==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 20-APR-06 2DLM . COMPND 2 MOLECULE: VINEXIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,K.IZUMI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5726.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 32.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 109 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 61.0 10.7 -21.2 -12.6 2 2 A S + 0 0 139 1,-0.2 2,-0.4 3,-0.0 4,-0.1 0.905 360.0 127.0 65.2 42.7 8.8 -18.1 -11.5 3 3 A S + 0 0 103 2,-0.1 2,-0.3 3,-0.0 -1,-0.2 -0.968 42.7 42.7-136.7 119.3 5.7 -20.1 -10.5 4 4 A G S S- 0 0 74 -2,-0.4 2,-0.3 -3,-0.1 0, 0.0 -0.812 99.1 -32.2 158.0-112.7 4.1 -19.9 -7.1 5 5 A S - 0 0 123 -2,-0.3 3,-0.1 1,-0.1 -2,-0.1 -0.841 36.1-172.7-151.9 109.0 3.3 -16.8 -5.0 6 6 A S - 0 0 131 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.984 59.3 -78.3 -63.5 -60.4 5.3 -13.6 -4.9 7 7 A G - 0 0 63 26,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.857 59.6 -43.4-173.2-151.7 3.5 -11.9 -2.0 8 8 A K - 0 0 143 -2,-0.2 26,-0.5 26,-0.2 2,-0.3 -0.856 48.0-125.8-107.7 140.2 0.3 -10.0 -1.1 9 9 A A - 0 0 43 -2,-0.4 53,-0.5 24,-0.1 2,-0.4 -0.606 23.5-164.0 -84.3 141.5 -1.2 -7.1 -3.1 10 10 A A E -A 32 0A 5 22,-0.8 22,-1.1 -2,-0.3 2,-0.5 -0.990 10.7-142.2-130.1 133.9 -1.8 -3.8 -1.4 11 11 A R E -AB 31 60A 144 49,-0.7 49,-0.8 -2,-0.4 2,-0.2 -0.811 28.5-112.7 -97.3 129.4 -4.0 -0.9 -2.6 12 12 A L E - B 0 59A 1 18,-1.3 17,-0.9 -2,-0.5 47,-0.2 -0.390 16.5-141.6 -60.9 123.9 -2.8 2.7 -2.1 13 13 A K S S- 0 0 96 45,-1.4 2,-0.3 -2,-0.2 -1,-0.2 0.849 78.4 -18.7 -54.6 -35.9 -5.1 4.4 0.4 14 14 A F S S- 0 0 116 44,-0.5 2,-0.5 13,-0.1 15,-0.1 -0.959 94.5 -54.7-161.3 174.3 -4.7 7.5 -1.7 15 15 A D - 0 0 88 -2,-0.3 2,-0.3 13,-0.1 12,-0.2 -0.452 56.2-157.0 -63.3 113.1 -2.7 9.3 -4.3 16 16 A F B -C 26 0B 16 10,-1.8 10,-0.8 -2,-0.5 2,-0.5 -0.743 6.0-155.0 -96.6 142.0 0.9 9.4 -3.0 17 17 A Q - 0 0 155 -2,-0.3 2,-0.5 8,-0.2 8,-0.1 -0.934 9.0-145.9-121.0 109.5 3.5 11.9 -4.1 18 18 A A - 0 0 24 -2,-0.5 7,-0.1 1,-0.2 36,-0.0 -0.607 14.8-177.0 -75.9 120.0 7.2 11.0 -3.9 19 19 A Q + 0 0 176 -2,-0.5 -1,-0.2 5,-0.1 6,-0.0 0.810 66.9 61.0 -84.9 -33.4 9.3 14.1 -3.0 20 20 A S S S- 0 0 53 1,-0.1 -2,-0.0 4,-0.1 0, 0.0 -0.577 84.3-124.1 -94.9 158.3 12.6 12.2 -3.2 21 21 A P S S+ 0 0 123 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.771 111.1 55.4 -69.8 -27.0 14.1 10.4 -6.2 22 22 A K S S+ 0 0 141 30,-0.1 31,-1.3 2,-0.1 -4,-0.0 0.884 96.7 77.1 -73.6 -40.1 14.4 7.2 -4.2 23 23 A E B S-d 53 0C 31 29,-0.2 2,-0.4 1,-0.1 31,-0.2 0.022 