==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 06-APR-06 2DK8 . COMPND 2 MOLECULE: DNA-DIRECTED RNA POLYMERASE III 39 KDA . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5843.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 56.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 11.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 35.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 110 0, 0.0 48,-0.0 0, 0.0 44,-0.0 0.000 360.0 360.0 360.0 80.0 10.5 -8.0 3.0 2 2 A S - 0 0 110 1,-0.1 2,-0.4 43,-0.0 3,-0.1 -0.103 360.0-162.8 -44.1 135.1 8.8 -6.6 6.0 3 3 A S - 0 0 82 1,-0.4 -1,-0.1 0, 0.0 42,-0.1 -0.921 47.2 -47.6-132.1 106.2 11.2 -4.5 8.0 4 4 A G S S- 0 0 72 -2,-0.4 -1,-0.4 2,-0.0 2,-0.0 0.251 95.1 -39.8 55.7 170.7 10.2 -3.6 11.6 5 5 A S - 0 0 126 1,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.334 48.3-145.7 -65.0 145.1 6.8 -2.3 12.6 6 6 A S - 0 0 46 1,-0.1 -1,-0.1 39,-0.0 40,-0.1 0.973 36.5-139.9 -75.0 -60.0 5.3 0.2 10.2 7 7 A G - 0 0 38 2,-0.0 2,-2.5 3,-0.0 -1,-0.1 -0.598 39.5 -38.4 122.5 176.3 3.5 2.4 12.7 8 8 A P S S+ 0 0 151 0, 0.0 2,-0.4 0, 0.0 3,-0.1 -0.445 87.9 127.1 -75.0 71.1 0.1 4.2 13.1 9 9 A D S S- 0 0 45 -2,-2.5 34,-0.2 1,-0.3 -2,-0.0 -0.887 80.9 -31.4-134.2 101.3 0.0 5.3 9.5 10 10 A A S S- 0 0 52 -2,-0.4 -1,-0.3 32,-0.1 33,-0.1 0.918 85.6 -99.2 53.6 100.0 -3.1 4.4 7.6 11 11 A D > - 0 0 108 -3,-0.1 4,-1.4 1,-0.1 5,-0.1 0.084 26.9-125.1 -40.9 159.0 -4.5 1.2 9.0 12 12 A P H > S+ 0 0 60 0, 0.0 4,-3.0 0, 0.0 5,-0.2 0.976 106.0 51.9 -75.0 -61.3 -3.7 -2.0 7.0 13 13 A V H > S+ 0 0 72 1,-0.3 4,-4.2 2,-0.2 5,-0.3 0.889 110.4 52.2 -40.1 -52.8 -7.2 -3.4 6.5 14 14 A E H > S+ 0 0 130 2,-0.2 4,-3.2 1,-0.2 -1,-0.3 0.941 110.1 46.9 -49.9 -56.7 -8.1 0.0 5.1 15 15 A I H X S+ 0 0 5 -4,-1.4 4,-1.9 2,-0.2 -2,-0.2 0.939 116.7 44.8 -51.0 -54.0 -5.2 0.1 2.7 16 16 A E H >X S+ 0 0 11 -4,-3.0 4,-2.2 1,-0.2 3,-0.6 0.962 111.6 51.3 -54.8 -58.4 -6.0 -3.5 1.6 17 17 A N H 3X S+ 0 0 82 -4,-4.2 4,-2.8 1,-0.3 5,-0.3 0.896 106.6 56.6 -45.2 -48.4 -9.7 -2.8 1.3 18 18 A R H 3X S+ 0 0 96 -4,-3.2 4,-1.6 -5,-0.3 -1,-0.3 0.904 106.3 49.0 -50.6 -47.3 -8.9 0.2 -0.8 19 19 A I H > -A 70 0A 61 -2,-0.4 3,-1.5 39,-0.2 4,-1.4 -0.650 28.6-113.4 -91.3 146.9 -0.5 -1.4 -11.7 32 32 A D H 3> S+ 0 0 56 37,-0.6 4,-1.8 1,-0.3 -1,-0.1 0.853 120.3 60.4 -41.8 -42.5 1.5 -0.1 -8.8 33 33 A Q H 3> S+ 0 0 131 2,-0.2 4,-2.1 1,-0.2 -1,-0.3 0.903 102.2 52.0 -53.3 -45.8 1.5 3.2 -10.6 34 34 A V H X> S+ 0 0 40 -3,-1.5 