==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 30-MAR-06 2DIU . COMPND 2 MOLECULE: KIAA0430 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7282.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 59.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 14.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 131 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.1 21.5 17.0 14.2 2 2 A S + 0 0 114 1,-0.1 2,-0.4 3,-0.0 0, 0.0 0.665 360.0 91.5-122.5 -56.5 20.6 13.4 13.4 3 3 A S S S+ 0 0 130 2,-0.0 -1,-0.1 0, 0.0 2,-0.1 -0.257 88.7 33.8 -50.1 102.8 17.5 12.4 15.2 4 4 A G S S- 0 0 73 -2,-0.4 2,-0.3 -3,-0.1 0, 0.0 0.004 70.5-136.1 119.1 135.1 14.8 13.3 12.7 5 5 A S - 0 0 121 -2,-0.1 2,-0.3 2,-0.0 -3,-0.0 -0.750 4.8-153.1-118.1 166.1 14.5 13.4 8.9 6 6 A S + 0 0 125 -2,-0.3 2,-0.4 0, 0.0 3,-0.1 -0.898 24.2 154.5-145.0 111.1 13.1 15.8 6.4 7 7 A G - 0 0 54 -2,-0.3 -2,-0.0 2,-0.2 0, 0.0 -0.995 44.1-135.5-142.1 134.4 11.8 14.9 3.0 8 8 A C S S+ 0 0 130 -2,-0.4 48,-0.2 2,-0.1 -1,-0.1 0.883 83.8 92.8 -50.0 -43.1 9.3 16.5 0.6 9 9 A H S S- 0 0 83 1,-0.1 2,-0.4 46,-0.1 45,-0.2 0.132 74.6-133.1 -45.2 169.0 7.8 13.0 0.0 10 10 A T E -A 53 0A 23 43,-3.1 43,-2.4 45,-0.2 2,-0.3 -0.901 16.5-164.0-137.9 107.3 4.8 11.9 2.2 11 11 A L E -A 52 0A 54 -2,-0.4 2,-0.3 41,-0.2 41,-0.2 -0.647 9.4-147.7 -90.8 146.5 4.7 8.5 3.9 12 12 A L E -A 51 0A 0 39,-1.1 39,-1.6 -2,-0.3 2,-0.5 -0.801 2.7-143.0-113.1 155.4 1.6 7.0 5.3 13 13 A Y E -AB 50 79A 61 66,-2.5 66,-3.0 -2,-0.3 2,-0.3 -0.953 15.1-165.7-122.9 114.3 1.0 4.7 8.2 14 14 A V E +AB 49 78A 0 35,-3.0 35,-1.7 -2,-0.5 2,-0.3 -0.730 11.1 175.0 -98.8 147.1 -1.6 1.9 8.1 15 15 A Y E + B 0 77A 39 62,-2.5 62,-2.2 -2,-0.3 33,-0.2 -0.844 49.5 50.4-140.4 176.1 -2.9 -0.0 11.0 16 16 A N S S+ 0 0 83 -2,-0.3 -1,-0.2 60,-0.2 32,-0.1 0.942 71.9 170.7 56.6 51.3 -5.5 -2.6 12.0 17 17 A L - 0 0 9 30,-1.6 2,-1.8 -3,-0.1 -1,-0.2 -0.659 46.0-100.3 -95.1 150.2 -4.5 -5.0 9.2 18 18 A P > + 0 0 10 0, 0.0 3,-0.5 0, 0.0 8,-0.1 -0.473 40.3 179.4 -69.8 84.3 -5.7 -8.6 8.7 19 19 A A T 3 S+ 0 0 66 -2,-1.8 4,-0.2 1,-0.2 7,-0.1 0.901 78.6 60.2 -52.6 -45.2 -2.7 -10.4 10.2 20 20 A N T 3 S+ 0 0 150 -3,-0.2 2,-0.7 2,-0.1 -1,-0.2 0.897 88.3 82.5 -50.4 -45.3 -4.5 -13.7 9.5 21 21 A K S < S- 0 0 88 -3,-0.5 5,-0.3 1,-0.1 -1,-0.1 -0.512 102.3-105.5 -67.4 108.7 -4.6 -12.9 5.8 22 22 A D >> - 0 0 99 -2,-0.7 3,-2.6 1,-0.1 4,-1.7 0.002 24.8-127.4 -35.2 126.7 -1.2 -13.9 4.5 23 23 A G H 3> S+ 0 0 42 1,-0.3 4,-2.1 2,-0.2 5,-0.3 0.897 107.5 68.3 -47.0 -48.6 0.7 -10.7 3.8 24 24 A K H 3> S+ 0 0 156 1,-0.3 4,-0.6 2,-0.2 -1,-0.3 0.763 109.4 39.3 -43.9 -26.9 1.5 -11.7 0.3 25 25 A S H <> S+ 0 0 49 -3,-2.6 4,-1.6 2,-0.1 -1,-0.3 0.845 113.0 53.5 -91.9 -41.8 -2.3 -11.3 -0.2 26 26 A V H X S+ 0 0 5 -4,-1.7 4,-1.8 -5,-0.3 5,-0.2 0.976 104.1 55.0 -57.0 -60.8 -2.7 -8.1 1.9 27 27 A S H >X S+ 0 0 29 -4,-2.1 4,-2.8 1,-0.2 3,-1.7 0.904 105.7 51.0 -36.8 -71.4 -0.1 -6.1 0.2 28 28 A N H 3X S+ 0 0 98 -4,-0.6 4,-2.1 1,-0.3 5,-0.3 0.870 106.5 55.1 -34.0 -60.7 -1.5 -6.5 -3.3 29 29 A R H 3X S+ 0 0 89 -4,-1.6 4,-1.1 1,-0.2 -1,-0.3 0.865 115.9 39.4 -43.5 -43.8 -4.9 -5.4 -2.1 30 30 A L H S+ 0 0 0 -4,-2.2 5,-3.1 -3,-0.2 -2,-0.2 0.755 104.3 63.5 -92.6 -30.0 -2.2 3.0 -3.4 35 35 A D H ><5S+ 0 0 124 -4,-2.7 3,-0.7 -5,-0.4 -2,-0.2 0.855 107.8 43.5 -62.4 -35.9 -1.6 2.9 -7.2 36 36 A N T 3<5S+ 0 0 136 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.783 110.6 55.5 -79.8 -28.9 -4.7 5.0 -7.7 37 37 A C T 3 5S- 0 0 11 -4,-0.5 25,-0.2 -5,-0.2 -1,-0.2 -0.004 118.6-109.1 -92.7 28.8 -3.7 7.4 -4.9 38 38 A G T < 5S+ 0 0 42 -3,-0.7 16,-0.8 1,-0.2 2,-0.2 0.898 80.9 119.5 44.4 51.3 -0.3 8.0 -6.5 39 39 A G < - 0 0 19 -5,-3.1 2,-0.3 -8,-0.2 14,-0.2 -0.763 53.1-140.2-134.6-179.4 1.4 6.1 -3.8 40 40 A K - 0 0 117 12,-0.5 12,-2.4 -2,-0.2 2,-1.4 -0.965 19.1-128.0-150.4 129.5 3.6 3.0 -3.2 41 41 A V E -C 51 0A 15 -2,-0.3 10,-0.3 10,-0.2 3,-0.1 -0.610 25.2-177.0 -79.2 91.8 3.6 0.4 -0.4 42 42 A L E - 0 0 70 -2,-1.4 2,-0.3 8,-0.8 -1,-0.2 0.944 64.0 -29.9 -52.8 -54.0 