==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 25-JUN-08 3DKM . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE HECTD1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.R.WALKER,L.QIU,Y.LI,C.BOUNTRA,M.WOLKSTROM,C.H.ARROWSMITH, . 79 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4911.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 55.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 26.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1264 A G 0 0 135 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 123.8 35.5 -2.0 45.0 2 1265 A R - 0 0 133 1,-0.0 3,-0.1 0, 0.0 0, 0.0 -0.945 360.0 -90.5-134.5 160.2 32.3 -0.2 44.5 3 1266 A E - 0 0 108 -2,-0.3 5,-0.0 1,-0.1 -1,-0.0 -0.266 60.6 -98.1 -54.4 150.5 28.6 -0.6 44.9 4 1267 A N > - 0 0 95 1,-0.1 4,-2.2 4,-0.0 5,-0.1 -0.151 35.1 -98.2 -75.0 176.7 27.1 -2.0 41.7 5 1268 A L H > S+ 0 0 90 1,-0.2 4,-2.7 2,-0.2 5,-0.1 0.799 123.3 57.8 -70.4 -26.4 25.5 0.3 39.1 6 1269 A Y H > S+ 0 0 119 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.929 107.4 46.8 -64.9 -46.1 22.0 -0.6 40.4 7 1270 A F H > S+ 0 0 88 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.910 112.0 50.6 -61.1 -44.9 23.0 0.6 43.9 8 1271 A Q H X S+ 0 0 65 -4,-2.2 4,-2.9 1,-0.2 5,-0.4 0.956 107.4 54.3 -58.8 -45.6 24.4 3.8 42.4 9 1272 A G H X S+ 0 0 2 -4,-2.7 4,-2.6 1,-0.2 -2,-0.2 0.934 110.3 46.9 -51.1 -50.6 21.2 4.3 40.4 10 1273 A L H < S+ 0 0 119 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.866 116.2 44.8 -59.1 -37.6 19.2 4.0 43.7 11 1274 A K H < S+ 0 0 113 -4,-2.1 -2,-0.2 -3,-0.2 -1,-0.2 0.883 125.5 26.8 -78.9 -34.7 21.6 6.4 45.5 12 1275 A Y H < S+ 0 0 65 -4,-2.9 2,-1.8 -5,-0.2 -2,-0.2 0.640 93.9 87.1-107.1 -20.2 21.9 9.1 42.9 13 1276 A M < + 0 0 4 -4,-2.6 31,-0.5 -5,-0.4 -1,-0.1 -0.611 65.4 124.4 -88.9 79.5 18.7 9.0 40.7 14 1277 A V S > S- 0 0 49 -2,-1.8 3,-2.4 29,-0.1 26,-0.3 -0.901 72.4 -67.9-133.9 156.1 16.8 11.4 42.9 15 1278 A P T 3 S+ 0 0 70 0, 0.0 26,-0.2 0, 0.0 3,-0.1 -0.243 120.6 23.1 -50.8 133.5 14.9 14.7 42.3 16 1279 A G T 3 S+ 0 0 43 24,-3.0 25,-0.1 1,-0.3 2,-0.1 0.224 83.9 142.2 97.7 -16.4 17.4 17.4 41.5 17 1280 A A < - 0 0 0 -3,-2.4 23,-2.8 23,-0.2 2,-0.5 -0.394 47.3-133.4 -63.2 137.0 20.2 15.2 40.3 18 1281 A R E +A 39 0A 58 21,-0.2 56,-2.4 56,-0.1 2,-0.3 -0.818 34.0 174.5 -94.4 134.0 22.1 16.7 37.3 19 1282 A V E -AB 38 73A 0 19,-2.3 19,-2.2 -2,-0.5 2,-0.3 -0.867 26.2-168.1-138.1 158.3 22.7 14.3 34.4 20 1283 A T E - B 0 72A 12 52,-2.7 52,-2.3 -2,-0.3 17,-0.1 -0.821 52.3 -70.5-123.7 176.6 24.1 13.8 31.0 21 1284 A R E - B 0 71A 100 15,-0.5 50,-0.3 -2,-0.3 2,-0.2 -0.325 58.3-165.6 -60.9 157.5 23.7 10.8 28.7 22 1285 A G > - 0 0 18 48,-3.1 3,-1.4 49,-0.1 50,-0.2 -0.513 35.4 -54.9-135.1-162.0 25.7 7.7 29.8 23 1286 A L T 3 S+ 0 0 157 48,-0.3 47,-0.2 1,-0.3 49,-0.1 0.845 125.3 37.8 -55.7 -47.1 26.9 4.4 28.6 24 1287 A D T 3 S+ 0 0 43 45,-2.6 -1,-0.3 47,-0.1 46,-0.3 0.443 80.0 140.1 -93.4 5.7 23.8 2.6 27.5 25 1288 A W < + 0 0 27 -3,-1.4 3,-0.0 44,-0.4 46,-0.0 -0.165 11.7 157.9 -47.1 128.0 22.1 5.6 25.9 26 1289 A K + 0 0 126 1,-0.0 -1,-0.1 0, 0.0 -3,-0.0 0.006 39.4 109.2-136.3 31.5 20.4 4.8 22.6 27 1290 A W > - 0 0 58 1,-0.3 3,-1.7 43,-0.1 4,-0.1 -0.053 69.2-136.9-112.7 34.5 17.9 7.7 22.5 28 1291 A R T 3 S- 0 0 203 1,-0.2 3,-0.4 2,-0.1 -1,-0.3 -0.220 70.0 -18.9 54.0-135.0 19.3 9.8 19.6 29 1292 A D T > S+ 0 0 127 1,-0.2 3,-2.2 2,-0.1 -1,-0.2 0.014 90.8 123.3 -98.0 31.4 19.4 13.5 20.3 30 1293 A Q T < + 0 0 57 -3,-1.7 -1,-0.2 1,-0.3 27,-0.2 0.716 60.4 75.2 -69.0 -16.3 16.9 13.6 23.1 31 1294 A D T 3 S- 0 0 4 -3,-0.4 24,-0.4 1,-0.1 -1,-0.3 0.559 100.6-137.2 -71.9 -9.5 19.5 15.3 25.4 32 1295 A G S < S+ 0 0 44 -3,-2.2 -1,-0.1 4,-0.1 -2,-0.1 0.092 71.1 31.2 88.8 -23.8 18.7 18.3 23.3 33 1296 A S S > S- 0 0 60 -2,-0.2 3,-2.3 0, 0.0 2,-0.1 -0.941 103.9 -74.9-154.1 157.7 22.1 19.8 22.6 34 1297 A P T 3 S+ 0 0 126 0, 0.0 3,-0.1 0, 0.0 -5,-0.0 -0.427 122.1 1.2 -61.1 132.3 25.6 18.1 22.3 35 1298 A Q T 3 S+ 0 0 163 1,-0.2 -3,-0.0 -2,-0.1 0, 0.0 0.717 100.4 177.6 61.2 23.1 26.8 17.1 25.7 36 1299 A G < - 0 0 4 -3,-2.3 -15,-0.5 1,-0.1 2,-0.3 -0.160 17.7-141.7 -61.0 150.7 23.5 18.5 27.0 37 1300 A E + 0 0 62 -17,-0.1 17,-3.0 -3,-0.1 18,-0.4 -0.742 19.2 178.3-113.8 162.3 22.5 18.3 30.7 38 1301 A G E -AC 19 53A 0 -19,-2.2 -19,-2.3 