4,-2.7 1,-0.3 3,-0.7 0.978 108.3 47.5 -54.5 -64.1 -2.3 3.3 -10.5 35 35 A I H 3X S+ 0 0 0 -4,-1.4 4,-3.1 1,-0.3 -1,-0.3 0.786 109.6 59.7 -48.2 -28.8 -2.5 2.7 -6.7 36 36 A Q H 3< S+ 0 0 78 -4,-1.8 -1,-0.3 -5,-0.4 -2,-0.2 0.943 108.8 38.9 -65.8 -50.1 0.1 5.4 -6.7 37 37 A N H << S+ 0 0 143 -4,-2.1 -2,-0.2 -3,-0.7 -1,-0.2 0.760 120.6 48.8 -70.7 -25.6 -2.1 8.0 -8.3 38 38 A E H < S+ 0 0 80 -4,-2.7 -2,-0.2 -5,-0.2 -1,-0.2 0.826 135.4 8.7 -81.4 -35.3 -5.0 6.6 -6.3 39 39 A M >< + 0 0 5 -4,-3.1 3,-1.0 -5,-0.3 -1,-0.2 -0.495 66.4 156.5-147.9 70.7 -3.0 6.7 -3.0 40 40 A P T 3 S+ 0 0 92 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 0.444 77.0 65.3 -74.9 0.2 0.3 8.5 -3.5 41 41 A H T 3 S+ 0 0 137 -5,-0.1 -5,-0.1 2,-0.1 -4,-0.1 0.708 80.6 99.0 -91.7 -25.8 0.1 9.2 0.3 42 42 A I S < S- 0 0 14 -3,-1.0 2,-0.2 -7,-0.2 -32,-0.1 -0.097 79.2-108.0 -57.7 161.4 0.5 5.5 1.1 43 43 A E > - 0 0 98 -34,-0.2 4,-3.4 -33,-0.1 5,-0.2 -0.531 17.4-118.2 -92.7 161.0 3.9 4.2 2.1 44 44 A A H > S+ 0 0 63 2,-0.2 4,-2.2 1,-0.2 5,-0.2 0.946 118.8 37.7 -61.0 -50.7 6.1 2.0 0.1 45 45 A Q H > S+ 0 0 90 2,-0.2 4,-4.1 1,-0.2 -1,-0.2 0.891 117.4 51.8 -67.5 -41.4 6.0 -0.8 2.7 46 46 A Q H > S+ 0 0 15 2,-0.2 4,-2.4 1,-0.2 5,-0.3 0.907 110.2 49.0 -61.2 -44.1 2.3 -0.1 3.4 47 47 A R H X S+ 0 0 42 -4,-3.4 4,-1.9 2,-0.2 -2,-0.2 0.930 118.7 38.7 -61.1 -48.3 1.5 -0.3 -0.3 48 48 A A H X S+ 0 0 49 -4,-2.2 4,-4.2 -5,-0.2 5,-0.4 0.967 113.6 55.3 -66.3 -55.0 3.4 -3.6 -0.7 49 49 A V H X S+ 0 0 40 -4,-4.1 4,-4.2 1,-0.3 5,-0.2 0.926 111.0 43.5 -40.6 -67.9 2.3 -5.0 2.6 50 50 A A H X S+ 0 0 0 -4,-2.4 4,-3.5 1,-0.2 -1,-0.3 0.896 117.5 48.8 -45.5 -48.4 -1.4 -4.5 1.8 51 51 A I H X S+ 0 0 11 -4,-1.9 4,-3.5 -5,-0.3 -2,-0.2 0.979 113.4 43.9 -56.1 -62.5 -0.6 -5.9 -1.6 52 52 A N H X S+ 0 0 92 -4,-4.2 4,-3.2 1,-0.2 -2,-0.2 0.901 114.7 52.7 -48.9 -46.8 1.3 -8.9 -0.3 53 53 A R H X S+ 0 0 110 -4,-4.2 4,-4.3 -5,-0.4 5,-0.3 0.959 111.6 43.1 -53.9 -58.3 -1.4 -9.3 2.2 54 54 A L H X>S+ 0 0 0 -4,-3.5 4,-2.2 1,-0.2 5,-1.8 0.887 112.9 55.3 -55.3 -41.7 -4.2 -9.3 -0.3 55 55 A L H <5S+ 0 0 36 -4,-3.5 -1,-0.2 -5,-0.2 -2,-0.2 0.941 117.9 33.6 -56.4 -51.2 -2.0 -11.6 -2.5 56 56 A S H <5S+ 0 0 100 -4,-3.2 -2,-0.2 1,-0.2 -3,-0.2 0.976 112.0 59.9 -68.8 -58.1 -1.7 -14.1 0.3 57 57 A M H <5S- 0 0 114 -4,-4.3 -1,-0.2 -5,-0.2 -2,-0.2 0.817 111.8-120.9 -37.6 -41.6 -5.2 -13.5 1.8 58 58 A G T <5S+ 0 0 28 -4,-2.2 -3,-0.2 -5,-0.3 -1,-0.2 0.590 88.1 103.8 103.7 18.1 -6.5 -14.6 -1.6 59 59 A Q S