==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 06-APR-06 2DK6 . COMPND 2 MOLECULE: PARP11 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7679.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 55.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 107.1 17.9 11.6 -21.6 2 2 A S - 0 0 132 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.920 360.0-178.6-123.1 148.2 18.0 8.1 -20.2 3 3 A S + 0 0 127 -2,-0.3 2,-0.2 2,-0.0 0, 0.0 -0.974 16.7 124.7-143.1 155.5 19.7 6.7 -17.2 4 4 A G - 0 0 81 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.686 29.7-145.4 159.1 147.1 20.1 3.3 -15.5 5 5 A S - 0 0 94 -2,-0.2 2,-0.3 0, 0.0 -2,-0.0 -0.894 11.2-175.1-130.3 160.1 22.7 0.7 -14.3 6 6 A S + 0 0 132 -2,-0.3 3,-0.1 1,-0.0 -2,-0.0 -0.986 41.1 88.7-155.8 144.0 22.8 -3.1 -14.0 7 7 A G + 0 0 72 1,-0.7 -1,-0.0 -2,-0.3 2,-0.0 -0.092 66.5 79.4 164.3 -52.0 25.2 -5.7 -12.6 8 8 A N - 0 0 106 2,-0.0 -1,-0.7 1,-0.0 2,-0.3 -0.222 57.1-156.9 -77.3 171.3 24.4 -6.5 -9.0 9 9 A E - 0 0 153 -3,-0.1 2,-0.6 89,-0.0 -3,-0.0 -0.970 10.8-156.7-154.8 135.8 21.7 -8.9 -7.8 10 10 A V + 0 0 73 -2,-0.3 88,-0.1 1,-0.1 -2,-0.0 -0.891 34.8 140.6-118.7 101.7 19.7 -9.3 -4.6 11 11 A D S S+ 0 0 124 -2,-0.6 -1,-0.1 1,-0.1 0, 0.0 0.619 72.1 59.0-109.5 -22.9 18.2 -12.7 -4.1 12 12 A D S S- 0 0 118 2,-0.1 3,-0.1 1,-0.0 -2,-0.1 0.559 82.9-156.7 -83.0 -9.1 18.8 -13.1 -0.4 13 13 A M > + 0 0 112 1,-0.2 3,-0.7 2,-0.1 2,-0.5 0.798 29.4 170.6 34.0 38.9 16.8 -10.0 0.3 14 14 A D T 3 - 0 0 109 1,-0.3 -1,-0.2 3,-0.0 -2,-0.1 -0.671 62.6 -8.6 -82.8 126.2 18.8 -9.8 3.5 15 15 A T T 3 S+ 0 0 129 -2,-0.5 2,-0.4 1,-0.2 -1,-0.3 0.946 94.6 139.0 53.3 54.5 18.3 -6.5 5.4 16 16 A S < - 0 0 55 -3,-0.7 2,-1.7 2,-0.1 -1,-0.2 -0.763 46.3-150.9-132.5 87.4 16.4 -4.9 2.6 17 17 A D - 0 0 139 -2,-0.4 2,-0.9 1,-0.1 -3,-0.0 -0.351 23.7-179.6 -59.1 86.5 13.4 -2.9 3.8 18 18 A T - 0 0 62 -2,-1.7 2,-0.5 -5,-0.1 -1,-0.1 -0.797 7.6-165.4 -97.2 99.5 11.2 -3.4 0.7 19 19 A Q - 0 0 128 -2,-0.9 76,-1.3 77,-0.1 2,-0.4 -0.724 11.7-140.3 -87.8 127.6 7.9 -1.5 1.2 20 20 A W E -A 94 0A 127 -2,-0.5 2,-0.3 74,-0.2 30,-0.1 -0.735 16.5-156.3 -90.0 130.5 5.2 -2.4 -1.2 21 21 A G E -A 93 0A 0 72,-1.9 72,-2.5 -2,-0.4 2,-0.4 -0.783 6.3-136.8-107.9 151.4 3.0 0.4 -2.5 22 22 A W E +A 92 0A 0 -2,-0.3 12,-1.8 70,-0.2 2,-0.3 -0.851 22.6 179.5-107.9 141.3 -0.6 0.3 -3.8 23 23 A F E -AB 91 33A 37 68,-2.2 68,-1.8 -2,-0.4 2,-0.4 -0.915 12.9-155.3-136.2 162.2 -1.8 2.2 -6.9 24 24 A Y E -AB 90 32A 51 8,-2.1 8,-2.7 -2,-0.3 66,-0.2 -0.989 23.7-116.7-143.9 131.0 -5.0 2.6 -8.9 25 25 A L - 0 0 48 64,-3.2 6,-0.2 -2,-0.4 2,-0.1 -0.324 32.1-148.4 -64.4 144.5 -5.6 3.6 -12.5 26 