==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 06-APR-06 2DK3 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE HECTD1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6092.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 47.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 20.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 135 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-177.7 -18.0 -23.0 -4.7 2 2 A S + 0 0 132 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.956 360.0 157.7-125.9 143.1 -20.4 -20.8 -2.8 3 3 A S + 0 0 130 -2,-0.4 2,-0.2 3,-0.0 3,-0.1 -0.954 3.9 157.9-153.6 169.4 -20.8 -17.0 -2.9 4 4 A G + 0 0 62 -2,-0.3 2,-0.3 1,-0.1 -2,-0.0 -0.660 54.0 3.4-161.5-142.0 -23.2 -14.2 -2.2 5 5 A S - 0 0 129 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.455 65.5-142.7 -66.2 125.9 -23.5 -10.5 -1.3 6 6 A S + 0 0 121 -2,-0.3 -1,-0.1 -3,-0.1 -3,-0.0 -0.677 44.8 121.8 -92.5 144.5 -20.1 -8.9 -1.3 7 7 A G + 0 0 75 -2,-0.3 2,-0.3 2,-0.1 -2,-0.0 -0.042 21.9 138.9 159.6 90.0 -19.1 -6.2 1.2 8 8 A V - 0 0 90 1,-0.0 3,-0.3 0, 0.0 -2,-0.0 -0.998 41.7-119.0-147.7 145.6 -16.3 -6.3 3.7 9 9 A R S S+ 0 0 212 -2,-0.3 -2,-0.1 1,-0.2 -1,-0.0 0.032 92.1 47.6 -70.4-175.5 -13.6 -3.9 5.1 10 10 A S S S+ 0 0 54 1,-0.1 -1,-0.2 3,-0.0 4,-0.2 0.805 77.4 126.6 49.0 31.2 -9.9 -4.4 4.7 11 11 A Q > + 0 0 94 -3,-0.3 3,-2.7 2,-0.2 4,-0.4 0.931 62.1 54.3 -81.5 -51.5 -10.6 -5.2 1.1 12 12 A V G >> S+ 0 0 27 1,-0.3 3,-2.6 2,-0.2 4,-1.2 0.840 96.1 69.7 -51.5 -35.5 -8.2 -2.7 -0.6 13 13 A L G 34 S+ 0 0 44 1,-0.3 -1,-0.3 2,-0.2 34,-0.2 0.757 87.9 66.0 -55.5 -24.2 -5.4 -4.3 1.5 14 14 A K G <4 S+ 0 0 142 -3,-2.7 -1,-0.3 1,-0.2 -2,-0.2 0.717 109.1 36.6 -70.7 -20.8 -5.9 -7.3 -0.7 15 15 A Y T <4 S+ 0 0 54 -3,-2.6 2,-2.5 -4,-0.4 -2,-0.2 0.523 84.3 113.1-106.2 -11.8 -4.6 -5.2 -3.6 16 16 A M < + 0 0 5 -4,-1.2 31,-1.2 50,-0.1 -3,-0.1 -0.378 48.3 141.9 -64.4 78.8 -2.1 -3.2 -1.6 17 17 A V > - 0 0 60 -2,-2.5 3,-1.8 29,-0.2 2,-0.9 -0.889 62.4 -94.6-124.4 154.9 0.9 -4.8 -3.4 18 18 A P T 3 S+ 0 0 58 0, 0.0 26,-0.3 0, 0.0 28,-0.1 -0.530 113.6 28.8 -69.8 101.2 4.3 -3.4 -4.6 19 19 A G T 3 S+ 0 0 58 24,-1.4 25,-0.1 -2,-0.9 -3,-0.1 0.261 95.0 108.5 132.1 -8.8 3.8 -2.5 -8.2 20 20 A A S < S- 0 0 4 -3,-1.8 23,-0.9 -5,-0.1 2,-0.4 -0.155 71.0 -97.0 -86.5-175.2 0.1 -1.6 -8.3 21 21 A R E +A 42 0A 132 21,-0.2 56,-1.3 56,-0.1 2,-0.3 -0.888 44.0 163.7-110.6 137.8 -1.6 1.8 -8.6 22 22 A V E -AB 41 76A 0 19,-0.8 19,-2.4 -2,-0.4 2,-0.3 -0.989 13.5-165.5-149.6 154.8 -2.9 3.9 -5.7 23 23 A I E - B 0 75A 21 52,-2.6 52,-1.9 -2,-0.3 17,-0.1 -0.844 43.9 -58.2-135.6 172.0 -4.0 7.4 -4.9 24 24 A R E - B 0 74A 118 15,-0.4 50,-0.2 -2,-0.3 2,-0.1 -0.166 56.9-143.6 -51.1 140.0 -4.6 9.7 -2.0 25 25 A G > - 0 0 9 48,-2.6 3,-1.0 1,-0.1 48,-0.1 -0.333 27.2 -96.7 -99.7-176.1 -7.3 8.4 0.4 26 26 A L T 3 S+ 0 0 172 46,-0.3 47,-0.1 1,-0.3 -2,-0.1 0.774 121.9 60.1 -71.6 -26.4 -10.1 10.0 2.4 27 27 A D T 3 S+ 0 0 66 45,-1.2 2,-1.3 38,-0.1 -1,-0.3 -0.021 71.5 139.1 -90.9 30.3 -7.8 9.9 5.5 28 28 A W < + 0 0 44 -3,-1.0 45,-0.0 1,-0.2 -4,-0.0 -0.627 9.8 154.0 -79.9 93.6 -5.3 12.1 3.7 29 29 A K + 0 0 136 -2,-1.3 -1,-0.2 2,-0.0 2,-0.2 0.445 49.0 89.2 -98.0 -3.3 -4.2 14.5 6.4 30 30 A W S S- 0 0 108 1,-0.2 3,-0.0 -3,-0.1 -2,-0.0 -0.522 81.0-106.1 -92.8 162.0 -0.8 15.1 4.8 31 31 A R - 0 0 186 -2,-0.2 2,-2.0 1,-0.1 3,-0.2 -0.011 59.2 -61.0 -74.3-175.3 0.1 17.8 2.2 32 32 A D > + 0 0 78 1,-0.2 3,-0.8 2,-0.1 -1,-0.1 -0.499 62.6 163.8 -72.4 83.6 0.7 17.2 -1.5 33 33 A Q T 3 S+ 0 0 86 -2,-2.0 2,-0.4 1,-0.3 -1,-0.2 0.870 73.1 55.7 -69.5 -37.8 3.7 14.8 -1.1 34 34 A D T 3 S- 0 0 17 1,-0.3 24,-0.3 -3,-0.2 -1,-0.3 -0.140 118.4-109.6 -87.7 39.4 3.4 13.7 -4.7 35 35 A G < - 0 0 31 -3,-0.8 -1,-0.3 -2,-0.4 4,-0.3 0.127 56.4 -28.4 57.8 179.0 3.6 17.2 -6.0 36 36 A S S S+ 0 0 86 2,-0.1 2,-0.2 -3,-0.1 3,-0.0 -0.926 106.5 36.1-133.2 157.3 0.7 19.1 -7.5 37 37 A P S S- 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.574 108.5 -85.1 -69.7 165.2 -1.8 19.1 -8.9 38 38 A Q - 0 0 124 -2,-0.2 2,-0.3 1,-0.1 -2,-0.1 0.063 60.8-177.5 -34.5 139.5 -2.8 15.8 -7.2 39 39 A G - 0 0 22 -4,-0.3 -15,-0.4 -3,-0.0 2,-0.2 -0.884 26.8 -93.3-141.2 172.2 -1.4 12.8 -9.1 40 40 A E - 0 0 112 -2,-0.3 17,-0.8 -17,-0.1 -17,-0.2 -0.563 37.2-159.7 -88.2 152.5 -1.4 9.0 -9.1 41 41 A G E -A 22 0A 0 -19,-2.4 -19,-0.8 -2,-0.2 2,-0.3 -0.482 12.7-126.9-118.5-170.0 1.2 6.9 -7.4 42 42 A T E -A 21 0A 45 -21,-0.2 13,-2.1 -2,-0.2 -21,-0.2 -0.866 22.2-126.6-148.5 109.6 2.7 3.4 -7.5 43 43 A V B +C 54 0B 1 -23,-0.9 -24,-1.4 -2,-0.3 11,-0.3 -0.197 28.0 172.9 -53.6 140.5 3.0 1.1 -4.5 44 44 A T + 0 0 74 9,-1.7 2,-0.3 -26,-0.3 10,-0.2 0.494 59.8 52.3-125.5 -16.6 6.5 -0.3 -4.0 45 45 A G S S- 0 0 14 8,-1.9 2,-0.3 -28,-0.2 -1,-0.1 -0.885 81.3-110.6-125.4 157.0 6.1 -2.1 -0.7 46 46 A E - 0 0 136 -2,-0.3 2,-0.6 -29,-0.1 -29,-0.2 -0.671 42.5-100.2 -87.2 136.9 3.7 -4.7 0.7 47 47 A L - 0 0 43 -31,-1.2 2,-0.5 -2,-0.3 5,-0.3 -0.369 49.8-177.4 -57.4 103.8 1.3 -3.7 3.4 48 48 A H - 0 0 98 3,-3.1 3,-0.4 -2,-0.6 20,-0.1 -0.930 65.3 -14.9-112.4 127.1 3.0 -4.9 6.6 49 49 A N S S- 0 0 159 -2,-0.5 -1,-0.2 1,-0.3 18,-0.1 0.797 134.4 -48.5 54.6 29.1 1.4 -4.6 10.0 50 50 A G S S+ 0 0 13 1,-0.2 16,-1.8 -3,-0.1 18,-1.4 0.820 120.3 108.1 81.5 32.5 -1.0 -2.1 8.4 51 51 A W E + D 0 65B 76 -3,-0.4 -3,-3.1 14,-0.2 2,-0.4 -0.926 40.0 177.1-146.7 117.4 1.7 -0.1 6.7 52 52 A I E - D 0 64B 0 12,-1.3 12,-2.1 -2,-0.3 2,-0.2 -0.948 19.4-137.5-123.2 142.3 2.5 -0.0 3.0 53 53 A D E - D 0 63B 50 -2,-0.4 -8,-1.9 10,-0.2 -9,-1.7 -0.647 17.8-172.8 -96.2 153.6 5.0 2.1 1.1 54 54 A V E -CD 43 62B 0 8,-1.2 8,-1.1 -11,-0.3 2,-1.0 -0.969 19.4-145.4-150.1 130.4 4.5 3.8 -2.3 55 55 A T E - D 0 61B 66 -13,-2.1 6,-0.3 -2,-0.3 -13,-0.0 -0.778 25.0-153.3 -98.8 94.0 6.8 5.7 -4.6 56 56 A W E > - D 0 60B 7 4,-1.8 4,-0.9 -2,-1.0 3,-0.3 -0.100 20.9-119.2 -59.8 162.7 4.8 8.5 -6.2 57 57 A D T 4 S+ 0 0 145 -17,-0.8 -1,-0.1 1,-0.2 -16,-0.1 0.923 106.7 70.8 -71.0 -45.9 5.8 9.9 -9.6 58 58 A A T 4 S- 0 0 59 -24,-0.3 -1,-0.2 1,-0.1 -24,-0.1 0.830 124.9 -89.0 -38.6 -41.1 6.5 13.4 -8.3 59 59 A G T 4 S+ 0 0 65 1,-0.3 2,-0.2 -3,-0.3 -2,-0.2 0.614 88.1 88.2 124.8 70.9 9.6 11.9 -6.7 60 60 A G E < -D 56 0B 37 -4,-0.9 -4,-1.8 -26,-0.1 2,-0.4 -0.717 43.4-158.3 172.5 134.7 9.1 10.6 -3.2 61 61 A S E +D 55 0B 55 -6,-0.3 2,-0.3 -2,-0.2 -6,-0.2 -0.947 21.6 150.0-126.2 146.0 8.2 7.4 -1.3 62 62 A N E -D 54 0B 95 -8,-1.1 -8,-1.2 -2,-0.4 2,-0.3 -0.982 44.3 -90.6-164.2 165.4 6.9 6.8 2.2 63 63 A S E -D 53 0B 36 -2,-0.3 2,-0.4 -10,-0.2 -10,-0.2 -0.676 36.8-164.1 -88.4 138.0 4.7 4.6 4.4 64 64 A Y E -D 52 0B 9 -12,-2.1 -12,-1.3 -2,-0.3 2,-0.3 -0.963 29.3-102.8-125.2 