.859 114.2 43.3 -39.4 -46.2 -1.4 9.5 5.2 63 346 A V H X S+ 0 0 96 -4,-3.0 4,-0.9 -5,-0.3 3,-0.6 0.803 99.9 68.9 -73.9 -30.1 3.4 7.2 4.5 66 349 A A H 3< S+ 0 0 1 -4,-1.3 3,-0.4 -3,-0.4 -1,-0.2 0.848 94.9 56.4 -56.7 -35.6 1.3 4.3 3.3 67 350 A L H 3< S+ 0 0 59 -4,-1.3 -1,-0.3 -3,-0.3 -2,-0.2 0.858 92.1 71.2 -65.5 -35.8 3.9 3.6 0.6 68 351 A K H << S+ 0 0 146 -4,-0.6 2,-2.9 -3,-0.6 -1,-0.2 0.905 82.6 73.1 -45.9 -50.3 6.6 3.3 3.3 69 352 A C S < S+ 0 0 38 -4,-0.9 3,-0.3 -3,-0.4 2,-0.3 -0.383 75.1 149.5 -69.1 72.2 5.1 0.0 4.5 70 353 A N + 0 0 88 -2,-2.9 10,-0.1 1,-0.2 -3,-0.0 -0.720 50.4 22.6-107.7 158.9 6.4 -1.9 1.5 71 354 A R S S+ 0 0 184 8,-0.4 -1,-0.2 -2,-0.3 2,-0.1 0.915 88.3 154.9 54.2 46.7 7.5 -5.5 1.1 72 355 A E E -D 79 0B 69 7,-0.6 7,-1.8 -3,-0.3 2,-0.4 -0.451 38.1-137.4 -98.6 173.8 5.3 -6.5 4.1 73 356 A Y E +D 78 0B 188 5,-0.2 2,-0.3 -2,-0.1 5,-0.2 -0.947 30.6 154.0-139.2 116.0 3.7 -9.8 5.1 74 357 A M E > +D 77 0B 27 3,-1.1 2,-1.8 -2,-0.4 3,-0.8 -0.996 64.0 4.5-142.1 146.0 0.2 -10.2 6.5 75 358 A G T 3 S- 0 0 66 -2,-0.3 3,-0.1 1,-0.2 -55,-0.1 -0.176 127.2 -57.2 78.0 -46.8 -2.4 -13.0 6.6 76 359 A G T 3 S+ 0 0 61 -2,-1.8 2,-0.3 1,-0.4 -1,-0.2 0.507 111.8 73.8 141.7 34.9 0.1 -15.3 4.9 77 360 A R E < S-D 74 0B 151 -3,-0.8 -3,-1.1 -58,-0.0 -1,-0.4 -0.981 82.0 -86.5-164.3 156.0 1.2 -13.8 1.6 78 361 A Y E -D 73 0B 135 -2,-0.3 2,-0.4 -5,-0.2 -5,-0.2 -0.482 42.0-153.6 -70.7 133.5 3.5 -11.1 0.1 79 362 A I E -D 72 0B 1 -7,-1.8 -7,-0.6 -2,-0.2 2,-0.4 -0.870 8.2-163.9-112.0 143.7 1.8 -7.7 -0.2 80 363 A E E -B 16 0A 57 -64,-1.6 -64,-0.9 -2,-0.4 2,-0.3 -0.951 7.0-156.1-131.0 113.2 2.7 -5.0 -2.6 81 364 A V E -B 15 0A 15 -2,-0.4 2,-0.3 -66,-0.2 -66,-0.2 -0.656 13.8-177.8 -88.7 141.9 1.5 -1.4 -2.1 82 365 A F E -B 14 0A 73 -68,-1.8 -68,-2.5 -2,-0.3 2,-0.7 -1.000 27.3-123.3-141.8 141.5 1.2 1.0 -5.1 83 366 A R E -B 13 0A 110 -2,-0.3 2,-1.1 -70,-0.2 -70,-0.2 -0.747 22.4-143.5 -87.7 114.8 0.2 4.7 -5.4 84 367 A E E -B 12 0A 58 -72,-2.1 -72,-0.6 -2,-0.7 -1,-0.0 -0.660 11.4-167.5 -81.0 100.2 -2.8 5.1 -7.8 85 368 A K S S+ 0 0 194 -2,-1.1 -76,-0.2 1,-0.2 -1,-0.2 0.934 87.0 50.9 -50.8 -53.1 -2.1 8.3 -9.6 86 369 A S S S- 0 0 81 1,-0.2 -1,-0.2 -3,-0.1 -76,-0.1 0.951 90.1-164.7 -50.7 -58.1 -5.6 8.5 -11.0 87 370 A G + 0 0 2 -75,-0.1 -1,-0.2 -78,-0.1 2,-0.1 -0.825 54.3 62.7 112.0 -95.8 -7.2 8.0 -7.6 88 371 A P + 0 0 88 0, 0.0 3,-0.1 0, 0.0 -76,-0.1 -0.382 44.9 160.2 -69.8 144.9 -10.9 7.0 -7.9 89 372 A S + 0 0 55 1,-0.1 2,-0.4 -2,-0.1 -3,-0.0 0.591 45.7 91.7-130.1 -48.8 -11.8 3.7 -9.6 90 373 A S 0 0 73 -50,-0.0 -1,-0.1 0, 0.0 -50,-0.0 -0.388 360.0 360.0 -59.0 111.6 -15.3 2.7 -8.6 91 374 A G 0 0 124 -2,-0.4 0, 0.0 -3,-0.1 0, 0.0 -0.445 360.0 360.0 69.6 360.0 -17.6 4.2 -11.2