==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 29-MAR-06 2DID . COMPND 2 MOLECULE: TRIPARTITE MOTIF PROTEIN 39; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4375.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 41.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 17.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.9 -11.4 -21.9 -0.9 2 2 A S + 0 0 146 2,-0.0 2,-0.2 0, 0.0 0, 0.0 0.940 360.0 38.4 -49.9 -55.5 -7.7 -21.0 -0.7 3 3 A S - 0 0 75 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.623 64.0-165.9 -98.1 158.1 -8.4 -17.3 -1.3 4 4 A G S S+ 0 0 74 -2,-0.2 2,-0.6 1,-0.1 -1,-0.1 0.829 77.2 11.9-104.9 -68.4 -11.3 -15.2 0.0 5 5 A S - 0 0 119 3,-0.1 2,-1.8 0, 0.0 3,-0.4 -0.799 64.2-168.5-119.4 88.8 -11.6 -11.9 -1.8 6 6 A S + 0 0 112 -2,-0.6 3,-0.1 1,-0.2 -3,-0.0 -0.545 51.2 107.5 -77.7 83.0 -9.3 -11.9 -4.9 7 7 A G S S- 0 0 61 -2,-1.8 2,-0.3 1,-0.3 -1,-0.2 0.688 78.9 -15.6-120.7 -63.8 -9.5 -8.2 -5.7 8 8 A E - 0 0 131 -3,-0.4 -1,-0.3 2,-0.0 11,-0.1 -0.992 58.2-121.0-149.3 152.8 -6.3 -6.2 -4.9 9 9 A S - 0 0 81 9,-0.4 9,-1.1 -2,-0.3 2,-0.3 -0.111 22.1-133.1 -82.6-175.5 -3.1 -6.7 -2.9 10 10 A L B -A 17 0A 87 7,-0.2 7,-0.2 20,-0.0 5,-0.1 -0.964 27.6 -98.4-147.9 126.6 -1.8 -4.5 -0.1 11 11 A C > - 0 0 7 5,-1.8 4,-1.8 -2,-0.3 18,-0.1 -0.056 28.1-131.7 -42.0 134.3 1.7 -3.1 0.5 12 12 A P T 4 S+ 0 0 119 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.505 107.6 26.6 -69.8 -3.1 3.7 -5.3 2.9 13 13 A Q T 4 S+ 0 0 162 3,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.604 135.5 28.9-126.4 -37.3 4.6 -2.2 4.8 14 14 A H T 4 S- 0 0 61 2,-0.1 3,-0.1 0, 0.0 -3,-0.1 0.644 85.8-146.1-100.0 -21.1 1.7 0.3 4.1 15 15 A H < + 0 0 130 -4,-1.8 2,-0.3 1,-0.2 -5,-0.0 0.879 49.3 142.8 55.5 40.1 -0.9 -2.4 3.6 16 16 A E - 0 0 90 1,-0.1 -5,-1.8 0, 0.0 -1,-0.2 -0.872 66.0 -80.0-114.3 146.5 -2.6 -0.1 1.0 17 17 A A B -A 10 0A 45 -2,-0.3 2,-0.8 -7,-0.2 14,-0.4 -0.161 48.9-134.4 -43.8 112.3 -4.3 -1.2 -2.3 18 18 A L + 0 0 39 -9,-1.1 -9,-0.4 1,-0.2 12,-0.2 -0.649 52.2 138.8 -78.6 110.4 -1.4 -1.8 -4.7 19 19 A S + 0 0 59 -2,-0.8 28,-3.0 10,-0.4 -1,-0.2 0.525 54.7 68.0-124.1 -20.0 -2.2 -0.1 -8.0 20 20 A L E -BC 29 46B 45 9,-0.9 9,-1.8 26,-0.2 2,-0.3 -0.508 60.0-160.2 -99.4 170.2 1.2 1.4 -8.9 21 21 A F E -BC 28 45B 46 24,-1.6 24,-3.1 7,-0.3 7,-0.3 -0.910 15.7-129.5-156.1 123.7 4.5 -0.3 -9.9 22 22 A C E - C 0 44B 0 5,-1.7 5,-0.5 -2,-0.3 22,-0.2 -0.400 9.9-156.9 -72.3 148.1 8.0 1.0 -9.9 23 23 A Y S S+ 0 0 147 20,-2.0 -1,-0.1 3,-0.2 21,-0.1 0.929 87.6 43.5 -88.8 -60.1 10.1 0.7 -13.0 24 24 A E S S+ 0 0 149 1,-0.3 20,-0.0 19,-0.2 -2,-0.0 0.963 121.6 39.4 -49.7 -64.3 13.7 0.8 -11.7 25 25 A D S S- 0 0 67 2,-0.1 -1,-0.3 1,-0.1 -2,-0.1 0.778 101.5-142.2 -58.4 -26.5 13.1 -1.5 -8.7 26 26 A Q + 0 0 112 