==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION, TRANSFERASE 06-APR-06 2DK5 . COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE III 39 KDA . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7393.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 25 27.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 103.7 39.7 30.6 -30.7 2 2 A S - 0 0 129 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.786 360.0-178.7-126.1 169.7 36.3 30.1 -29.0 3 3 A S + 0 0 127 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.941 31.3 77.3-156.9 175.3 35.0 28.4 -25.9 4 4 A G - 0 0 69 -2,-0.3 2,-0.5 1,-0.1 -2,-0.0 0.248 59.5-112.6 91.3 143.3 31.8 27.7 -23.9 5 5 A S - 0 0 121 3,-0.0 2,-0.7 0, 0.0 3,-0.1 -0.954 19.5-167.7-117.2 124.6 29.2 25.0 -24.4 6 6 A S + 0 0 139 -2,-0.5 -2,-0.0 1,-0.2 0, 0.0 -0.765 69.6 33.5-112.0 85.5 25.6 25.8 -25.4 7 7 A G + 0 0 75 -2,-0.7 2,-0.4 1,-0.0 -1,-0.2 0.337 62.3 165.2 132.9 92.8 23.5 22.7 -25.0 8 8 A D - 0 0 121 -3,-0.1 2,-0.6 2,-0.0 -1,-0.0 -0.982 24.3-148.5-133.7 144.6 24.0 20.0 -22.3 9 9 A S + 0 0 107 -2,-0.4 2,-0.4 2,-0.0 0, 0.0 -0.902 29.1 155.4-116.7 104.1 21.8 17.2 -21.0 10 10 A Q + 0 0 133 -2,-0.6 2,-0.4 0, 0.0 -2,-0.0 -0.855 13.7 138.9-132.2 98.0 22.3 16.4 -17.3 11 11 A N - 0 0 154 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.983 27.9-175.1-143.7 128.6 19.4 14.7 -15.5 12 12 A A - 0 0 115 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.877 47.7-115.1 -86.7 -44.1 19.3 11.9 -13.0 13 13 A G - 0 0 72 2,-0.0 2,-0.2 1,-0.0 -2,-0.0 0.810 37.5-172.3 104.9 74.4 15.6 11.5 -12.7 14 14 A K - 0 0 188 1,-0.0 2,-0.4 0, 0.0 -1,-0.0 -0.507 21.2-118.3 -93.2 163.9 14.2 12.3 -9.3 15 15 A M - 0 0 89 -2,-0.2 8,-0.0 2,-0.1 -1,-0.0 -0.867 26.2-118.9-106.5 135.8 10.6 11.8 -8.0 16 16 A K + 0 0 195 -2,-0.4 -1,-0.1 2,-0.1 3,-0.1 -0.120 67.4 81.9 -63.6 165.4 8.4 14.6 -6.9 17 17 A G - 0 0 56 1,-0.1 -2,-0.1 3,-0.0 0, 0.0 0.328 65.4-129.8 105.1 125.8 7.0 14.8 -3.3 18 18 A S S S+ 0 0 127 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 0.395 86.4 88.5 -84.4 3.2 8.7 16.1 -0.1 19 19 A D - 0 0 122 -3,-0.1 4,-0.1 1,-0.1 3,-0.1 -0.782 61.9-157.7-104.4 147.3 7.7 12.8 1.6 20 20 