==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CONTRACTILE PROTEIN 14-APR-06 2DKU . COMPND 2 MOLECULE: KIAA1556 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.NAGASHIMA,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7016.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 57.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 26.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 18.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 2,-0.3 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 137.6 13.7 29.1 -1.6 2 2 A S + 0 0 123 1,-0.2 3,-0.1 0, 0.0 0, 0.0 -0.844 360.0 9.7-110.4 145.9 11.9 32.4 -2.0 3 3 A S S S+ 0 0 138 -2,-0.3 2,-0.3 1,-0.2 -1,-0.2 0.878 96.9 138.9 57.7 39.3 9.8 33.5 -5.0 4 4 A G - 0 0 65 -3,-0.3 -1,-0.2 1,-0.1 3,-0.1 -0.815 48.0-158.5-116.2 157.0 9.9 29.9 -6.3 5 5 A S S S+ 0 0 129 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.897 77.6 57.8 -94.5 -59.3 7.2 27.7 -7.9 6 6 A S + 0 0 111 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.576 66.0 176.3 -78.1 133.9 8.5 24.1 -7.4 7 7 A G - 0 0 53 -2,-0.3 77,-0.0 -3,-0.1 27,-0.0 -0.981 36.4-100.3-144.6 129.9 9.2 23.1 -3.8 8 8 A A - 0 0 79 -2,-0.4 2,-0.2 1,-0.1 76,-0.0 -0.074 42.0-144.0 -44.0 138.6 10.3 19.8 -2.2 9 9 A N - 0 0 15 24,-0.0 2,-0.3 25,-0.0 -1,-0.1 -0.703 18.1-176.4-108.5 161.6 7.4 17.9 -0.7 10 10 A C - 0 0 68 -2,-0.2 23,-2.6 75,-0.1 2,-0.6 -0.923 30.0-100.8-148.4 171.4 7.1 15.8 2.4 11 11 A F - 0 0 34 -2,-0.3 3,-0.3 21,-0.3 21,-0.3 -0.885 22.1-175.2-104.4 119.5 4.8 13.5 4.4 12 12 A T S S+ 0 0 74 -2,-0.6 2,-0.4 1,-0.3 -1,-0.2 0.843 83.5 29.7 -78.4 -35.4 3.1 15.1 7.4 13 13 A E S S- 0 0 119 18,-0.3 18,-1.4 0, 0.0 -1,-0.3 -0.868 82.3-148.1-131.1 99.3 1.4 11.8 8.5 14 14 A E - 0 0 153 -2,-0.4 15,-0.1 -3,-0.3 75,-0.1 -0.160 32.1 -92.0 -60.7 157.5 3.2 8.6 7.5 15 15 A L - 0 0 18 73,-0.2 2,-0.3 16,-0.1 15,-0.1 0.166 36.1-127.7 -58.2-175.0 1.1 5.5 6.7 16 16 A T - 0 0 84 13,-0.2 13,-0.2 74,-0.0 73,-0.1 -0.906 24.7-105.0-147.6 114.9 0.2 2.9 9.4 17 17 A N - 0 0 96 -2,-0.3 2,-0.3 71,-0.1 74,-0.2 -0.005 41.5-149.3 -36.6 130.3 0.7 -0.9 9.2 18 18 A L E -a 91 0A 31 72,-2.2 