1,-0.2 2,-0.3 -5,-0.0 -3,-0.2 0.909 60.4 108.0 63.3 43.4 10.9 -3.5 -11.0 27 27 A E S S- 0 0 126 -5,-0.5 -5,-1.7 0, 0.0 -1,-0.2 -0.885 73.3 -89.1-142.2 172.2 8.4 -4.2 -8.2 28 28 A A E +B 21 0B 50 -2,-0.3 -7,-0.3 -7,-0.3 2,-0.2 -0.597 43.6 176.3 -87.0 147.0 4.9 -3.2 -7.1 29 29 A V E -B 20 0B 4 -9,-1.8 -9,-0.9 -2,-0.2 -10,-0.4 -0.788 19.3-124.0-138.2-179.1 4.2 -0.2 -4.8 30 30 A C > - 0 0 0 -2,-0.2 4,-2.3 -12,-0.2 5,-0.2 -0.688 40.6 -87.7-123.6 177.4 1.4 1.7 -3.2 31 31 A L H > S+ 0 0 97 -14,-0.4 4,-1.1 -2,-0.2 -13,-0.1 0.906 126.6 47.5 -51.3 -46.5 0.2 5.3 -3.1 32 32 A I H >4 S+ 0 0 61 2,-0.2 3,-1.8 1,-0.2 -1,-0.2 0.991 107.9 51.6 -59.2 -66.2 2.5 6.0 -0.2 33 33 A C H >4 S+ 0 0 13 1,-0.3 3,-3.0 2,-0.2 6,-0.6 0.873 102.2 62.7 -36.9 -54.0 5.7 4.5 -1.6 34 34 A A H 3< S+ 0 0 23 -4,-2.3 -1,-0.3 1,-0.3 8,-0.3 0.871 113.4 34.7 -40.9 -47.9 5.2 6.5 -4.8 35 35 A I T << S+ 0 0 141 -3,-1.8 -1,-0.3 -4,-1.1 2,-0.3 -0.204 104.4 106.1-103.2 40.8 5.6 9.7 -2.7 36 36 A S S < S- 0 0 24 -3,-3.0 5,-0.0 3,-0.1 -3,-0.0 -0.774 83.0-110.7-117.7 162.8 8.1 8.1 -0.3 37 37 A H S > S+ 0 0 163 -2,-0.3 3,-0.9 1,-0.2 4,-0.3 0.862 115.6 59.1 -58.0 -37.1 11.9 8.5 0.2 38 38 A T T 3 S+ 0 0 70 1,-0.3 -1,-0.2 2,-0.1 3,-0.2 0.979 126.7 13.0 -56.3 -62.7 12.4 5.0 -1.1 39 39 A H T > S+ 0 0 19 -6,-0.6 3,-0.7 1,-0.2 -1,-0.3 -0.263 92.5 122.7-110.6 44.2 10.8 5.6 -4.5 40 40 A R T < S+ 0 0 187 -3,-0.9 -1,-0.2 1,-0.2 -3,-0.1 0.983 85.5 25.8 -67.7 -59.7 10.7 9.4 -4.4 41 41 A A T 3 S+ 0 0 83 -4,-0.3 2,-0.3 -3,-0.2 -1,-0.2 -0.208 103.1 117.0 -98.7 41.7 12.7 10.1 -7.5 42 42 A H S < S- 0 0 67 -3,-0.7 2,-1.3 -8,-0.3 -3,-0.1 -0.745 74.5-107.5-109.2 157.7 11.7 6.8 -9.2 43 43 A T - 0 0 87 -2,-0.3 -20,-2.0 2,-0.0 2,-0.4 -0.683 43.1-175.8 -86.6 92.8 9.8 6.0 -12.3 44 44 A V E -C 22 0B 39 -2,-1.3 -22,-0.3 -22,-0.2 -24,-0.0 -0.729 3.7-166.6 -92.8 137.4 6.5 4.7 -11.1 45 45 A V E -C 21 0B 50 -24,-3.1 -24,-1.6 -2,-0.4 2,-0.1 -0.952 23.6-109.0-126.1 144.4 3.8 3.5 -13.5 46 46 A P E -C 20 0B 91 0, 0.0 -26,-0.2 0, 0.0 -27,-0.0 -0.396 13.5-146.2 -69.8 143.0 0.1 2.6 -13.1 47 47 A L + 0 0 94 -28,-3.0 2,-0.3 -2,-0.1 -27,-0.1 -0.053 66.0 106.4 -99.1 31.1 -1.0 -1.0 -13.2 48 48 A S - 0 0 96 -29,-0.1 -29,-0.0 4,-0.0 0, 0.0 -0.747 53.2-152.6-109.8 157.8 -4.3 -0.1 -14.8 49 49 A G > - 0 0 41 -2,-0.3 4,-0.9 1,-0.0 3,-0.1 -0.956 25.8-127.6-132.7 150.8 -5.5 -0.6 -18.3 50 50 A P T 4 S+ 0 0 131 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.529 101.5 73.8 -69.7 -5.0 -8.1 1.1 -20.6 51 51 A S T 4 S+ 0 0 119 1,-0.0 -3,-0.0 0, 0.0 0, 0.0 0.994 100.4 33.3 -71.7 -68.3 -9.6 -2.4 -21.2 52 52 A S T 4 0 0 128 -3,-0.1 -1,-0.0 1,-0.0 -4,-0.0 0.978 360.0 360.0 -51.9 -70.2 -11.4 -3.0 -17.9 53 53 A G < 0 0 91 -4,-0.9 -1,-0.0 0, 0.0 0, 0.0 -0.555 360.0 360.0-123.9 360.0 -12.4 0.6 -17.2