15,-0.3 2,-0.4 -0.887 24.1-114.0-151.9 176.2 19.3 17.7 32.5 39 1302 A T E -AC 18 52A 40 13,-2.5 13,-2.5 -2,-0.3 2,-0.3 -0.983 24.2-123.8-124.9 135.2 17.6 17.3 35.9 40 1303 A V E - C 0 51A 1 -23,-2.8 -24,-3.0 -2,-0.4 11,-0.3 -0.588 25.6-172.6 -72.4 140.7 16.0 14.2 37.4 41 1304 A T + 0 0 75 9,-2.2 2,-0.2 -2,-0.3 10,-0.1 0.363 56.2 8.1-119.0 1.1 12.4 15.1 38.3 42 1305 A G S S- 0 0 18 8,-0.6 2,-0.2 -28,-0.1 3,-0.1 -0.770 83.5 -70.7-158.3-165.7 11.1 12.0 40.2 43 1306 A E - 0 0 126 -2,-0.2 7,-0.3 -29,-0.1 -29,-0.1 -0.650 59.8 -79.5-101.6 163.5 12.0 8.7 41.8 44 1307 A L - 0 0 48 -31,-0.5 2,-0.4 -2,-0.2 5,-0.2 -0.334 43.6-171.1 -59.1 141.7 12.9 5.4 40.0 45 1308 A H B > S-D 48 0A 84 3,-2.4 3,-1.9 -3,-0.1 20,-0.1 -0.944 73.0 -21.2-140.5 114.1 9.9 3.5 38.7 46 1309 A N T 3 S- 0 0 157 -2,-0.4 3,-0.1 1,-0.3 18,-0.1 0.844 127.3 -54.9 52.0 32.0 10.5 -0.0 37.3 47 1310 A G T 3 S+ 0 0 20 1,-0.3 16,-3.1 18,-0.1 18,-2.3 0.577 116.5 113.1 82.8 6.8 14.2 1.0 36.9 48 1311 A W E < -DE 45 62A 64 -3,-1.9 -3,-2.4 14,-0.3 2,-0.4 -0.838 48.6-158.0-108.4 153.9 13.4 4.1 34.8 49 1312 A I E - E 0 61A 0 12,-2.6 12,-2.5 -2,-0.3 2,-0.4 -0.982 14.9-126.2-134.8 139.3 14.0 7.7 35.8 50 1313 A D E - E 0 60A 49 -2,-0.4 -9,-2.2 -7,-0.3 -8,-0.6 -0.716 27.9-175.9 -88.9 139.1 12.4 10.9 34.5 51 1314 A V E -CE 40 59A 1 8,-2.9 8,-2.3 -2,-0.4 2,-0.6 -0.981 19.8-154.7-133.5 138.4 14.6 13.8 33.3 52 1315 A T E -CE 39 58A 52 -13,-2.5 -13,-2.5 -2,-0.4 6,-0.2 -0.980 26.8-140.3-108.1 119.7 13.8 17.2 32.1 53 1316 A W E > -C 38 0A 4 4,-3.1 3,-2.0 -2,-0.6 -15,-0.3 -0.439 15.9-123.0 -79.5 151.1 16.6 18.4 29.8 54 1317 A D T 3 S+ 0 0 101 -17,-3.0 -16,-0.1 1,-0.3 -1,-0.1 0.821 115.2 62.9 -59.7 -30.7 17.9 22.0 29.9 55 1318 A A T 3 S- 0 0 64 -18,-0.4 -1,-0.3 -24,-0.4 -23,-0.1 0.661 125.1-105.8 -69.3 -15.9 17.1 22.1 26.2 56 1319 A G S < S+ 0 0 54 -3,-2.0 2,-0.2 1,-0.3 -2,-0.1 0.211 76.5 123.5 119.7 -13.0 13.4 21.6 27.4 57 1320 A G - 0 0 40 -27,-0.2 -4,-3.1 -5,-0.1 2,-0.4 -0.564 42.7-152.7 -79.4 148.7 12.3 18.0 26.6 58 1321 A S E +E 52 0A 85 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.976 32.6 133.6-118.0 132.5 11.0 15.6 29.3 59 1322 A N