==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 30-MAR-06 2DIX . COMPND 2 MOLECULE: INTERFERON-INDUCIBLE DOUBLE STRANDED RNA- . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6182.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 71.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 16.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 28.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 147.3 -33.4 13.0 6.5 2 2 A S - 0 0 121 2,-0.0 2,-0.5 0, 0.0 0, 0.0 -0.820 360.0-151.6 -98.3 103.7 -32.7 10.9 3.4 3 3 A S + 0 0 127 -2,-0.8 0, 0.0 1,-0.1 0, 0.0 -0.608 66.6 68.4 -77.0 123.1 -32.1 7.3 4.3 4 4 A G - 0 0 56 -2,-0.5 -1,-0.1 2,-0.0 -2,-0.0 0.573 65.4-155.3 132.5 58.5 -29.8 5.5 1.8 5 5 A S - 0 0 125 1,-0.0 2,-0.3 2,-0.0 -2,-0.0 -0.173 18.2-178.5 -56.6 149.9 -26.2 6.7 1.9 6 6 A S - 0 0 118 2,-0.0 2,-0.3 0, 0.0 -1,-0.0 -0.978 13.8-168.4-149.8 159.5 -24.2 6.2 -1.2 7 7 A G - 0 0 75 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.959 15.8-136.1-156.3 134.7 -20.7 6.8 -2.5 8 8 A K - 0 0 174 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.667 33.2-106.1 -91.4 145.0 -18.9 6.7 -5.9 9 9 A T > - 0 0 65 -2,-0.3 4,-2.4 1,-0.1 3,-0.4 -0.249 22.2-121.1 -66.1 154.5 -15.6 5.1 -6.4 10 10 A P H > S+ 0 0 15 0, 0.0 4,-0.9 0, 0.0 5,-0.3 0.673 113.7 54.4 -69.8 -17.5 -12.4 7.2 -6.9 11 11 A I H > S+ 0 0 39 3,-0.1 4,-0.7 2,-0.1 5,-0.3 0.741 111.7 42.5 -87.3 -26.4 -11.9 5.6 -10.3 12 12 A Q H > S+ 0 0 89 -3,-0.4 4,-1.9 3,-0.2 5,-0.3 0.888 117.0 44.9 -85.4 -45.2 -15.4 6.4 -11.6 13 13 A V H X S+ 0 0 58 -4,-2.4 4,-2.9 3,-0.2 5,-0.2 0.986 114.9 45.9 -62.4 -61.5 -15.6 10.0 -10.3 14 14 A L H X S+ 0 0 1 -4,-0.9 4,-2.9 -5,-0.2 5,-0.2 0.949 121.4 37.1 -45.5 -66.2 -12.1 11.1 -11.4 15 15 A H H X S+ 0 0 66 -4,-0.7 4,-1.3 -5,-0.3 3,-0.2 0.975 116.7 49.9 -51.4 -68.9 -12.3 9.6 -14.9 16 16 A E H X S+ 0 0 97 -4,-1.9 4,-0.5 -5,-0.3 3,-0.3 0.820 114.5 49.5 -40.1 -37.6 -16.0 10.4 -15.5 17 17 A Y H >X S+ 0 0 64 -4,-2.9 3,-2.3 -5,-0.3 4,-1.2 0.947 97.1 65.1 -70.0 -50.3 -15.1 13.9 -14.4 18 18 A G H 3<>S+ 0 0 0 -4,-2.9 5,-3.3 1,-0.3 -1,-0.2 0.784 93.8 65.1 -42.8 -31.5 -12.1 14.3 -16.6 19 19 A M H ><5S+ 0 0 83 -4,-1.3 3,-1.3 -3,-0.3 -1,-0.3 0.889 98.4 51.6 -61.0 -40.6 -14.6 14.1 -19.5 20 20 A K H <<5S+ 0 0 156 -3,-2.3 -1,-0.2 -4,-0.5 -2,-0.2 0.884 111.1 47.3 -64.0 -39.4 -16.2 17.4 -18.4 21 21 A T T 3<5S- 0 0 46 -4,-1.2 -1,-0.3 2,-0.3 -2,-0.2 -0.070 112.8-117.7 -93.4 33.4 -12.8 19.1 -18.3 22 22 A K T < 5S+ 0 0 174 -3,-1.3 2,-0.4 -5,-0.2 -3,-0.2 0.767 87.6 108.6 35.3 31.8 -11.9 17.7 -21.7 23 23 A N < - 0 0 75 -5,-3.3 -2,-0.3 -6,-0.2 -1,-0.1 -0.919 55.8-159.4-141.1 112.1 -9.1 16.0 -19.8 24 24 A I - 0 0 78 -2,-0.4 2,-0.6 -5,-0.1 24,-0.2 -0.731 28.4-111.8 -93.6 137.3 -9.0 12.3 -19.0 25 25 A P - 0 0 5 0, 0.0 22,-0.2 0, 0.0 2,-0.2 -0.533 33.5-143.7 -69.8 112.6 -6.9 10.9 -16.2 26 26 A V E -A 46 0A 76 20,-1.1 20,-0.7 -2,-0.6 2,-0.4 -0.487 9.3-157.9 -78.3 147.3 -4.0 8.9 -17.6 27 27 A Y E +A 45 0A 54 -2,-0.2 2,-0.4 18,-0.2 18,-0.2 -0.907 19.4 164.0-131.9 105.4 -2.8 5.8 -15.9 28 28 A E E -A 44 0A 147 16,-1.0 16,-2.5 -2,-0.4 2,-0.7 -0.941 35.8-123.4-123.2 143.8 0.8 4.6 -16.6 29 29 A C E +A 43 0A 68 -2,-0.4 14,-0.2 14,-0.2 3,-0.1 -0.757 27.4 175.5 -88.6 115.9 2.9 2.1 -14.6 30 30 A E E S+ 0 0 105 12,-3.0 2,-0.4 -2,-0.7 -1,-0.2 0.948 70.8 18.2 -82.1 -56.7 6.2 3.6 -13.6 31 31 A R E - 0 0 177 11,-0.2 11,-1.8 2,-0.0 2,-0.5 -0.973 62.6-175.2-123.2 131.0 7.7 0.7 -11.5 32 32 A S E +A 41 0A 59 -2,-0.4 2,-0.5 9,-0.2 9,-0.2 -0.904 6.5 176.6-128.9 104.0 6.6 -2.9 -11.6 33 33 A D E -A 40 0A 79 7,-1.6 7,-1.9 -2,-0.5 2,-0.6 -0.926 8.4-168.6-111.2 124.1 8.1 -5.3 -9.1 34 34 A V + 0 0 106 -2,-0.5 3,-0.1 5,-0.2 -2,-0.0 -0.909 37.8 124.4-115.4 106.3 7.0 -8.9 -9.0 35 35 A Q S S+ 0 0 171 -2,-0.6 2,-0.2 1,-0.2 -1,-0.1 0.560 72.5 25.4-128.2 -29.4 8.2 -10.9 -6.0 36 36 A I S S- 0 0 102 -3,-0.2 -1,-0.2 2,-0.1 0, 0.0 -0.652 98.3 -78.3-127.8-175.6 5.1 -12.2 -4.4 37 37 A H S S+ 0 0 174 1,-0.2 -1,-0.0 -2,-0.2 -3,-0.0 0.904 124.9 44.0 -51.8 -46.0 1.5 -13.1 -5.3 38 38 A V S S- 0 0 46 20,-0.0 -1,-0.2 19,-0.0 -2,-0.1 -0.853 82.7-167.9-108.5 100.2 0.6 -9.4 -5.2 39 39 A P - 0 0 22 0, 0.0 2,-0.5 0, 0.0 19,-0.3 0.132 24.3-102.0 -69.7-169.6 3.2 -7.3 -7.0 40 40 A T E -A 33 0A 41 -7,-1.9 -7,-1.6 17,-0.1 2,-0.5 -0.972 32.3-178.2-127.1 119.8 3.6 -3.5 -6.9 41 41 A F E -A 32 0A 41 16,-2.3 2,-0.9 -2,-0.5 16,-0.3 -0.958 16.6-149.5-121.2 117.2 2.5 -1.3 -9.8 42 42 A T E - 0 0 14 -11,-1.8 -12,-3.0 -2,-0.5 2,-0.6 -0.736 15.4-164.4 -87.8 104.0 3.0 2.5 -9.6 43 43 A F E -AB 29 54A 17 11,-1.3 11,-2.2 -2,-0.9 2,-0.6 -0.791 6.5-149.9 -93.0 121.8 0.2 4.2 -11.5 44 44 A R E -AB 28 53A 114 -16,-2.5 -16,-1.0 -2,-0.6 2,-0.6 -0.805 7.0-157.3 -94.7 122.7 0.8 7.8 -12.4 45 45 A V E -AB 27 52A 0 7,-2.6 7,-2.6 -2,-0.6 2,-0.6 -0.880 10.1-176.4-103.7 119.4 -2.3 10.0 -12.6 46 46 A T E +AB 26 51A 53 -20,-0.7 -20,-1.1 -2,-0.6 2,-0.6 -0.924 7.0 170.2-119.3 108.0 -2.0 13.2 -14.7 47 47 A V E > - B 0 50A 7 3,-2.9 3,-2.4 -2,-0.6 2,-1.7 -0.922 65.6 -58.9-121.2 107.1 -5.1 15.5 -14.8 48 48 A G T 3 S- 0 0 48 -2,-0.6 -24,-0.0 1,-0.3 3,-0.0 -0.408 124.0 -17.8 63.8 -87.6 -4.6 18.9 -16.4 49 49 A D T 3 S+ 0 0 146 -2,-1.7 2,-0.4 0, 0.0 -1,-0.3 0.504 117.7 94.8-124.0 -17.5 -1.9 20.2 -14.1 50 50 A I E < -B 47 0A 13 -3,-2.4 -3,-2.9 2,-0.0 2,-0.4 -0.650 50.2-176.8 -83.1 131.7 -2.2 17.8 -11.2 51 51 A T E +B 46 0A 63 -2,-0.4 2,-0.2 -5,-0.2 -5,-0.2 -0.963 9.4 160.8-134.4 117.4 0.1 14.8 -11.2 52 52 A C E -B 45 0A 23 -7,-2.6 -7,-2.6 -2,-0.4 2,-0.3 -0.756 21.6-146.5-127.2 173.8 0.0 12.0 -8.6 53 53 A T E -B 44 0A 69 -9,-0.3 2,-0.7 -2,-0.2 -9,-0.2 -0.996 5.1-151.1-146.7 138.6 1.2 8.4 -8.2 54 54 A G E +B 43 0A 3 -11,-2.2 -11,-1.3 -2,-0.3 2,-0.3 -0.812 26.4 168.9-114.2 92.6 -0.1 5.4 -6.4 55 55 A E + 0 0 113 -2,-0.7 -13,-0.1 -13,-0.2 3,-0.1 -0.796 43.9 66.5-104.0 144.6 2.6 3.0 -5.4 56 56 A G S S+ 0 0 31 1,-0.4 2,-0.2 -2,-0.3 -1,-0.1 -0.158 96.5 27.7 144.9 -45.5 2.3 0.1 -3.0 57 57 A T S S- 0 0 31 -16,-0.3 -16,-2.3 -3,-0.2 -1,-0.4 -0.743 81.8 -88.3-134.6-177.7 0.0 -2.5 -4.7 58 58 A S >>> - 0 0 5 -19,-0.3 4,-1.1 -18,-0.3 3,-0.7 -0.198 68.9 -63.6 -86.1-178.6 -1.0 -3.7 -8.2 59 59 A K T 345S+ 0 0 132 1,-0.2 5,-0.5 3,-0.2 4,-0.4 0.760 129.7 73.4 -35.3 -30.3 -3.9 -2.4 -10.4 60 60 A K T 3>5S- 0 0 166 3,-0.1 4,-0.6 2,-0.1 -1,-0.2 0.974 125.3 -7.8 -50.3 -72.0 -6.0 -3.6 -7.5 61 61 A L H <>5S+ 0 0 62 -3,-0.7 4,-2.4 2,-0.2 5,-0.3 0.885 127.6 69.2 -93.9 -52.8 -5.2 -0.9 -5.0 62 62 A A H X5S+ 0 0 0 -4,-1.1 4,-2.6 1,-0.3 -3,-0.2 0.832 105.0 46.9 -32.3 -50.0 -2.4 1.0 -6.7 63 63 A K H >X S+ 0 0 0 -4,-1.2 4,-2.8 2,-0.2 3,-1.1 0.909 111.5 50.7 -38.8 -64.5 -6.2 13.4 -8.0 71 71 A I H >X S+ 0 0 24 -4,-1.8 4,-1.7 1,-0.3 3,-0.5 0.922 105.3 53.7 -39.7 -71.0 -9.8 13.7 -6.8 72 72 A N H 3X S+ 0 0 102 -4,-2.1 4,-1.7 1,-0.3 -1,-0.3 0.807 115.7 43.6 -35.3 -39.4 -9.0 14.8 -3.3 73 73 A I H S+ 0 0 46 -4,-1.8 4,-1.9 -3,-1.1 5,-1.2 0.892 103.6 62.1 -76.5 -42.1 -6.9 17.5 -5.0 74 74 A L H <<5S+ 0 0 27 -4,-2.8 -2,-0.2 -3,-0.5 -1,-0.2 0.738 109.7 45.8 -55.9 -22.1 -9.6 18.3 -7.6 75 75 A K H <5S+ 0 0 150 -4,-1.7 -2,-0.2 -5,-0.3 -1,-0.2 0.938 124.8 26.3 -85.5 -57.7 -11.7 19.3 -4.6 76 76 A A H <5S+ 0 0 91 -4,-1.7 -3,-0.2 -5,-0.2 -2,-0.2 0.976 128.7 42.4 -70.4 -57.9 -9.3 21.4 -2.5 77 77 A N T <5S- 0 0 98 -4,-1.9 -3,-0.2 -5,-0.2 -1,-0.2 0.862 86.5-162.7 -57.3 -37.2 -7.0 22.6 -5.4 78 78 A A < - 0 0 60 -5,-1.2 -4,-0.2 1,-0.2 -3,-0.1 0.901 19.3-138.2 52.4 45.2 -10.1 23.2 -7.5 79 79 A S + 0 0 49 -6,-0.2 -1,-0.2 1,-0.1 -2,-0.0 -0.008 51.4 132.7 -35.4 122.3 -8.0 23.3 -10.6 80 80 A G - 0 0 59 -3,-0.2 2,-0.2 2,-0.0 -1,-0.1 -0.252 39.1-155.5 178.4 83.7 -9.3 26.2 -12.7 81 81 A P - 0 0 120 0, 0.0 2,-0.1 0, 0.0 -2,-0.0 -0.468 16.6-153.0 -69.7 132.1 -7.0 28.8 -14.3 82 82 A S - 0 0 121 -2,-0.2 2,-0.1 1,-0.1 -2,-0.0 -0.401 17.5 -99.5 -98.4 177.4 -8.7 32.2 -15.0 83 83 A S 0 0 114 1,-0.1 -1,-0.1 -2,-0.1 0, 0.0 -0.444 360.0 360.0 -93.6 169.4 -8.0 34.8 -17.6 84 84 A G 0 0 130 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.941 360.0 360.0 -69.2 360.0 -6.1 38.1 -17.2