140.2 1.0 5.4 4.8 65 65 A R E +D 51 0B 57 -2,-0.4 8,-3.1 -14,-0.2 9,-0.4 -0.413 43.5 164.7 -61.5 119.2 -1.4 4.1 7.4 66 66 A M B S-E 72 0C 0 -16,-1.8 6,-0.2 -2,-0.3 -15,-0.2 -0.070 81.8 -32.2-127.4 31.5 -3.6 1.5 5.7 67 67 A G S > S+ 0 0 28 4,-0.8 3,-0.8 -17,-0.4 -16,-0.1 0.089 100.7 115.3 142.3 -24.7 -5.1 -0.2 8.8 68 68 A A T 3 S+ 0 0 43 -18,-1.4 -17,-0.1 1,-0.3 -18,-0.1 0.860 106.2 10.7 -38.9 -47.6 -2.4 0.1 11.5 69 69 A E T 3 S- 0 0 133 2,-0.2 -1,-0.3 -19,-0.2 3,-0.1 0.217 123.0 -90.1-117.7 10.3 -4.8 2.3 13.4 70 70 A G S < S+ 0 0 48 -3,-0.8 2,-0.4 1,-0.2 -2,-0.1 0.779 91.2 121.2 85.6 28.9 -7.9 1.7 11.3 71 71 A K - 0 0 99 -44,-0.0 2,-1.0 -45,-0.0 -4,-0.8 -0.971 50.8-152.8-130.6 118.5 -7.3 4.6 8.9 72 72 A F B +E 66 0C 66 -2,-0.4 -45,-1.2 -6,-0.2 -46,-0.3 -0.767 21.6 167.2 -92.5 100.4 -6.9 4.1 5.1 73 73 A D + 0 0 3 -8,-3.1 -48,-2.6 -2,-1.0 2,-0.3 0.728 67.0 51.8 -82.3 -23.9 -4.7 6.9 3.8 74 74 A L E +B 24 0A 2 -9,-0.4 2,-0.3 -50,-0.2 -50,-0.2 -0.831 65.3 177.1-114.9 153.4 -4.2 5.2 0.5 75 75 A K E -B 23 0A 89 -52,-1.9 -52,-2.6 -2,-0.3 -50,-0.0 -0.947 39.4 -72.4-148.0 166.5 -6.7 3.7 -2.0 76 76 A L E -B 22 0A 51 -2,-0.3 -54,-0.3 -54,-0.2 -64,-0.0 -0.298 59.7 -99.0 -61.9 143.6 -6.9 2.0 -5.4 77 77 A A > - 0 0 14 -56,-1.3 3,-1.9 1,-0.1 2,-1.8 -0.188 44.8 -89.9 -61.8 155.0 -6.3 4.3 -8.4 78 78 A P T 3 S+ 0 0 98 0, 0.0 -1,-0.1 0, 0.0 -56,-0.0 -0.468 119.1 10.2 -69.7 83.6 -9.3 5.7 -10.3 79 79 A G T 3 S+ 0 0 78 -2,-1.8 2,-0.3 1,-0.4 -2,-0.1 0.375 94.2 132.2 126.2 1.0 -9.7 2.9 -12.9 80 80 A Y < - 0 0 57 -3,-1.9 2,-0.4 -59,-0.1 -1,-0.4 -0.675 35.8-163.7 -87.4 136.3 -7.4 0.3 -11.5 81 81 A S - 0 0 102 -2,-0.3 3,-0.2 1,-0.1 -4,-0.0 -0.970 31.2 -92.3-123.7 134.3 -8.7 -3.3 -11.1 82 82 A G - 0 0 31 -2,-0.4 2,-0.4 1,-0.2 -1,-0.1 0.144 57.8 -82.4 -36.0 154.7 -7.1 -6.1 -9.1 83 83 A P - 0 0 86 0, 0.0 -1,-0.2 0, 0.0 -63,-0.0 -0.519 50.4-111.5 -69.7 120.2 -4.6 -8.3 -10.9 84 84 A S - 0 0 122 -2,-0.4 -3,-0.0 -3,-0.2 -2,-0.0 -0.190 33.4-175.8 -51.9 137.9 -6.4 -11.0 -12.9 85 85 A S 0 0 131 -3,-0.1 -1,-0.1 1,-0.0 -3,-0.0 0.845 360.0 360.0-102.2 -59.1 -5.9 -14.5 -11.4 86 86 A G 0 0 121 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.362 360.0 360.0 131.4 360.0 -7.5 -17.0 -13.8