==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 31-MAR-06 2DJA . COMPND 2 MOLECULE: MIDLINE-2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.MIYAMOTO,T.KIGAWA,T.TOMIZAWA,S.KOSHIBA,M.INOUE,S.YOKOYAMA, . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8795.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 32.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 127 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-158.5 -42.9 17.1 -8.4 2 2 A S - 0 0 134 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.988 360.0-139.3-160.5 156.4 -42.7 13.3 -8.6 3 3 A S + 0 0 130 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.976 24.3 165.4-126.2 135.9 -42.2 10.2 -6.3 4 4 A G - 0 0 78 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.998 9.4-174.4-150.6 145.6 -40.1 7.2 -7.1 5 5 A S + 0 0 128 -2,-0.3 2,-0.3 71,-0.0 -2,-0.0 -0.890 9.1 159.3-135.5 165.4 -38.7 4.2 -5.2 6 6 A S - 0 0 93 -2,-0.3 70,-0.0 1,-0.0 -2,-0.0 -0.976 20.1-147.7-173.7 168.8 -36.4 1.2 -5.8 7 7 A G - 0 0 58 -2,-0.3 2,-0.3 70,-0.1 69,-0.1 0.219 31.0 -96.0-117.2-122.0 -34.1 -1.4 -4.2 8 8 A V - 0 0 134 69,-0.0 69,-0.0 -2,-0.0 -2,-0.0 -0.939 17.3-128.6-170.0 147.2 -31.0 -3.1 -5.4 9 9 A E - 0 0 170 -2,-0.3 2,-0.2 1,-0.0 0, 0.0 -0.803 32.9-106.4-105.5 144.8 -29.8 -6.3 -7.1 10 10 A P - 0 0 119 0, 0.0 3,-0.1 0, 0.0 -1,-0.0 -0.467 44.7 -98.1 -69.7 132.3 -27.0 -8.7 -5.8 11 11 A V - 0 0 126 -2,-0.2 2,-0.2 1,-0.1 3,-0.0 -0.149 45.1-103.5 -50.3 138.8 -23.8 -8.5 -7.7 12 12 A P - 0 0 105 0, 0.0 2,-0.7 0, 0.0 -1,-0.1 -0.463 38.8 -99.9 -69.7 133.0 -23.4 -11.3 -10.3 13 13 A D - 0 0 132 -2,-0.2 2,-0.1 -3,-0.1 -2,-0.0 -0.347 43.8-136.8 -55.9 100.7 -21.1 -14.2 -9.3 14 14 A T - 0 0 116 -2,-0.7 -1,-0.1 1,-0.1 4,-0.1 -0.355 16.2-130.3 -63.5 137.9 -18.0 -13.2 -11.2 15 15 A H - 0 0 143 1,-0.1 3,-0.2 2,-0.1 -1,-0.1 -0.203 20.8-107.6 -81.4 176.8 -16.2 -16.1 -13.0 16 16 A L S S+ 0 0 171 1,-0.2 3,-0.1 3,-0.0 -1,-0.1 -0.023 94.7 97.5 -95.5 29.7 -12.6 -17.0 -12.8 17 17 A R S S+ 0 0 236 1,-0.2 -1,-0.2 2,-0.0 2,-0.1 -0.221 82.5 40.8-109.8 41.2 -12.0 -15.8 -16.4 18 18 A G - 0 0 22 -3,-0.2 2,-0.4 -4,-0.1 -1,-0.2 -0.480 70.0-140.0 172.8 111.5 -10.6 -12.4 -15.5 19 19 A I - 0 0 130 -2,-0.1 2,-0.2 -3,-0.1 10,-0.1 -0.673 27.4-174.2 -83.4 127.2 -8.3 -11.1 -12.8 20 20 A T - 0 0 49 -2,-0.4 2,-0.2 8,-0.2 8,-0.2 -0.460 31.1 -78.0-109.8-176.5 -9.3 -7.8 -11.2 21 21 A C - 0 0 6 6,-1.6 -1,-0.1 3,-1.4 6,-0.1 -0.585 32.6-127.8 -85.9 146.8 -7.7 -5.5 -8.7 22 22 A L S S+ 0 0 143 -2,-0.2 3,-0.1 1,-0.2 -1,-0.1 0.982 110.5 31.8 -54.0 -67.3 -7.7 -6.2 -5.0 23 23 A D S S+ 0 0 101 1,-0.2 2,-0.7 2,-0.1 -1,-0.2 0.890 128.7 44.7 -59.3 -41.0 -9.2 -2.9 -3.8 24 24 A H - 0 0 38 3,-0.1 -3,-1.4 1,-0.1 -1,-0.2 -0.901 63.0-173.8-111.7 106.7 -11.2 -2.6 -7.1 25 25 A E S S+ 0 0 144 -2,-0.7 -1,-0.1 -5,-0.2 -3,-0.1 0.049 85.8 51.4 -84.7 27.1 -12.9 -5.8 -8.1 26 26 A N S S+ 0 0 97 1,-0.2 2,-0.4 -5,-0.1 -1,-0.2 0.611 90.1 75.6-127.4 -42.8 -13.9 -4.1 -11.4 27 27 A E S S- 0 0 56 -6,-0.1 -6,-1.6 1,-0.1 2,-0.9 -0.638 78.1-130.3 -81.0 128.8 -10.8 -2.6 -12.9 28 28 A K - 0 0 105 -2,-0.4 -8,-0.2 -8,-0.2 14,-0.1 -0.688 32.9-109.3 -82.5 104.8 -8.4 -5.2 -14.5 29 29 A V + 0 0 36 -2,-0.9 12,-0.3 -5,-0.2 -1,-0.1 -0.018 49.0 165.4 -34.6 111.0 -5.0 -4.5 -13.1 30 30 A N + 0 0 46 10,-0.3 28,-1.0 28,-0.0 29,-0.5 0.247 56.6 52.8-117.0 8.3 -3.1 -3.1 -16.1 31 31 A M E -A 40 0A 29 9,-2.2 9,-1.7 26,-0.2 2,-0.4 -0.865 64.7-144.0-137.7 171.0 -0.1 -1.7 -14.2 32 32 A Y E -A 39 0A 65 7,-0.3 24,-2.2 -2,-0.3 2,-0.3 -0.963 14.5-135.9-144.8 123.7 2.5 -2.8 -11.7 33 33 A C E > -AB 38 55A 0 5,-2.2 5,-0.8 -2,-0.4 22,-0.2 -0.587 10.6-166.4 -79.8 136.1 4.1 -0.9 -8.8 34 34 A V T 5S+ 0 0 58 20,-2.0 -1,-0.1 -2,-0.3 3,-0.1 0.936 87.1 43.8 -85.1 -56.1 7.8 -1.1 -8.4 35 35 A S T 5S+ 0 0 103 19,-0.5 -1,-0.1 1,-0.3 20,-0.1 0.914 126.4 34.7 -55.9 -46.0 8.3 0.3 -4.9 36 36 A D T 5S- 0 0 77 2,-0.1 -1,-0.3 18,-0.1 -2,-0.2 0.567 98.7-145.3 -85.2 -10.3 5.4 -1.7 -3.6 37 37 A D T 5 + 0 0 103 1,-0.2 2,-0.3 -3,-0.1 -3,-0.2 0.908 57.5 119.4 43.8 53.6 6.2 -4.5 -5.9 38 38 A Q E - 0 0 0 -2,-0.3 4,-1.1 -12,-0.3 5,-0.2 -0.412 37.3 -92.4-107.2-175.3 -4.9 -0.9 -11.7 42 42 A A H >> S+ 0 0 11 1,-0.2 4,-2.9 2,-0.2 3,-0.7 0.933 125.2 52.3 -64.5 -47.7 -5.6 2.6 -13.1 43 43 A L H 3>>S+ 0 0 52 1,-0.3 5,-2.6 2,-0.2 4,-1.6 0.781 105.5 58.2 -59.8 -26.7 -7.8 3.6 -10.2 44 44 A C H 345S+ 0 0 3 3,-0.2 6,-1.4 1,-0.2 -1,-0.3 0.842 114.6 34.8 -72.2 -34.3 -4.9 2.6 -7.9 45 45 A K H <<5S+ 0 0 60 -4,-1.1 -2,-0.2 -3,-0.7 -1,-0.2 0.741 117.0 55.9 -90.1 -27.5 -2.5 5.0 -9.6 46 46 A L H <5S- 0 0 98 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.2 0.995 141.5 -19.8 -67.6 -65.6 -5.1 7.7 -10.3 47 47 A V T <5S+ 0 0 105 -4,-1.6 4,-0.3 -5,-0.1 -3,-0.2 0.569 109.9 110.7-118.3 -21.7 -6.4 8.2 -6.7 48 48 A G S > + 0 0 14 -6,-1.4 3,-0.9 1,-0.2 -1,-0.3 -0.228 56.9 132.6 -93.8 44.1 -0.2 5.0 -5.5 51 51 A R T < S+ 0 0 173 -3,-0.5 -1,-0.2 -2,-0.4 -2,-0.1 0.952 86.5 15.9 -58.5 -53.0 -0.9 8.7 -6.3 52 52 A D T 3 S+ 0 0 157 -3,-0.4 -1,-0.3 2,-0.1 2,-0.2 -0.383 100.8 128.7-119.4 52.7 2.7 9.6 -6.8 53 53 A H < - 0 0 65 -3,-0.9 2,-0.8 -8,-0.2 -3,-0.1 -0.519 63.9-107.3-102.2 172.0 4.3 6.1 -7.1 54 54 A Q + 0 0 135 -2,-0.2 -20,-2.0 2,-0.0 -19,-0.5 -0.827 45.5 170.8-104.9 97.1 6.6 4.6 -9.7 55 55 A V B -B 33 0A 32 -2,-0.8 2,-0.8 -22,-0.2 -22,-0.2 -0.758 31.1-135.0-106.2 152.8 4.7 2.1 -11.9 56 56 A A - 0 0 48 -24,-2.2 -24,-0.1 -2,-0.3 -2,-0.0 -0.818 26.6-132.9-109.8 92.8 5.8 0.4 -15.1 57 57 A S - 0 0 72 -2,-0.8 -26,-0.2 -26,-0.1 3,-0.1 0.037 14.8-160.9 -39.5 147.2 3.0 0.6 -17.6 58 58 A L + 0 0 87 -28,-1.0 2,-0.6 1,-0.1 -1,-0.1 0.868 69.0 73.8 -99.2 -61.7 2.3 -2.8 -19.3 59 59 A N - 0 0 67 -29,-0.5 4,-0.2 1,-0.2 -1,-0.1 -0.415 66.5-159.3 -60.5 106.6 0.4 -2.0 -22.5 60 60 A D S S+ 0 0 154 -2,-0.6 2,-0.8 1,-0.1 -1,-0.2 0.963 79.3 60.9 -51.2 -61.8 3.1 -0.6 -24.8 61 61 A R S S- 0 0 212 1,-0.1 -1,-0.1 -3,-0.1 -2,-0.0 -0.598 100.8-116.9 -74.4 108.1 0.7 1.2 -27.1 62 62 A F + 0 0 145 -2,-0.8 3,-0.2 1,-0.1 -1,-0.1 -0.193 36.8 178.6 -47.1 121.2 -1.2 3.7 -25.0 63 63 A E + 0 0 150 1,-0.2 2,-1.5 -4,-0.2 -1,-0.1 0.910 68.4 53.4 -92.0 -59.2 -4.9 2.6 -25.0 64 64 A K + 0 0 153 1,-0.2 -1,-0.2 3,-0.0 -2,-0.0 -0.617 65.6 149.6 -82.4 87.0 -6.6 5.2 -22.7 65 65 A L + 0 0 119 -2,-1.5 -1,-0.2 -3,-0.2 -2,-0.1 0.965 54.1 50.5 -80.5 -75.3 -5.5 8.4 -24.3 66 66 A K - 0 0 193 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.217 69.3-163.1 -63.3 155.6 -8.3 11.0 -23.7 67 67 A Q + 0 0 154 2,-0.0 2,-0.2 -3,-0.0 -1,-0.0 -0.962 15.5 158.7-148.2 126.2 -9.6 11.4 -20.2 68 68 A T - 0 0 135 -2,-0.3 2,-0.4 0, 0.0 0, 0.0 -0.798 41.5 -90.5-136.5 178.0 -12.9 13.0 -19.0 69 69 A L - 0 0 174 -2,-0.2 2,-0.3 3,-0.0 -2,-0.0 -0.814 34.3-140.6 -98.4 131.9 -15.3 13.0 -16.0 70 70 A E - 0 0 184 -2,-0.4 2,-0.1 1,-0.1 0, 0.0 -0.718 29.5-100.4 -92.7 139.1 -18.2 10.6 -15.9 71 71 A M - 0 0 158 -2,-0.3 2,-0.1 1,-0.1 -1,-0.1 -0.351 40.7-129.5 -58.3 125.3 -21.6 11.7 -14.6 72 72 A N - 0 0 121 -2,-0.1 2,-0.4 1,-0.0 -1,-0.1 -0.462 15.8-133.3 -78.2 149.7 -22.0 10.5 -11.1 73 73 A L - 0 0 134 -2,-0.1 2,-0.5 2,-0.0 -1,-0.0 -0.846 10.2-154.8-107.1 141.1 -25.2 8.6 -10.0 74 74 A T + 0 0 115 -2,-0.4 2,-0.2 2,-0.0 -2,-0.0 -0.944 25.0 157.9-119.3 113.7 -27.2 9.3 -6.9 75 75 A N - 0 0 116 -2,-0.5 2,-0.2 2,-0.0 -2,-0.0 -0.695 27.8-128.1-124.4 177.4 -29.3 6.5 -5.4 76 76 A L - 0 0 150 -2,-0.2 2,-0.2 -69,-0.1 -71,-0.0 -0.728 17.8-178.5-122.7 172.7 -30.8 5.7 -2.0 77 77 A V + 0 0 129 -2,-0.2 2,-0.2 2,-0.0 -70,-0.1 -0.827 10.4 155.3-174.2 132.3 -30.9 2.7 0.3 78 78 A K - 0 0 189 -2,-0.2 2,-0.0 0, 0.0 -2,-0.0 -0.810 35.4-124.5-166.4 120.6 -32.4 1.7 3.7 79 79 A S + 0 0 113 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.344 35.4 179.6 -66.5 145.2 -33.3 -1.6 5.2 80 80 A G - 0 0 54 1,-0.3 -1,-0.1 -2,-0.0 0, 0.0 -0.445 32.2 -45.3-127.8-158.5 -36.9 -2.1 6.3 81 81 A P + 0 0 137 0, 0.0 -1,-0.3 0, 0.0 2,-0.3 -0.114 52.7 173.3 -69.8 171.1 -39.2 -4.7 7.9 82 82 A S - 0 0 125 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.976 13.6-159.7-171.3 165.1 -39.4 -8.4 7.0 83 83 A S 0 0 123 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.844 360.0 360.0-144.9 179.9 -40.9 -11.8 7.8 84 84 A G 0 0 120 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.562 360.0 360.0-149.1 360.0 -40.4 -15.5 7.4