74,-1.1 2,-0.0 2,-0.4 -0.780 12.7-163.4-109.7 154.2 -2.6 -2.5 8.4 19 19 A Q E +a 92 0A 125 -2,-0.3 2,-0.3 72,-0.2 74,-0.2 -0.907 27.5 134.8-141.8 110.4 -3.8 -6.0 9.5 20 20 A V E -a 93 0A 40 72,-2.6 74,-2.7 -2,-0.4 3,-0.1 -0.930 50.3 -89.7-147.2 169.4 -6.8 -7.7 7.9 21 21 A E E > -a 94 0A 88 -2,-0.3 3,-0.8 72,-0.3 4,-0.2 -0.347 54.8 -83.4 -79.7 163.3 -8.0 -11.1 6.5 22 22 A E T 3 S+ 0 0 59 72,-1.8 49,-0.2 1,-0.2 74,-0.1 -0.280 113.3 24.4 -65.4 151.1 -7.5 -12.1 2.8 23 23 A K T 3 S+ 0 0 144 47,-1.5 -1,-0.2 45,-0.1 46,-0.2 0.806 103.0 110.3 63.7 29.6 -10.1 -11.0 0.3 24 24 A G S < S- 0 0 22 -3,-0.8 45,-1.0 44,-0.1 46,-0.2 0.422 74.8 -88.0-101.4-122.4 -10.9 -8.0 2.5 25 25 A T E -B 68 0B 76 43,-0.2 2,-0.5 -4,-0.2 43,-0.2 -0.693 31.6-173.6-165.5 105.8 -10.2 -4.3 2.0 26 26 A A E -B 67 0B 3 41,-2.9 41,-2.5 -2,-0.2 2,-0.6 -0.910 3.1-170.3-108.3 121.9 -7.1 -2.5 3.0 27 27 A V E -B 66 0B 47 -2,-0.5 2,-1.1 39,-0.3 39,-0.2 -0.885 12.5-151.3-114.6 101.8 -7.0 1.3 2.6 28 28 A F E -B 65 0B 0 37,-1.7 37,-0.9 -2,-0.6 2,-0.4 -0.579 18.5-163.8 -73.9 99.2 -3.5 2.8 3.1 29 29 A T E +B 64 0B 74 -2,-1.1 2,-0.3 35,-0.2 35,-0.2 -0.702 18.5 156.9 -88.8 134.4 -4.3 6.3 4.4 30 30 A C E -B 63 0B 6 33,-3.0 33,-1.9 -2,-0.4 2,-0.3 -0.866 25.0-140.8-145.0 177.3 -1.6 8.9 4.4 31 31 A K E -B 62 0B 69 -18,-1.4 2,-0.3 -2,-0.3 -18,-0.3 -0.930 7.7-159.6-141.7 164.7 -1.0 12.7 4.3 32 32 A T - 0 0 1 29,-2.1 -21,-0.3 -2,-0.3 -23,-0.0 -0.979 27.9-128.4-145.8 156.6 1.3 15.3 2.7 33 33 A E S S+ 0 0 97 -23,-2.6 -22,-0.1 -2,-0.3 -1,-0.1 0.792 98.2 30.5 -74.3 -28.9 2.5 18.8 3.3 34 34 A H S S- 0 0 82 -24,-0.5 2,-1.5 27,-0.1 -1,-0.1 -0.940 95.8 -95.7-132.0 153.6 1.6 19.8 -0.3 35 35 A P - 0 0 82 0, 0.0 26,-0.1 0, 0.0 2,-0.1 -0.499 43.6-139.0 -69.7 90.0 -1.0 18.7 -2.8 36 36 A A - 0 0 5 -2,-1.5 24,-0.1 24,-0.2 47,-0.1 -0.304 3.5-149.7 -53.9 118.9 1.0 16.1 -4.8 37 37 A A S S+ 0 0 99 1,-0.1 2,-0.3 -2,-0.1 -1,-0.2 0.742 82.4 17.5 -63.2 -22.7 0.0 16.6 -8.5 38 38 A T - 0 0 85 44,-0.6 2,-0.4 2,-0.0 -1,-0.1 -0.996 64.7-159.1-150.6 150.1 0.7 12.9 -9.0 39 39 A V - 0 0 31 -2,-0.3 2,-0.6 44,-0.1 43,-0.2 -0.979 2.0-170.1-136.9 123.1 1.0 