==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 14-APR-06 2DKX . COMPND 2 MOLECULE: SAM POINTED DOMAIN-CONTAINING ETS TRANSCRIPTION . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.K.GORONCY,M.SATO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5850.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 21 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 39.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 126 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -96.0 2.1 0.0 -1.2 2 2 A S + 0 0 131 2,-0.1 2,-0.1 0, 0.0 0, 0.0 0.952 360.0 62.1 -82.1 -58.3 0.1 -1.5 -4.2 3 3 A S + 0 0 75 1,-0.1 3,-0.1 6,-0.0 2,-0.0 -0.396 62.8 168.7 -70.8 146.1 -3.1 -2.6 -2.4 4 4 A G - 0 0 48 1,-0.3 2,-0.2 -2,-0.1 -1,-0.1 0.153 44.5 -13.9-123.3-120.3 -5.2 0.0 -0.7 5 5 A S S > S- 0 0 56 1,-0.2 3,-0.9 84,-0.1 -1,-0.3 -0.642 80.2 -83.6 -94.1 151.3 -8.7 -0.0 0.7 6 6 A S T 3 S+ 0 0 101 -2,-0.2 2,-0.4 1,-0.2 -1,-0.2 0.060 103.9 56.0 -44.7 159.7 -11.3 -2.8 0.1 7 7 A G T > S+ 0 0 46 -3,-0.1 3,-1.1 1,-0.0 4,-0.3 -0.508 96.7 59.8 113.1 -63.8 -13.3 -2.6 -3.1 8 8 A L T X> S+ 0 0 35 -3,-0.9 4,-1.9 -2,-0.4 3,-1.1 0.653 78.1 94.4 -72.9 -15.0 -10.7 -2.5 -5.8 9 9 A K H 3> S+ 0 0 78 -4,-0.3 4,-0.6 1,-0.3 -1,-0.2 0.813 90.6 43.6 -45.4 -33.5 -9.5 -5.8 -4.5 10 10 A D H <> S+ 0 0 127 -3,-1.1 4,-0.6 2,-0.2 -1,-0.3 0.744 105.5 63.8 -84.6 -26.1 -11.7 -7.3 -7.2 11 11 A I H X> S+ 0 0 6 -3,-1.1 3,-2.3 -4,-0.3 4,-0.8 0.957 97.6 53.4 -62.2 -52.9 -10.6 -4.7 -9.8 12 12 A E H >X S+ 0 0 69 -4,-1.9 3,-1.3 1,-0.3 4,-1.2 0.873 101.4 61.3 -50.1 -41.0 -7.0 -5.9 -9.9 13 13 A T H 3X S+ 0 0 75 -4,-0.6 4,-0.7 -5,-0.3 -1,-0.3 0.761 105.9 47.4 -58.7 -24.8 -8.3 -9.4 -10.6 14 14 A A H << S+ 0 0 7 -3,-2.3 -1,-0.3 -4,-0.6 -2,-0.2 0.585 109.6 52.8 -91.6 -13.2 -9.8 -8.0 -13.8 15 15 A C H S+ 0 0 12 -3,-1.3 5,-1.3 -4,-0.8 4,-1.2 0.542 97.4 68.2 -96.8 -10.9 -6.6 -6.2 -14.7 16 16 A K H <5S+ 0 0 130 -4,-1.2 3,-0.2 2,-0.2 -2,-0.1 0.961 107.0 34.8 -72.4 -54.1 -4.5 -9.3 -14.4 17 17 A L T <5S+ 0 0 95 -4,-0.7 -1,-0.2 1,-0.2 -2,-0.1 0.548 123.8 48.8 -77.5 -7.0 -5.9 -11.2 -17.4 18 18 A L T 45S- 0 0 3 2,-0.1 -1,-0.2 -4,-0.1 -2,-0.2 0.602 97.0-140.1-104.4 -18.5 -6.3 -7.9 -19.2 19 19 A N T <5 + 0 0 149 -4,-1.2 2,-0.2 -3,-0.2 -3,-0.2 0.894 59.6 124.2 58.5 41.9 -2.8 -6.6 -18.5 20 20 A I < - 0 0 23 -5,-1.3 2,-0.4 -8,-0.1 -1,-0.2 -0.598 66.5 -86.7-121.0-177.1 -4.1 -3.1 -17.8 21 21 A T - 0 0 58 2,-0.2 5,-0.2 -2,-0.2 6,-0.1 -0.797 26.3-129.7 -98.1 134.8 -4.0 -0.5 -15.0 22 22 A A S S+ 0 0 41 -2,-0.4 68,-0.1 4,-0.1 -1,-0.1 0.796 92.7 86.2 -48.3 -30.5 -6.6 -0.6 -12.2 23 23 A D > - 0 0 39 1,-0.2 3,-1.0 66,-0.1 -2,-0.2 -0.644 64.7-163.2 -79.7 119.4 -7.1 3.1 -13.0 24 24 A P G > S+ 0 0 0 0, 0.0 3,-1.2 0, 0.0 37,-0.2 0.821 89.6 61.7 -69.7 -32.5 -9.7 3.6 -15.8 25 25 A M G 3 S+ 0 0 85 1,-0.3 33,-0.5 33,-0.1 32,-0.1 0.544 103.8 52.3 -71.7 -5.7 -8.6 7.1 -16.5 26 26 A D G < S+ 0 0 86 -3,-1.0 2,-0.4 31,-0.2 -1,-0.3 0.465 73.5 131.5-106.2 -7.1 -5.2 5.6 -17.4 27 27 A W < - 0 0 1 -3,-1.2 30,-2.3 -4,-0.2 31,-0.3 -0.290 50.4-154.8 -51.8 104.1 -6.5 3.1 -19.9 28 28 A S - 0 0 60 -2,-0.4 2,-0.2 28,-0.2 -7,-0.1 -0.988 40.3 -12.6-162.4 157.5 -4.2 3.7 -22.8 29 29 A P S S- 0 0 116 0, 0.0 28,-0.2 0, 0.0 3,-0.2 -0.741 135.6 -30.2 -69.7 -47.1 -3.5 3.7 -25.5 30 30 A S S > S+ 0 0 75 -2,-0.2 3,-1.1 1,-0.1 4,-0.5 -0.134 92.8 128.7-120.8 35.4 -6.5 1.5 -26.3 31 31 A N T >> + 0 0 34 1,-0.3 3,-1.9 2,-0.2 4,-1.5 0.834 60.0 77.0 -59.1 -33.1 -6.8 -0.3 -23.0 32 32 A V H 3> S+ 0 0 1 1,-0.3 4,-1.7 -5,-0.2 -1,-0.3 0.877 85.2 61.8 -44.0 -46.2 -10.4 0.7 -22.9 33 33 A Q H <> S+ 0 0 54 -3,-1.1 4,-2.4 1,-0.2 -1,-0.3 0.852 103.2 51.4 -50.7 -37.7 -11.2 -2.0 -25.4 34 34 A K H <> S+ 0 0 84 -3,-1.9 4,-1.6 -4,-0.5 -1,-0.2 0.954 108.4 47.8 -65.9 -51.7 -9.9 -4.5 -22.9 35 35 A W H X S+ 0 0 2 -4,-1.5 4,-1.2 2,-0.2 -1,-0.2 0.716 115.4 51.2 -62.4 -19.9 -12.1 -3.3 -20.0 36 36 A L H X S+ 0 0 1 -4,-1.7 4,-3.4 -5,-0.3 5,-0.3 0.972 108.6 42.5 -80.1 -69.2 -15.0 -3.4 -22.5 37 37 A L H X S+ 0 0 91 -4,-2.4 4,-0.8 1,-0.2 -2,-0.2 0.759 112.2 64.3 -49.8 -24.9 -14.8 -6.9 -24.0 38 38 A W H >X S+ 0 0 65 -4,-1.6 3,-1.0 -5,-0.3 4,-0.5 0.999 116.1 20.4 -62.8 -73.4 -14.2 -8.0 -20.4 39 39 A T H >X S+ 0 0 3 -4,-1.2 4,-1.7 1,-0.2 3,-1.2 0.824 114.7 72.6 -66.9 -31.8 -17.4 -7.0 -18.8 40 40 A E H 3<>S+ 0 0 44 -4,-3.4 5,-2.5 1,-0.3 4,-0.3 0.802 101.9 44.1 -53.0 -29.8 -19.2 -7.0 -22.2 41 41 A H H <<5S+ 0 0 143 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.2 0.628 111.2 53.8 -89.5 -16.3 -18.9 -10.8 -22.0 42 42 A Q H <<5S+ 0 0 103 -3,-1.2 -2,-0.2 -4,-0.5 -1,-0.2 0.603 120.5 31.2 -91.3 -14.7 -20.0 -10.9 -18.4 43 43 A Y T <5S- 0 0 115 -4,-1.7 -2,-0.2 2,-0.1 -3,-0.2 0.327 107.4-118.5-121.6 1.2 -23.2 -8.9 -19.1 44 44 A R T 5 + 0 0 213 -5,-0.3 -3,-0.2 -4,-0.3 -4,-0.1 0.917 55.1 167.4 59.8 45.3 -23.8 -10.1 -22.7 45 45 A L < - 0 0 17 -5,-2.5 -1,-0.2 -6,-0.2 3,-0.1 -0.551 35.6-102.1 -90.9 156.6 -23.4 -6.6 -24.0 46 46 A P - 0 0 35 0, 0.0 2,-0.9 0, 0.0 -1,-0.1 -0.116 52.7 -72.2 -69.7 170.3 -23.0 -5.7 -27.7 47 47 A P + 0 0 106 0, 0.0 4,-0.2 0, 0.0 3,-0.1 -0.534 58.4 158.7 -69.8 103.1 -19.8 -4.7 -29.4 48 48 A M >> + 0 0 3 -2,-0.9 4,-2.9 2,-0.1 3,-1.6 0.697 51.9 91.5 -96.8 -25.3 -18.9 -1.2 -28.1 49 49 A G H 3> S+ 0 0 11 1,-0.3 4,-0.6 2,-0.2 -1,-0.1 0.794 89.5 51.3 -38.8 -35.3 -15.2 -1.3 -28.9 50 50 A K H 34 S+ 0 0 145 2,-0.2 -1,-0.3 1,-0.2 4,-0.3 0.867 112.3 44.0 -72.9 -37.7 -16.2 0.2 -32.2 51 51 A A H <4 S+ 0 0 17 -3,-1.6 3,-0.3 -4,-0.2 -2,-0.2 0.808 125.4 34.0 -76.2 -31.0 -18.2 3.0 -30.6 52 52 A F H < S+ 0 0 0 -4,-2.9 3,-0.5 1,-0.2 -2,-0.2 0.395 85.0 108.9-102.4 -0.6 -15.5 3.6 -28.0 53 53 A Q S < S+ 0 0 125 -4,-0.6 -1,-0.2 -5,-0.5 -2,-0.1 0.833 90.3 37.8 -43.5 -38.0 -12.7 2.8 -30.4 54 54 A E S S+ 0 0 155 -4,-0.3 -1,-0.3 -3,-0.3 -2,-0.1 0.742 102.9 91.7 -86.4 -26.3 -11.9 6.5 -30.3 55 55 A L - 0 0 13 -3,-0.5 2,-0.2 -4,-0.1 -23,-0.1 -0.329 60.0-164.8 -69.1 151.4 -12.7 6.9 -26.6 56 56 A A > - 0 