==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 12-APR-06 2DKL . COMPND 2 MOLECULE: TRINUCLEOTIDE REPEAT CONTAINING 6C PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.ZHAO,T.KIGAWA,M.YONEYAMA,S.KOSHIBA,T.HARADA,S.WATANABE, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8132.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 34.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.8 26.5 36.7 -27.8 2 2 A S - 0 0 127 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.754 360.0-166.0-160.3 106.6 26.8 33.8 -25.3 3 3 A S - 0 0 109 -2,-0.2 0, 0.0 1,-0.2 0, 0.0 -0.569 37.5 -84.2 -93.0 157.6 30.1 32.5 -23.8 4 4 A G - 0 0 75 -2,-0.2 2,-0.3 1,-0.0 -1,-0.2 -0.014 46.5-168.8 -53.7 163.1 30.5 29.2 -22.0 5 5 A S - 0 0 121 2,-0.0 2,-0.3 0, 0.0 -1,-0.0 -0.979 11.6-144.7-158.8 144.5 29.7 28.9 -18.3 6 6 A S + 0 0 122 -2,-0.3 2,-0.2 1,-0.0 0, 0.0 -0.734 19.9 173.1-110.3 159.9 30.1 26.4 -15.5 7 7 A G - 0 0 68 -2,-0.3 2,-0.3 0, 0.0 -1,-0.0 -0.669 37.8 -56.4-143.8-161.6 27.9 25.5 -12.6 8 8 A G - 0 0 87 -2,-0.2 2,-0.3 0, 0.0 0, 0.0 -0.704 46.1-169.5 -93.2 141.8 27.4 23.1 -9.6 9 9 A M - 0 0 176 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.824 5.4-179.4-125.2 164.7 27.3 19.3 -10.0 10 10 A K - 0 0 199 -2,-0.3 2,-0.3 3,-0.0 3,-0.0 -0.914 13.0-137.5-152.0 176.4 26.5 16.4 -7.8 11 11 A T - 0 0 132 -2,-0.3 2,-0.0 1,-0.0 -2,-0.0 -0.825 49.7 -52.2-135.8 174.3 26.3 12.6 -7.7 12 12 A S - 0 0 97 -2,-0.3 3,-0.1 1,-0.1 -1,-0.0 -0.260 65.6-121.7 -51.2 118.6 24.0 9.8 -6.5 13 13 A G - 0 0 53 1,-0.1 -1,-0.1 -2,-0.0 3,-0.1 -0.054 51.4 -52.3 -59.1 165.7 23.3 10.5 -2.8 14 14 A K - 0 0 178 1,-0.2 2,-1.2 2,-0.0 -1,-0.1 0.041 59.5-115.3 -37.7 144.6 24.2 8.0 -0.1 15 15 A Q + 0 0 128 -3,-0.1 2,-0.5 4,-0.0 -1,-0.2 -0.717 52.5 155.6 -92.4 90.3 22.8 4.6 -0.7 16 16 A D >> - 0 0 80 -2,-1.2 4,-1.6 1,-0.1 3,-0.6 -0.969 44.6-143.7-121.6 123.0 20.4 4.0 2.1 17 17 A E H 3> S+ 0 0 128 -2,-0.5 4,-2.8 1,-0.2 -1,-0.1 0.793 98.4 71.2 -50.3 -29.3 17.4 1.7 1.9 18 18 A A H 3> S+ 0 0 82 1,-0.2 4,-0.8 2,-0.2 3,-0.3 0.966 101.0 39.2 -52.1 -62.2 15.5 4.2 3.9 19 19 A W H X> S+ 0 0 105 -3,-0.6 4,-0.8 1,-0.2 3,-0.6 0.844 114.6 56.8 -58.2 -34.7 15.3 6.8 1.2 20 20 A I H >X S+ 0 0 44 -4,-1.6 4,-1.0 1,-0.2 3,-0.8 0.899 89.6 72.3 -64.2 -41.9 14.6 4.0 -1.3 21 21 A M H 3X S+ 0 0 17 -4,-2.8 4,-1.4 -3,-0.3 3,-0.3 0.850 93.6 57.2 -40.4 -43.2 11.6 2.8 0.7 22 22 A S H XX S+ 0 0 73 -4,-0.8 4,-2.9 -3,-0.6 3,-0.7 0.940 93.9 65.5 -55.9 -51.5 9.8 5.9 -0.6 23 23 A R H X S+ 0 0 71 -4,-0.9 4,-1.9 -3,-0.4 3,-1.2 0.994 110.9 45.7 -65.9 -64.9 3.6 3.9 -6.6 28 28 A L H 3X>S+ 0 0 0 -4,-1.3 4,-1.7 1,-0.3 5,-1.4 0.848 114.4 52.1 -47.0 -38.1 1.2 2.6 -3.9 29 29 A T H 3<5S+ 0 0 60 -4,-3.2 -1,-0.3 1,-0.2 -2,-0.2 0.827 105.5 54.6 -69.4 -32.2 0.4 6.3 -3.2 30 30 A D H <<5S+ 0 0 70 -4,-1.3 -2,-0.2 -3,-1.2 -1,-0.2 0.859 106.9 52.0 -69.3 -36.4 -0.3 6.9 -6.9 31 31 A M H <5S- 0 0 51 -4,-1.9 -2,-0.2 2,-0.1 -3,-0.1 0.994 128.9 -81.3 -63.5 -65.2 -2.8 4.1 -7.0 32 32 A G T <5S+ 0 0 57 -4,-1.7 -3,-0.2 1,-0.1 -2,-0.1 0.332 87.6 111.5 161.6 38.4 -5.0 5.2 -4.1 33 33 A F < - 0 0 52 -5,-1.4 -1,-0.1 3,-0.0 -2,-0.1 -0.973 62.1-110.4-132.4 145.4 -3.5 4.0 -0.8 34 34 A P > - 0 0 73 0, 0.0 4,-1.5 0, 0.0 5,-0.1 -0.292 22.9-123.4 -69.8 155.0 -1.9 5.9 2.2 35 35 A R H > S+ 0 0 187 1,-0.2 4,-1.7 2,-0.2 5,-0.2 0.723 101.7 79.0 -70.6 -21.3 1.8 5.7 2.9 36 36 A E H > S+ 0 0 150 2,-0.2 4,-1.0 1,-0.2 -1,-0.2 0.964 107.5 23.4 -49.2 -64.2 0.9 4.5 6.4 37 37 A P H >> S+ 0 0 44 0, 0.0 4,-3.0 0, 0.0 3,-0.9 0.946 117.9 60.9 -69.8 -51.0 0.2 0.9 5.3 38 38 A A H 3X S+ 0 0 0 -4,-1.5 4,-0.8 1,-0.3 -2,-0.2 0.764 109.3 47.3 -48.7 -26.2 2.3 0.9 2.2 39 39 A E H 3X S+ 0 0 84 -4,-1.7 4,-0.9 -3,-0.2 -1,-0.3 0.790 116.2 42.4 -86.2 -31.5 5.2 1.7 4.5 40 40 A E H X S+ 0 0 17 -4,-3.0 4,-2.3 2,-0.2 3,-1.6 0.970 109.8 57.2 -57.2 -58.7 3.5 -3.8 4.5 42 42 A L H ><>S+ 0 0 0 -4,-0.8 5,-2.2 -5,-0.4 3,-1.2 0.898 105.4 50.0 -37.1 -63.7 6.4 -3.2 2.2 43 43 A K H ><5S+ 0 0 146 -4,-0.9 3,-0.5 1,-0.3 -1,-0.3 0.815 117.5 42.6 -47.8 -33.0 8.9 -3.6 5.0 44 44 A S H <<5S+ 0 0 106 -3,-1.6 -1,-0.3 -4,-1.1 -2,-0.3 0.678 108.2 59.5 -87.6 -20.3 7.1 -6.9 5.7 45 45 A N T <<5S- 0 0 26 -4,-2.3 -1,-0.2 -3,-1.2 -2,-0.2 0.098 118.8-107.8 -94.4 21.8 6.8 -7.8 2.0 46 46 A N T < 5S- 0 0 129 -3,-0.5 -3,-0.2 -5,-0.2 -2,-0.1 0.870 76.7 -54.4 54.6 38.9 10.5 -7.7 1.7 47 47 A M S - 0 0 56 -6,-0.5 4,-0.7 1,-0.2 -1,-0.2 -0.853 36.1-165.3-110.3 144.3 7.8 -6.0 -2.8 49 49 A L H > S+ 0 0 45 -2,-0.4 4,-3.0 2,-0.2 5,-0.3 0.935 90.3 41.2 -88.3 -63.1 5.1 -4.1 -4.7 50 50 A D H > S+ 0 0 105 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.890 118.3 50.5 -52.6 -43.1 2.8 -6.9 -6.0 