A N S S+ 0 0 85 -2,-0.3 4,-0.4 1,-0.1 -1,-0.1 -0.139 74.0 87.8-112.8 35.7 9.7 9.6 1.7 21 21 A Q S > S+ 0 0 59 2,-0.2 4,-1.6 3,-0.1 5,-0.2 0.838 86.8 45.4 -97.9 -46.1 6.8 7.3 2.3 22 22 A E H > S+ 0 0 46 1,-0.2 4,-1.2 2,-0.2 -2,-0.1 0.667 114.6 52.9 -72.2 -16.2 5.6 6.5 -1.2 23 23 A K H > S+ 0 0 109 2,-0.2 4,-1.2 3,-0.1 -1,-0.2 0.807 106.5 50.1 -87.2 -34.0 9.3 6.0 -2.2 24 24 A L H > S+ 0 0 65 -4,-0.4 4,-1.0 2,-0.2 -2,-0.2 0.854 113.9 45.7 -72.5 -35.7 10.1 3.5 0.6 25 25 A V H >X S+ 0 0 0 -4,-1.6 4,-1.8 2,-0.2 3,-0.7 0.944 108.6 53.5 -72.1 -50.3 7.1 1.4 -0.2 26 26 A Y H 3X S+ 0 0 40 -4,-1.2 4,-2.0 1,-0.3 -1,-0.2 0.852 107.4 54.1 -53.1 -36.8 7.6 1.3 -4.0 27 27 A Q H 3X S+ 0 0 97 -4,-1.2 4,-1.2 1,-0.2 -1,-0.3 0.856 106.4 51.0 -67.0 -35.7 11.1 0.1 -3.3 28 28 A I H X S+ 0 0 0 -4,-1.8 4,-0.8 2,-0.2 3,-0.5 0.929 107.8 48.1 -71.6 -47.1 7.4 -3.8 -4.0 30 30 A E H 3< S+ 0 0 85 -4,-2.0 3,-0.4 1,-0.2 -1,-0.2 0.805 105.7 61.3 -63.5 -29.5 10.0 -4.0 -6.7 31 31 A D H 3< S+ 0 0 135 -4,-1.2 -1,-0.2 1,-0.2 -2,-0.2 0.864 92.7 64.4 -65.3 -36.8 12.2 -6.1 -4.4 32 32 A A H << S- 0 0 39 -4,-1.0 3,-0.4 -3,-0.5 -1,-0.2 0.869 94.6-161.1 -54.7 -39.0 9.5 -8.7 -4.3 33 33 A G >< - 0 0 22 -4,-0.8 3,-1.4 -3,-0.4 -1,-0.2 -0.398 48.2 -27.0 87.6-167.3 10.0 -9.4 -8.0 34 34 A N T 3 S+ 0 0 123 1,-0.3 -1,-0.2 -2,-0.1 3,-0.1 0.893 133.4 64.4 -49.0 -45.2 7.7 -11.1 -10.4 35 35 A K T 3 S- 0 0 195 -3,-0.4 -1,-0.3 1,-0.1 -2,-0.2 0.859 99.0-155.4 -47.7 -39.9 6.2 -13.1 -7.5 36 36 A G < - 0 0 14 -3,-1.4 2,-0.3 -7,-0.2 45,-0.2 -0.412 6.2 -91.2 92.6-171.2 5.0 -9.8 -6.1 37 37 A I E -A 80 0A 18 43,-0.7 43,-2.6 -2,-0.1 2,-0.4 -0.987 25.4-112.1-145.9 153.6 4.1 -8.8 -2.6 38 38 A W E > -A 79 0A 87 -2,-0.3 4,-1.4 41,-0.2 41,-0.2 -0.702 27.5-122.7 -89.3 135.9 1.1 -8.8 -0.2 39 39 A S H > S+ 0 0 8 39,-1.6 4,-1.3 -2,-0.4 3,-0.2 0.827 115.5 48.7 -41.7 -37.9 -0.4 -5.4 0.8 40 40 A R H >> S+ 0 0 106 2,-0.2 4,-1.1 1,-0.2 3,-0.6 0.985 99.0 60.9 -68.4 -60.5 0.3 -6.7 4.4 41 41 A D H 3> S+ 0 0 87 1,-0.3 4,-1.4 2,-0.2 -1,-0.2 0.747 106.7 54.0 -38.7 -26.5 3.9 -7.8 4.0 42 42 A V H 3X>S+ 0 0 0 -4,-1.4 4,-2.5 2,-0.2 5,-0.7 0.951 91.5 67.1 -76.0 -52.9 4.4 -4.2 3.1 43 43 A R H <<>S+ 0 