9.8 -6.8 40 40 A T E -D 81 0C 45 41,-1.7 41,-1.3 -2,-0.4 2,-0.1 -0.875 13.3-158.4-115.8 99.6 2.7 6.5 -7.8 41 41 A W E -D 80 0C 5 -2,-0.6 7,-3.1 39,-0.2 2,-0.4 -0.456 5.5-156.1 -75.6 146.9 2.1 3.7 -5.4 42 42 A R E -DE 79 47C 116 37,-1.9 37,-2.5 5,-0.2 2,-0.5 -0.988 6.8-164.9-129.4 133.5 4.5 0.7 -5.3 43 43 A K E S-D 78 0C 44 3,-2.4 35,-0.2 -2,-0.4 31,-0.0 -0.959 72.3 -23.5-121.1 117.7 3.8 -2.8 -4.1 44 44 A G S S- 0 0 33 33,-1.1 -1,-0.2 -2,-0.5 34,-0.1 0.957 129.3 -42.5 48.1 66.1 6.7 -5.2 -3.4 45 45 A L S S+ 0 0 159 32,-0.4 2,-0.3 1,-0.2 -1,-0.2 0.826 121.6 116.2 51.5 33.6 9.2 -3.5 -5.6 46 46 A L - 0 0 97 0, 0.0 -3,-2.4 0, 0.0 2,-0.5 -0.974 69.7-117.0-133.9 147.6 6.5 -3.1 -8.2 47 47 A E B -E 42 0C 145 -2,-0.3 -5,-0.2 -5,-0.2 2,-0.2 -0.716 30.4-150.7 -86.5 124.8 4.7 -0.2 -9.7 48 48 A L - 0 0 13 -7,-3.1 2,-0.3 -2,-0.5 -7,-0.1 -0.552 9.5-163.5 -92.5 158.8 0.9 0.0 -9.0 49 49 A R - 0 0 162 -2,-0.2 5,-0.4 -9,-0.1 2,-0.2 -0.999 38.4 -84.5-144.9 142.3 -1.7 1.5 -11.2 50 50 A A S S+ 0 0 65 -2,-0.3 2,-0.3 3,-0.1 5,-0.2 -0.213 75.0 136.3 -46.8 104.6 -5.3 2.7 -10.7 51 51 A S S S- 0 0 46 3,-2.4 -3,-0.0 -2,-0.2 -1,-0.0 -0.890 74.2 -78.9-146.2 175.0 -7.2 -0.6 -11.1 52 52 A G S S+ 0 0 81 -2,-0.3 16,-0.3 1,-0.2 3,-0.2 0.751 132.5 39.0 -49.8 -24.6 -10.0 -2.7 -9.6 53 53 A K S S+ 0 0 47 1,-0.3 15,-1.1 -4,-0.2 2,-0.9 0.925 122.6 34.4 -90.0 -62.4 -7.4 -3.7 -7.0 54 54 A H E +C 67 0B 11 -5,-0.4 -3,-2.4 13,-0.2 -1,-0.3 -0.821 66.7 169.4-100.8 99.4 -5.4 -0.5 -6.3 55 55 A Q E -C 66 0B 108 11,-2.0 11,-1.4 -2,-0.9 -5,-0.1 -0.767 13.7-174.1-113.0 85.9 -7.8 2.5 -6.5 56 56 A P E -C 65 0B 37 0, 0.0 2,-0.3 0, 0.0 9,-0.2 -0.072 0.9-169.5 -69.7 174.7 -5.9 5.5 -5.2 57 57 A S E -C 64 0B 57 7,-0.9 7,-0.6 -7,-0.0 2,-0.3 -0.928 18.2-133.1-156.0 177.1 -7.4 9.0 -4.7 58 58 A Q E +C 63 0B 95 -2,-0.3 2,-0.2 5,-0.2 5,-0.2 -0.887 19.8 169.7-147.6 111.8 -6.5 12.6 -3.9 59 59 A E E > -C 62 0B 103 3,-2.6 2,-1.0 -2,-0.3 3,-0.8 -0.528 64.1 -85.7-120.2 63.8 -8.3 14.8 -1.3 60 60 A G T 3 S- 0 0 44 -2,-0.2 -24,-0.2 1,-0.2 -1,-0.1 -0.623 112.4 -2.3 77.7-102.7 -6.1 17.9 -1.1 61 61 A L T 3 S+ 0 0 69 -2,-1.0 -29,-2.1 -26,-0.1 2,-0.5 