7.2 0.4 0.7 43 43 A S E -C 50 0A 76 7,-1.5 7,-2.6 -3,-0.1 2,-0.4 -0.974 50.7-132.0-159.9 167.8 6.7 -2.4 3.2 44 44 A I - 0 0 51 -2,-0.3 2,-0.4 5,-0.2 5,-0.2 -0.895 22.7-176.1-135.2 105.0 4.1 -4.1 5.4 45 45 A T > - 0 0 82 -2,-0.4 3,-2.8 3,-0.2 -2,-0.0 -0.800 54.3 -46.0-102.4 141.6 5.0 -4.9 9.0 46 46 A G T 3 S- 0 0 69 -2,-0.4 -31,-0.0 1,-0.3 0, 0.0 -0.004 120.2 -23.9 38.4-135.9 2.7 -6.8 11.4 47 47 A C T 3 S+ 0 0 63 2,-0.0 -30,-1.6 -31,-0.0 -1,-0.3 0.241 130.4 75.9 -87.2 13.3 -0.8 -5.4 11.3 48 48 A S < - 0 0 34 -3,-2.8 2,-0.3 -33,-0.2 -33,-0.3 -0.709 60.5-163.2-119.4 171.3 0.6 -2.1 10.0 49 49 A A E -A 14 0A 1 -35,-1.7 -35,-3.0 -5,-0.2 2,-0.4 -0.991 10.6-143.2-153.6 155.7 2.0 -0.8 6.7 50 50 A I E -AC 13 43A 65 -7,-2.6 -7,-1.5 -2,-0.3 -8,-0.8 -0.983 18.3-175.3-128.4 124.9 4.1 2.1 5.3 51 51 A L E -AC 12 41A 0 -39,-1.6 -39,-1.1 -2,-0.4 2,-0.4 -0.676 17.6-136.1-112.6 168.3 3.5 3.8 2.0 52 52 A R E -A 11 0A 89 -12,-2.4 -12,-0.5 -41,-0.2 2,-0.3 -0.959 22.4-179.8-131.1 115.1 5.3 6.5 0.0 53 53 A F E -A 10 0A 1 -43,-2.4 -43,-3.1 -2,-0.4 -14,-0.2 -0.778 32.6-129.6-112.2 157.0 3.5 9.4 -1.7 54 54 A I S S- 0 0 108 -16,-0.8 2,-0.3 -2,-0.3 -1,-0.1 0.944 88.1 -2.9 -67.8 -49.8 4.9 12.3 -3.7 55 55 A N S > S- 0 0 72 -46,-0.1 4,-2.0 -45,-0.1 5,-0.2 -0.883 78.3 -96.6-138.9 169.7 3.0 15.0 -1.8 56 56 A Q H > S+ 0 0 112 -2,-0.3 4,-2.4 1,-0.2 3,-0.4 0.952 118.1 58.2 -50.9 -58.2 0.5 15.3 1.1 57 57 A D H >> S+ 0 0 98 1,-0.3 4,-1.9 2,-0.2 3,-0.9 0.896 108.3 45.1 -37.0 -63.3 -2.5 15.6 -1.3 58 58 A S H 3> S+ 0 0 26 1,-0.3 4,-0.9 2,-0.2 -1,-0.3 0.883 113.1 51.7 -51.4 -42.3 -1.7 12.2 -2.9 59 59 A A H 3X S+ 0 0 0 -4,-2.0 4,-1.9 -3,-0.4 -1,-0.3 0.803 108.3 54.1 -65.7 -29.4 -1.2 10.8 0.6 60 60 A E H XX>S+ 0 0 84 -4,-2.4 4,-3.1 -3,-0.9 3,-0.5 0.993 98.3 56.8 -68.1 -64.2 -4.5 12.2 1.7 61 61 A R H 3X5S+ 0 0 161 -4,-1.9 4,-0.7 1,-0.3 -1,-0.2 0.783 116.3 42.0 -37.7 -32.9 -6.7 10.6 -1.0 62 62 A A H 3X>S+ 0 0 0 -4,-0.9 4,-2.4 -5,-0.3 5,-0.6 0.849 111.7 52.1 -84.9 -38.7 -5.3 7.4 0.3 63 63 A Q H X