E -E 51 0A 76 -8,-2.3 -8,-2.9 -2,-0.4 2,-0.3 -0.859 47.2 -97.6-159.1-173.9 11.3 11.8 29.0 60 1323 A S E -E 50 0A 34 -2,-0.3 2,-0.3 -10,-0.2 -10,-0.2 -0.934 29.4-169.0-123.8 145.2 12.3 8.7 30.9 61 1324 A Y E -E 49 0A 1 -12,-2.5 -12,-2.6 -2,-0.3 2,-0.3 -0.920 27.7-102.2-134.1 153.5 15.7 6.8 30.8 62 1325 A R E +E 48 0A 10 -2,-0.3 8,-3.3 -14,-0.2 9,-0.4 -0.592 37.7 161.4 -80.8 131.5 16.9 3.4 32.1 63 1326 A M B S-F 69 0B 19 -16,-3.1 6,-0.2 -2,-0.3 -16,-0.1 -0.435 93.6 -13.9-139.7 63.7 18.9 3.3 35.3 64 1327 A G S > S+ 0 0 15 4,-2.8 3,-2.3 1,-0.6 -16,-0.2 -0.211 105.5 118.9 131.9 -39.1 18.5 -0.4 36.1 65 1328 A A G > S+ 0 0 9 -18,-2.3 3,-2.4 1,-0.3 -1,-0.6 -0.327 91.5 2.4 -57.5 141.3 15.6 -1.2 33.7 66 1329 A E G 3 S- 0 0 129 1,-0.3 -1,-0.3 -3,-0.1 3,-0.1 0.567 125.7 -76.3 55.8 13.0 16.6 -3.8 31.2 67 1330 A G G < S+ 0 0 29 -3,-2.3 2,-0.3 1,-0.3 -1,-0.3 0.702 103.0 128.1 70.0 24.3 19.9 -3.9 33.0 68 1331 A K < - 0 0 89 -3,-2.4 -4,-2.8 -21,-0.1 2,-0.5 -0.820 50.0-157.2-119.3 150.8 20.9 -0.7 31.3 69 1332 A F B +F 63 0B 19 -2,-0.3 -45,-2.6 -6,-0.2 -44,-0.4 -0.937 14.7 173.5-130.6 103.0 22.2 2.7 32.6 70 1333 A D + 0 0 0 -8,-3.3 -48,-3.1 -2,-0.5 2,-0.3 0.505 57.9 57.7 -91.2 -9.5 21.5 5.4 30.1 71 1334 A L E -B 21 0A 9 -9,-0.4 2,-0.3 -50,-0.3 -48,-0.3 -0.819 55.1-162.1-123.4 161.4 22.7 8.4 32.2 72 1335 A K E -B 20 0A 146 -52,-2.3 -52,-2.7 -2,-0.3 2,-0.1 -0.964 39.1 -96.7-134.9 147.1 25.8 9.7 34.0 73 1336 A L E -B 19 0A 44 -2,-0.3 -54,-0.3 -54,-0.2 3,-0.1 -0.476 51.7-107.5 -61.3 141.6 26.0 12.4 36.7 74 1337 A A > - 0 0 4 -56,-2.4 3,-1.9 -36,-0.2 -56,-0.1 -0.259 37.5 -89.4 -71.1 157.0 26.9 15.8 35.1 75 1338 A P T 3 S+ 0 0 100 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.366 115.6 22.8 -64.4 137.8 30.3 17.4 35.4 76 1339 A G T 3 S+ 0 0 92 1,-0.2 2,-0.7 -3,-0.1 -2,-0.1 0.428 93.9 112.9 85.3 -3.0 30.4 19.6 38.5 77 1340 A Y < + 0 0 63 -3,-1.9 -1,-0.2 -59,-0.1 -60,-0.0 -0.923 34.2 159.2-103.1 111.8 27.5 17.8 40.2 78 1341 A D 0 0 92 -2,-0.7 0, 0.0 -3,-0.1 0, 0.0 -0.816 360.0 360.0-135.5 92.9 28.9 16.0 43.3 79 1342 A P 0 0 101 0, 0.0 -2,-0.0 0, 0.0 -67,-0.0 -0.399 360.0 360.0 -83.6 360.0 26.3 15.2 45.9