0.232 123.2 81.8-106.5 10.8 -3.5 17.1 1.5 62 62 A T E < -BC 31 59B 59 -3,-0.8 -3,-2.6 -31,-0.2 2,-0.3 -0.972 56.5-175.7-122.6 127.9 -4.9 13.6 2.2 63 63 A L E +BC 30 58B 0 -33,-1.9 -33,-3.0 -2,-0.5 2,-0.3 -0.857 4.3 173.6-120.4 155.9 -4.2 10.5 0.1 64 64 A R E -BC 29 57B 107 -7,-0.6 -7,-0.9 -2,-0.3 2,-0.5 -0.975 18.8-152.4-160.5 145.6 -5.5 6.9 0.3 65 65 A L E -BC 28 56B 0 -37,-0.9 -37,-1.7 -2,-0.3 2,-0.5 -0.934 14.4-148.4-127.6 109.2 -5.4 3.7 -1.7 66 66 A T E -BC 27 55B 41 -11,-1.4 -11,-2.0 -2,-0.5 2,-0.6 -0.630 13.0-168.4 -78.6 123.0 -8.2 1.2 -1.4 67 67 A I E +BC 26 54B 0 -41,-2.5 -41,-2.9 -2,-0.5 3,-0.3 -0.908 10.8 175.2-117.6 105.1 -7.0 -2.4 -1.8 68 68 A S E +B 25 0B 45 -15,-1.1 -43,-0.2 -2,-0.6 -44,-0.1 -0.560 59.2 36.0-102.9 168.9 -9.8 -5.0 -2.3 69 69 A A S S- 0 0 51 -45,-1.0 -1,-0.2 -2,-0.2 -44,-0.1 0.769 83.3-171.9 61.1 25.6 -9.7 -8.7 -3.0 70 70 A L - 0 0 0 -3,-0.3 -47,-1.5 -46,-0.2 2,-0.3 0.124 4.1-172.6 -42.4 164.6 -6.6 -8.8 -0.8 71 71 A E > - 0 0 85 -49,-0.2 4,-0.9 -48,-0.1 3,-0.2 -0.981 43.4 -91.7-159.5 164.4 -4.6 -12.1 -0.7 72 72 A K T 4 S+ 0 0 156 -2,-0.3 3,-0.4 1,-0.2 21,-0.2 0.810 125.9 54.5 -50.2 -31.4 -1.7 -13.8 1.1 73 73 A A T 4 S+ 0 0 54 1,-0.2 -1,-0.2 -3,-0.0 -3,-0.1 0.943 90.4 69.6 -69.2 -49.6 0.5 -12.4 -1.7 74 74 A D T 4 S+ 0 0 1 -3,-0.2 2,-0.4 18,-0.0 -1,-0.2 0.775 73.1 111.8 -38.8 -30.9 -0.6 -8.8 -1.1 75 75 A S < + 0 0 39 -4,-0.9 2,-0.3 -3,-0.4 17,-0.1 -0.295 52.8 96.7 -52.5 103.7 1.4 -9.2 2.1 76 76 A D S S- 0 0 76 -2,-0.4 15,-1.0 13,-0.1 2,-0.7 -0.970 80.0 -69.8-173.2 179.8 4.4 -6.9 1.4 77 77 A T E - F 0 90C 59 -2,-0.3 -33,-1.1 13,-0.2 -32,-0.4 -0.808 46.2-160.5 -94.3 114.3 5.9 -3.4 1.9 78 78 A Y E -DF 43 89C 0 11,-1.9 11,-1.4 -2,-0.7 2,-0.4 -0.619 2.9-154.2 -93.2 152.6 4.0 -0.7 -0.0 79 79 A T E -D 42 0C 15 -37,-2.5 -37,-1.9 -2,-0.2 2,-1.0 -0.967 4.7-152.7-132.2 117.9 5.5 2.7 -0.9 80 80 A C E -D 41 0C 0 -2,-0.4 7,-1.6 7,-0.3 2,-0.3 -0.761 20.2-170.7 -91.8 100.5 3.4 5.8 -1.6 81 81 A D E +DG 40 86C 38 -41,-1.3 -41,-1.7 -2,-1.0 5,-0.2 -0.688 20.2 172.0 -92.9 144.1 5.3 8.0 -3.9 82 82 A I - 0 0 9 3,-1.7 -44,-0.6 -2,-0.3 -1,-0.1 0.538 64.1 -87.2-122.0 -20.0 4.2 11.6 -4.7 83 83 A G S S+ 0 0 44 2,-0.7 3,-0.1 -43,-0.1 -44,-0.1 0.021 118.9 34.9 135.1 -28.6 7.3 12.9 -6.6 84 84 A Q S S+ 0 0 126 1,-0.4 2,-0.3 -77,-0.0 -76,-0.1 0.653 120.8 23.7-121.0 -39.2 9.5 14.2 -3.9 85 85 A A - 0 0 19 -75,-0.1 -3,-1.7 -5,-0.0 -2,-0.7 -0.831 61.3-151.9-128.1 166.8 9.0 11.8 -0.9 86 86 A Q B -G 81 0C 106 -2,-0.3 -5,-0.2 -5,-0.2 2,-0.1 -0.995 6.6-154.0-144.3 135.0 7.8 8.3 -0.4 87 87 A S - 0 0 8 -7,-1.6 2,-0.3 -2,-0.3 -7,-0.3 -0.388 8.0-147.6 -98.7 178.7 6.1 6.6 2.6 88 88 A R + 0 0 183 -9,-0.2 2,-0.3 -2,-0.1 -9,-0.2 -0.995 15.6 172.1-150.9 144.0 6.1 2.9 3.7 89 89 A A E -F 78 0C 2 -11,-1.4 -11,-1.9 -2,-0.3 2,-0.4 -0.990 25.6-127.9-154.1 144.4 3.6 0.6 5.4 90 90 A Q E -F 77 0C 99 -2,-0.3 -72,-2.2 -13,-0.2 2,-0.4 -0.758 21.3-157.9 -96.7 139.3 3.4 -3.1 6.3 91 91 A L E -a 18 0A 10 -15,-1.0 2,-0.5 -2,-0.4 -72,-0.2 -0.923 4.1-161.0-118.6 142.2 0.3 -5.2 5.3 92 92 A L E -a 19 0A 78 -74,-1.1 -72,-2.6 -2,-0.4 2,-1.0 -0.953 1.1-166.2-126.4 113.4 -0.9 -8.4 6.9 93 93 A V E -a 20 0A 9 -2,-0.5 -72,-0.3 -21,-0.2 -71,-0.2 -0.771 16.8-166.9-100.5 91.3 -3.3 -10.7 5.0 94 94 A Q E -a 21 0A 90 -74,-2.7 -72,-1.8 -2,-1.0 2,-0.6 0.058 27.1-102.4 -64.5-178.7 -4.7 -13.2 7.6 95 95 A G - 0 0 24 -74,-0.2 -1,-0.1 1,-0.1 -74,-0.1 -0.846 16.8-158.7-116.6 96.9 -6.6 -16.3 6.6 96 96 A R S S+ 0 0 190 -2,-0.6 2,-0.5 1,-0.2 -1,-0.1 0.751 93.5 48.5 -40.4 -26.6 -10.4 -16.0 7.1 97 97 A R + 0 0 210 -3,-0.1 2,-0.9 2,-0.1 -1,-0.2 -0.886 67.6 177.1-124.0 100.3 -10.2 -19.8 7.2 98 98 A S + 0 0 115 -2,-0.5 -2,-0.0 2,-0.0 -4,-0.0 -0.705 17.5 170.5-103.7 81.2 -7.5 -21.2 9.4 99 99 A G - 0 0 44 -2,-0.9 2,-0.7 1,-0.1 -2,-0.1 -0.557 43.9 -92.3 -91.8 156.6 -8.0 -25.0 9.1 100 100 A P - 0 0 121 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.535 33.6-167.9 -69.8 109.4 -5.6 -27.7 10.4 101 101 A S S S+ 0 0 123 -2,-0.7 2,-1.8 1,-0.2 -2,-0.0 0.966 78.5 62.0 -61.6 -55.4 -3.2 -28.6 7.6 102 102 A S 0 0 130 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.549 360.0 360.0 -76.5 85.7 -1.9 -31.8 9.3 103 103 A G 0 0 113 -2,-1.8 0, 0.0 -3,-0.1 0, 0.0 -0.956 360.0 360.0-139.4 360.0 -5.1 -33.8 9.5