26 A A - 0 0 14 4,-0.1 63,-0.1 62,-0.1 -1,-0.1 -0.381 26.4-103.2-104.5-175.4 -7.5 6.9 -13.1 27 27 A E S S+ 0 0 137 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 0.828 119.5 53.6 -78.4 -33.9 -9.9 8.1 -15.8 28 28 A C S S- 0 0 118 2,-0.2 -1,-0.2 1,-0.0 -3,-0.0 0.813 124.5-100.4 -70.1 -30.8 -7.2 10.2 -17.5 29 29 A G S S+ 0 0 47 1,-0.2 2,-0.4 0, 0.0 -2,-0.1 0.703 82.6 119.0 113.8 34.5 -4.9 7.2 -17.7 30 30 A K - 0 0 140 -6,-0.1 2,-0.5 2,-0.0 -1,-0.2 -0.965 60.6-129.0-135.4 118.1 -2.5 7.7 -14.8 31 31 A W - 0 0 93 -2,-0.4 2,-0.4 -6,-0.2 -6,-0.3 -0.499 28.4-159.6 -66.9 115.5 -2.0 5.3 -11.9 32 32 A H E -B 24 0A 80 -8,-2.7 -8,-2.1 -2,-0.5 2,-0.1 -0.817 14.2-121.8-101.7 137.7 -2.3 7.3 -8.7 33 33 A M E -B 23 0A 48 -2,-0.4 2,-0.8 -10,-0.2 -10,-0.2 -0.370 34.1 -97.9 -73.9 154.1 -0.9 6.0 -5.4 34 34 A F - 0 0 15 -12,-1.8 12,-1.3 -2,-0.1 -12,-0.2 -0.632 47.5-173.7 -77.1 109.1 -3.2 5.6 -2.4 35 35 A Q - 0 0 93 -2,-0.8 2,-0.1 10,-0.2 -3,-0.0 -0.829 25.3-109.8-107.7 143.9 -2.8 8.7 -0.2 36 36 A P + 0 0 81 0, 0.0 2,-0.3 0, 0.0 8,-0.2 -0.381 38.4 176.1 -69.7 145.0 -4.3 9.2 3.2 37 37 A D B +C 43 0B 55 6,-1.3 6,-1.5 1,-0.1 4,-0.1 -0.974 22.2 173.3-154.1 136.4 -7.1 11.8 3.7 38 38 A T S S- 0 0 126 -2,-0.3 28,-0.2 4,-0.2 4,-0.1 0.801 87.9 -5.0-107.0 -52.5 -9.3 12.9 6.5 39 39 A N S > S+ 0 0 147 1,-0.2 3,-0.9 2,-0.1 2,-0.9 0.785 121.2 66.9-109.4 -55.9 -11.3 15.9 5.3 40 40 A S T 3 S- 0 0 71 1,-0.3 -1,-0.2 3,-0.0 -2,-0.1 -0.607 135.5 -27.2 -75.2 106.2 -10.0 16.7 1.8 41 41 A Q T 3 S- 0 0 137 -2,-0.9 -1,-0.3 1,-0.1 -2,-0.1 0.875 89.6-144.3 55.2 39.6 -11.0 13.7 -0.4 42 42 A C < + 0 0 33 -3,-0.9 2,-0.3 -4,-0.1 -4,-0.2 0.048 37.0 147.3 -34.4 136.1 -10.9 11.5 2.7 43 43 A S B -C 37 0B 51 -6,-1.5 -6,-1.3 -3,-0.1 2,-0.3 -0.948 47.2 -75.4-162.7 178.7 -9.6 8.0 1.8 44 44 A V - 0 0 22 -2,-0.3 2,-0.1 -8,-0.2 -6,-0.0 -0.637 45.3-116.9 -90.0 146.3 -7.7 5.0 3.0 45 45 A S >> - 0 0 44 -2,-0.3 4,-1.4 1,-0.1 3,-0.7 -0.475 29.0-107.1 -80.7 151.9 -3.9 5.0 3.2 46 46 A S H 3> S+ 0 0 27 -12,-1.3 4,-1.2 1,-0.3 5,-0.1 0.709 122.7 58.2 -49.2 -19.3 -1.7 2.7 1.1 47 47 A E H 3> S+ 0 0 147 2,-0.2 4,-3.3 3,-0.2 -1,-0.3 0.928 101.9 49.8 -77.8 -48.7 -1.3 0.9 4.5 48 48 A D H <> S+ 0 0 47 -3,-0.7 4,-1.6 2,-0.2 -2,-0.2 0.973 113.2 44.8 -53.6 -62.9 -4.9 0.2 5.2 49 49 A I H >X S+ 0 0 0 -4,-1.4 4,-1.9 1,-0.2 3,-0.9 0.934 117.0 45.8 -47.1 -57.4 -5.7 -1.3 1.8 50 50 A E H 3X S+ 0 0 18 -4,-1.2 4,-2.2 -5,-0.3 -1,-0.2 0.951 103.6 62.0 -52.1 -56.6 -2.5 -3.4 1.8 51 51 A K H 3X S+ 0 0 119 -4,-3.3 4,-1.1 1,-0.2 -1,-0.3 0.822 109.5 45.1 -38.9 -39.0 -3.1 -4.6 5.4 52 52 A S H XX S+ 0 0 23 -4,-1.6 4,-2.9 -3,-0.9 3,-0.5 0.991 104.7 55.7 -71.1 -64.8 -6.3 -6.2 4.1 53 53 A F H 3< S+ 0 0 40 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.785 103.7 63.5 -38.2 -32.9 -5.0 -7.8 0.9 54 54 A K H 3< S+ 0 0 143 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.988 112.2 28.9 -58.2 -65.1 -2.5 -9.5 3.2 55 55 A T H << S+ 0 0 124 -4,-1.1 -2,-0.2 -3,-0.5 -1,-0.2 0.877 138.0 30.7 -64.7 -38.6 -5.1 -11.5 5.3 56 56 A N >< + 0 0 41 -4,-2.9 3,-1.2 -5,-0.1 -1,-0.3 -0.728 63.8 164.6-125.6 82.2 -7.5 -11.7 2.3 57 57 A P T 3 S+ 0 0 68 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.650 86.0 39.2 -69.8 -15.3 -5.5 -11.7 -1.0 58 58 A C T 3 S+ 0 0 101 -3,-0.1 2,-0.1 16,-0.1 -5,-0.0 -0.211 109.0 70.4-128.0 41.6 -8.6 -12.9 -2.8 59 59 A G S < S- 0 0 22 -3,-1.2 16,-1.2 13,-0.1 15,-0.9 -0.229 74.2-103.9-128.5-142.3 -11.3 -10.8 -1.0 60 60 A S E -D 73 0C 49 13,-0.2 2,-0.7 14,-0.1 13,-0.2 -0.969 10.8-137.2-159.9 142.3 -12.5 -7.2 -0.8 61 61 A I E -D 72 0C 22 11,-1.7 11,-0.9 -2,-0.3 2,-0.5 -0.883 19.9-157.5-107.6 106.9 -12.3 -4.3 1.7 62 62 A S E +D 71 0C 101 -2,-0.7 2,-0.3 9,-0.2 9,-0.2 -0.706 26.2 153.2 -86.1 126.4 -15.6 -2.5 2.1 63 63 A F E -D 70 0C 35 7,-2.0 7,-2.5 -2,-0.5 2,-0.4 -0.984 33.4-139.5-150.0 157.3 -15.3 1.1 3.3 64 64 A T E +D 69 0C 106 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.980 34.6 141.8-126.0 125.5 -17.1 4.4 3.2 65 65 A T E > +D 68 0C 18 3,-2.5 3,-1.6 -2,-0.4 -22,-0.1 -0.952 50.0 35.9-152.4 169.2 -15.4 7.8 2.8 66 66 A S T 3 S- 0 0 39 -2,-0.3 -1,-0.2 1,-0.3 3,-0.1 0.923 126.5 -63.7 47.5 52.9 -15.8 11.2 1.2 67 67 A K T 3 S+ 0 0 178 1,-0.1 2,-0.3 -3,-0.1 -1,-0.3 0.822 124.1 89.4 41.9 37.1 -19.6 11.1 1.6 68 68 A F E < S-D 65 0C 90 -3,-1.6 -3,-2.5 2,-0.0 2,-0.3 -0.987 76.6-116.9-159.0 150.7 -19.5 8.1 -0.7 69 69 A S E -D 64 0C 57 -2,-0.3 13,-1.1 -5,-0.2 14,-1.0 -0.701 30.3-176.3 -93.5 143.0 -19.1 4.3 -0.5 70 70 A Y E -DE 63 81C 50 -7,-2.5 -7,-2.0 -2,-0.3 2,-0.4 -0.992 8.9-163.7-140.1 146.2 -16.2 2.5 -2.2 71 71 A K E -DE 62 80C 49 9,-2.1 9,-2.4 -2,-0.3 2,-0.5 -0.990 4.0-161.4-132.9 139.3 -15.2 -1.1 -2.6 72 72 A I E -DE 61 79C 0 -11,-0.9 -11,-1.7 -2,-0.4 2,-1.0 -0.925 3.3-165.1-124.4 107.5 -11.8 -2.7 -3.6 73 73 A D E >> -DE 60 78C 19 5,-1.3 5,-1.8 -2,-0.5 4,-0.7 -0.777 6.1-177.6 -94.2 99.6 -11.9 -6.3 -4.9 74 74 A F T >45S+ 0 0 3 -2,-1.0 3,-1.3 -15,-0.9 -1,-0.2 0.920 83.0 58.2 -60.4 -45.8 -8.3 -7.6 -4.7 75 75 A A T 345S+ 0 0 62 -16,-1.2 -1,-0.2 1,-0.3 -15,-0.1 0.870 109.8 44.2 -52.1 -40.2 -9.3 -10.9 -6.3 76 76 A E T 345S- 0 0 108 -17,-0.3 -1,-0.3 2,-0.2 -2,-0.2 0.599 107.8-131.7 -81.0 -11.9 -10.6 -9.0 -9.3 77 77 A M T <<5S+ 0 0 79 -3,-1.3 13,-1.5 -4,-0.7 2,-0.3 0.880 74.5 83.7 62.4 39.0 -7.5 -6.8 -9.3 78 78 A K E