0 110 -4,-1.3 5,-0.9 -3,-0.6 4,-0.2 0.828 108.9 42.1 -34.7 -45.0 2.9 -2.6 6.2 44 44 A Y H <5S+ 0 0 154 -4,-1.1 3,-0.3 3,-0.2 -1,-0.2 0.963 120.1 40.7 -70.3 -54.2 5.8 -4.1 8.1 45 45 A K H <5S+ 0 0 146 -4,-1.4 -2,-0.2 1,-0.2 -3,-0.2 0.981 119.9 42.7 -58.1 -61.9 8.5 -3.3 5.6 46 46 A S T <5S- 0 0 2 -4,-2.5 -1,-0.2 1,-0.1 -3,-0.2 0.618 101.3-141.1 -61.7 -10.5 7.3 0.2 4.7 47 47 A N T < + 0 0 140 -5,-0.7 -3,-0.2 -3,-0.3 -4,-0.1 0.825 58.5 129.1 51.4 33.3 6.7 0.5 8.5 48 48 A L < - 0 0 26 -5,-0.9 -1,-0.2 -6,-0.3 -2,-0.1 -0.847 63.3 -99.8-119.1 155.5 3.5 2.4 7.7 49 49 A P >> - 0 0 62 0, 0.0 4,-2.3 0, 0.0 3,-2.1 -0.289 36.8-106.5 -69.7 155.2 -0.1 2.0 8.8 50 50 A L H 3> S+ 0 0 63 1,-0.3 4,-2.9 2,-0.2 5,-0.3 0.910 122.2 58.4 -46.2 -51.1 -2.7 0.2 6.7 51 51 A T H 3> S+ 0 0 93 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.769 111.6 43.8 -51.9 -26.3 -4.3 3.5 5.9 52 52 A E H <> S+ 0 0 51 -3,-2.1 4,-2.7 2,-0.2 5,-0.2 0.860 111.2 50.7 -86.9 -41.4 -0.9 4.4 4.4 53 53 A I H X S+ 0 0 0 -4,-2.3 4,-2.5 2,-0.2 5,-0.2 0.824 110.7 51.9 -65.7 -31.9 -0.2 1.2 2.6 54 54 A N H X S+ 0 0 82 -4,-2.9 4,-1.7 -5,-0.3 5,-0.2 0.958 115.1 38.3 -69.4 -52.7 -3.6 1.4 1.0 55 55 A K H X S+ 0 0 105 -4,-1.1 4,-2.9 -5,-0.3 -2,-0.2 0.887 121.8 46.1 -65.7 -39.9 -3.3 4.9 -0.4 56 56 A I H X S+ 0 0 1 -4,-2.7 4,-2.3 2,-0.2 5,-0.3 0.970 109.9 51.0 -67.3 -55.6 0.4 4.3 -1.2 57 57 A L H X S+ 0 0 0 -4,-2.5 4,-1.1 -5,-0.2 -1,-0.2 0.867 118.5 41.1 -49.9 -40.1 -0.1 0.9 -2.9 58 58 A K H >X S+ 0 0 127 -4,-1.7 4,-0.9 -5,-0.2 3,-0.8 0.979 106.9 58.7 -73.0 -59.9 -2.8 2.5 -5.0 59 59 A N H >X S+ 0 0 72 -4,-2.9 3,-1.9 1,-0.3 4,-1.0 0.862 106.7 50.7 -35.0 -53.8 -1.1 5.9 -5.8 60 60 A L H ><>S+ 0 0 0 -4,-2.3 5,-1.7 1,-0.3 3,-1.4 0.917 100.8 61.1 -54.0 -47.3 1.8 4.0 -7.4 61 61 A E H <<5S+ 0 0 44 -4,-1.1 -1,-0.3 -3,-0.8 3,-0.3 0.678 104.6 52.6 -55.0 -15.8 -0.7 2.0 -9.5 62 62 A S H <<5S+ 0 0 101 -3,-1.9 -1,-0.3 -4,-0.9 -2,-0.2 0.737 101.2 57.0 -91.3 -27.4 -1.6 5.4 -10.9 63 63 A K T <<5S- 0 0 102 -3,-1.4 -2,-0.2 -4,-1.0 -1,-0.2 0.231 114.7-114.2 -87.5 14.0 1.9 6.4 -11.8 64 64 A K T 5S+ 0 0 149 -3,-0.3 -3,-0.2 -4,-0.2 19,-0.1 0.811 88.8 115.8 57.4 30.6 2.2 3.3 -13.9 65 65 A L S