0 20 -24,-0.1 4,-2.4 -25,-0.1 5,-0.2 -0.660 38.1 -83.2-127.2-176.9 -9.9 6.4 -24.0 57 57 A G H > S+ 0 0 0 -30,-2.3 4,-2.0 -2,-0.2 5,-0.2 0.946 126.9 43.9 -54.0 -54.5 -9.5 5.8 -20.3 58 58 A K H > S+ 0 0 108 -33,-0.5 4,-2.6 -31,-0.3 5,-0.2 0.961 114.2 50.1 -56.2 -56.1 -9.8 9.5 -19.4 59 59 A E H >> S+ 0 0 99 2,-0.2 4,-1.5 1,-0.2 3,-0.8 0.954 108.3 51.2 -46.5 -66.9 -12.8 10.1 -21.7 60 60 A L H >< S+ 0 0 0 -4,-2.4 3,-1.2 1,-0.3 -1,-0.2 0.887 117.5 39.5 -37.1 -58.4 -14.8 7.1 -20.5 61 61 A C H 3< S+ 0 0 27 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.790 115.5 53.9 -65.2 -28.0 -14.4 8.3 -16.9 62 62 A A H << S+ 0 0 74 -4,-2.6 -1,-0.3 -3,-0.8 -2,-0.2 0.548 100.0 82.7 -82.8 -8.2 -14.8 11.8 -18.1 63 63 A M S << S- 0 0 21 -4,-1.5 2,-0.3 -3,-1.2 3,-0.1 -0.198 77.0-120.7 -86.5-178.2 -18.1 10.8 -19.7 64 64 A S >> - 0 0 68 1,-0.1 4,-1.9 -2,-0.0 3,-1.2 -0.943 25.1-106.6-128.7 149.7 -21.6 10.5 -18.2 65 65 A E H 3> S+ 0 0 81 -2,-0.3 4,-1.4 1,-0.3 3,-0.4 0.874 122.6 50.6 -34.0 -61.8 -24.0 7.6 -17.9 66 66 A E H 3> S+ 0 0 119 1,-0.3 4,-1.1 2,-0.2 3,-0.5 0.874 108.1 54.7 -47.3 -42.9 -26.3 9.1 -20.5 67 67 A Q H X> S+ 0 0 66 -3,-1.2 3,-0.9 1,-0.3 4,-0.9 0.927 104.1 52.4 -58.5 -47.6 -23.2 9.5 -22.7 68 68 A F H 3X S+ 0 0 0 -4,-1.9 4,-1.3 -3,-0.4 8,-0.5 0.766 110.6 49.9 -60.5 -25.1 -22.4 5.8 -22.5 69 69 A R H 3< S+ 0 0 111 -4,-1.4 -1,-0.3 -3,-0.5 -2,-0.2 0.677 97.4 68.0 -86.3 -20.0 -26.0 5.1 -23.5 70 70 A Q H << S+ 0 0 129 -4,-1.1 -2,-0.2 -3,-0.9 -1,-0.2 0.753 113.9 29.5 -70.3 -24.4 -25.7 7.5 -26.5 71 71 A R H < S+ 0 0 82 -4,-0.9 -2,-0.2 1,-0.2 -1,-0.2 0.706 132.2 33.2-104.4 -30.2 -23.3 5.1 -28.1 72 72 A S < + 0 0 5 -4,-1.3 -1,-0.2 -5,-0.2 5,-0.2 -0.860 57.0 172.1-134.4 99.4 -24.5 1.8 -26.6 73 73 A P S S+ 0 0 101 0, 0.0 4,-0.2 0, 0.0 -1,-0.1 0.932 84.4 50.9 -69.7 -48.3 -28.3 1.5 -26.0 74 74 A L S S+ 0 0 132 2,-0.1 -5,-0.1 3,-0.1 -2,-0.0 0.749 134.6 10.5 -62.5 -23.2 -28.3 -2.2 -25.0 75 75 A G S > S+ 0 0 6 -7,-0.2 3,-1.6 -6,-0.1 2,-0.6 