51 51 A Q H > S+ 0 0 97 2,-0.2 4,-1.6 -6,-0.2 -1,-0.2 0.963 115.7 40.0 -60.9 -54.7 3.0 -8.6 -2.7 52 52 A A H >X S+ 0 0 0 -4,-0.7 4,-1.9 2,-0.2 3,-0.8 0.977 111.0 56.7 -59.0 -59.7 2.2 -5.5 -0.6 53 53 A M H >X S+ 0 0 18 -4,-3.0 4,-2.4 1,-0.3 3,-0.9 0.885 110.4 45.1 -37.4 -57.2 -0.5 -4.2 -3.0 54 54 A S H 3X S+ 0 0 57 -4,-1.9 4,-2.8 -5,-0.3 -1,-0.3 0.852 110.8 54.8 -58.7 -35.6 -2.4 -7.5 -2.6 55 55 A A H << S+ 0 0 37 -4,-1.6 4,-0.3 -3,-0.8 -1,-0.3 0.745 112.1 44.2 -70.0 -23.6 -1.8 -7.4 1.1 56 56 A L H - 0 0 83 -2,-0.2 3,-1.8 1,-0.0 4,-0.1 -0.869 64.3 -73.4-104.6 107.2 -0.1 0.6 -13.1 69 69 A G T 3 S+ 0 0 60 -2,-0.7 -1,-0.0 1,-0.3 -38,-0.0 -0.063 119.2 1.1 44.5-141.1 -1.1 3.9 -14.7 70 70 A V T 3 S- 0 0 126 1,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.819 80.4-177.7 -41.9 -36.4 -2.0 3.6 -18.4 71 71 A T < + 0 0 80 -3,-1.8 2,-0.8 1,-0.2 -1,-0.2 0.810 18.5 161.6 35.1 40.4 -1.3 -0.1 -18.0 72 72 A D - 0 0 117 -4,-0.1 -1,-0.2 1,-0.0 -2,-0.1 -0.802 42.1-121.0 -94.5 106.5 -2.1 -0.4 -21.7 73 73 A H - 0 0 175 -2,-0.8 2,-0.4 -3,-0.1 -1,-0.0 -0.041 31.9-160.7 -42.8 141.9 -0.6 -3.6 -23.1 74 74 A N + 0 0 155 1,-0.1 -1,-0.1 2,-0.0 0, 0.0 -0.989 38.6 117.9-134.3 142.0 1.9 -3.0 -25.9 75 75 A G + 0 0 83 -2,-0.4 2,-0.3 0, 0.0 -1,-0.1 0.215 34.3 131.2 164.1 55.3 3.2 -5.3 -28.6 76 76 A M + 0 0 164 2,-0.0 2,-0.2 0, 0.0 -2,-0.0 -0.910 16.3 162.4-124.0 151.1 2.4 -4.2 -32.1 77 77 A A - 0 0 75 -2,-0.3 2,-0.7 2,-0.1 0, 0.0 -0.696 39.3-121.9-170.2 111.7 4.6 -3.9 -35.2 78 78 A A + 0 0 104 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.400 62.7 125.9 -59.5 104.6 3.7 -3.7 -38.9 79 79 A K - 0 0 187 -2,-0.7 2,-0.4 2,-0.0 -2,-0.1 -0.985 40.5-157.5-161.0 153.2 5.5 -6.6 -40.4 80 80 A S - 0 0 93 -2,-0.3 -2,-0.0 2,-0.0 0, 0.0 -0.997 4.5-172.4-140.4 133.5 4.9 -9.7 -42.5 81 81 A G - 0 0 73 -2,-0.4 2,-0.0 2,-0.0 -2,-0.0 -0.677 15.2-172.4-127.9 79.8 6.9 -12.9 -42.9 82 82 A P - 0 0 115 0, 0.0 2,-0.2 0, 0.0 -2,-0.0 -0.329 17.1-129.3 -69.8 151.0 5.5 -15.1 -45.7 83 83 A S - 0 0 121 1,-0.1 -2,-0.0 -2,-0.0 0, 0.0 -0.525 14.7-165.5 -98.3 167.2 6.8 -18.7 -46.2 84 84 A S 0 0 139 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 0.720 360.0 360.0-116.6 -52.2 8.0 -20.3 -49.4 85 85 A G 0 0 123 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.589 360.0 360.0 169.3 360.0 8.2 -24.1 -48.8