0.614 82.9 112.3-117.4 -85.3 -25.5 -1.4 -22.6 76 76 A G T >> S+ 0 0 0 -8,-0.5 4,-1.6 1,-0.3 3,-1.2 -0.176 87.0 49.0 45.4 -93.2 -24.6 2.2 -21.8 77 77 A D H 3> S+ 0 0 78 -2,-0.6 4,-1.4 1,-0.3 -1,-0.3 0.819 107.8 60.3 -40.0 -37.7 -25.7 2.2 -18.2 78 78 A V H <> S+ 0 0 29 -3,-1.6 4,-3.2 2,-0.2 5,-0.3 0.939 107.2 42.8 -58.4 -50.1 -23.7 -1.0 -17.9 79 79 A L H <> S+ 0 0 5 -3,-1.2 4,-1.8 1,-0.2 5,-0.3 0.984 115.2 46.5 -60.6 -61.5 -20.4 0.7 -18.9 80 80 A H H X S+ 0 0 34 -4,-1.6 4,-1.1 -15,-0.2 -1,-0.2 0.736 119.4 47.3 -54.1 -22.0 -20.9 3.9 -16.8 81 81 A A H >X S+ 0 0 38 -4,-1.4 4,-1.0 -5,-0.4 3,-0.5 0.961 111.5 42.0 -83.2 -67.5 -21.9 1.4 -14.0 82 82 A H H 3< S+ 0 0 35 -4,-3.2 4,-0.4 1,-0.3 -2,-0.2 0.659 117.7 55.1 -55.4 -14.0 -19.2 -1.3 -14.1 83 83 A L H >X S+ 0 0 0 -4,-1.8 4,-1.9 -5,-0.3 3,-1.8 0.874 90.0 69.1 -86.6 -43.4 -16.9 1.7 -14.5 84 84 A D H S+ 0 0 5 -3,-1.8 4,-2.7 -4,-0.4 3,-0.6 0.987 116.8 44.2 -74.3 -66.2 -13.0 1.6 -11.1 87 87 A K H 3X S+ 0 0 29 -4,-1.9 4,-1.3 1,-0.3 -2,-0.2 0.867 113.8 54.5 -46.3 -42.1 -13.0 5.4 -11.4 88 88 A S H 3< S+ 0 0 73 -4,-2.8 -1,-0.3 -5,-0.4 3,-0.2 0.913 112.6 41.3 -60.3 -44.5 -14.2 5.5 -7.8 89 89 A A H << S+ 0 0 33 -4,-1.2 3,-0.5 -3,-0.6 -1,-0.2 0.766 113.9 53.9 -74.5 -26.3 -11.2 3.4 -6.7 90 90 A A H < S+ 0 0 35 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.660 93.9 71.8 -80.9 -17.2 -8.9 5.3 -9.0 91 91 A S S < S- 0 0 70 -4,-1.3 -1,-0.2 -5,-0.3 -2,-0.1 -0.099 121.1 -82.0 -89.8 36.2 -9.9 8.6 -7.4 92 92 A G - 0 0 24 -3,-0.5 -1,-0.3 4,-0.2 4,-0.2 0.305 36.5 -99.7 78.3 149.5 -8.1 7.8 -4.2 93 93 A P S S- 0 0 105 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.902 112.0 -4.6 -69.8 -43.3 -9.2 5.6 -1.3 94 94 A S S S+ 0 0 111 1,-0.3 2,-0.4 -89,-0.0 -2,-0.0 0.724 139.3 17.0-116.3 -54.3 -10.3 8.5 0.9 95 95 A S 0 0 105 0, 0.0 -1,-0.3 0, 0.0 -3,-0.0 -0.990 360.0 360.0-130.0 131.0 -9.3 11.7 -0.9 96 96 A G 0 0 90 -2,-0.4 -4,-0.2 -4,-0.2 -5,-0.1 -0.592 360.0 360.0 179.8 360.0 -8.5 12.2 -4.5