82.0-119.5 -62.0 176.0 10.7 7.1 -3.2 24 24 A L - 0 0 4 29,-1.1 2,-0.6 28,-0.1 -5,-0.1 -0.972 11.2-133.8-126.6 139.0 8.0 6.0 -5.7 25 25 A T + 0 0 84 -2,-0.4 2,-0.3 -8,-0.1 -8,-0.2 -0.802 32.2 169.4 -94.4 122.5 5.0 8.0 -7.1 26 26 A L B -C 16 0B 17 -10,-0.8 -10,-1.8 -2,-0.6 2,-0.3 -0.951 25.2-131.9-132.3 152.1 1.7 6.2 -7.0 27 27 A Q - 0 0 136 -2,-0.3 -15,-0.3 -12,-0.2 3,-0.1 -0.714 43.4 -80.3-102.9 153.9 -1.9 7.2 -7.6 28 28 A K S S+ 0 0 101 -2,-0.3 -13,-0.1 1,-0.2 -15,-0.1 -0.290 117.3 29.5 -52.9 118.3 -5.0 6.4 -5.5 29 29 A G S S+ 0 0 40 -17,-0.9 2,-0.3 1,-0.2 -1,-0.2 0.886 86.6 139.1 95.3 51.8 -6.0 2.8 -6.4 30 30 A D - 0 0 56 -3,-0.1 -18,-1.3 -16,-0.1 2,-0.5 -0.896 44.7-133.4-126.7 156.2 -2.7 1.2 -7.4 31 31 A I E +A 11 0A 77 -2,-0.3 2,-0.3 -20,-0.2 -20,-0.2 -0.941 26.3 175.2-114.2 124.6 -1.2 -2.3 -6.9 32 32 A V E -A 10 0A 4 -22,-1.1 -22,-0.8 -2,-0.5 2,-0.5 -0.931 24.7-131.1-127.7 151.3 2.4 -2.7 -5.8 33 33 A Y E -E 46 0C 145 13,-0.6 13,-1.1 -2,-0.3 2,-0.7 -0.884 15.7-143.0-105.6 127.5 4.5 -5.7 -4.8 34 34 A I E +E 45 0C 61 -2,-0.5 11,-0.3 -26,-0.5 -26,-0.2 -0.789 19.4 177.2 -92.1 117.0 6.6 -5.6 -1.7 35 35 A H E - 0 0 147 9,-1.0 2,-0.3 -2,-0.7 -1,-0.2 0.957 65.5 -12.0 -80.5 -58.1 10.0 -7.4 -2.0 36 36 A K E S- 0 0 104 8,-0.2 8,-2.3 0, 0.0 2,-0.5 -0.922 73.0 -96.5-141.6 166.0 11.5 -6.8 1.4 37 37 A E E +E 43 0C 137 -2,-0.3 6,-0.2 6,-0.2 3,-0.1 -0.739 32.1 178.0 -89.5 127.6 10.9 -4.6 4.5 38 38 A V E - 0 0 58 4,-0.7 2,-0.2 -2,-0.5 5,-0.2 0.930 61.7 -11.8 -89.4 -67.3 13.0 -1.4 4.7 39 39 A D E > S-E 42 0C 94 3,-1.3 3,-0.9 1,-0.0 -1,-0.3 -0.795 73.7 -93.1-131.2 173.5 11.9 0.4 7.9 40 40 A K T 3 S+ 0 0 176 1,-0.3 -1,-0.0 -2,-0.2 -2,-0.0 0.842 132.6 22.1 -55.6 -34.6 9.2 0.1 10.5 41 41 A N T 3 S+ 0 0 83 15,-0.0 15,-2.6 14,-0.0 16,-0.6 0.177 121.3 73.3-117.6 13.7 7.2 2.7 8.5 42 42 A W E < -EF 39 55C 84 -3,-0.9 -3,-1.3 13,-0.3 -4,-0.7 -0.949 55.0-175.0-130.4 150.4 8.9 2.0 5.2 43 43 A L E -EF 37 54C 31 11,-2.3 11,-2.3 -2,-0.3 2,-0.3 -0.982 21.2-123.3-143.4 153.6 8.8 -0.8 2.6 44 44 A E E + F 0 53C 62 -8,-2.3 -9,-1.0 -2,-0.3 2,-0.3 -0.740 34.1 162.9 -99.1 145.9 10.5 -1.8 -0.6 45 45 A G E -EF 34 52C 3 7,-2.1 7,-1.9 -2,-0.3 2,-0.4 -0.985 25.8-143.0-160.8 149.7 8.7 -2.5 -3.9 46 46 A E E -EF 33 51C 94 -13,-1.1 -13,-0.6 -2,-0.3 2,-0.4 -0.953 16.1-173.1-120.5 136.0 9.3 -2.7 -7.6 47 47 A H E > - F 0 50C 79 3,-1.8 3,-0.7 -2,-0.4 2,-0.6 -0.963 40.5 -92.4-128.7 145.1 7.0 -1.6 -10.4 48 48 A H T 3 S+ 0 0 191 -2,-0.4 3,-0.1 1,-0.3 -2,-0.0 -0.351 116.4 3.0 -56.1 102.3 7.1 -2.0 -14.2 49 49 A G T 3 S+ 0 0 75 -2,-0.6 2,-0.4 0, 0.0 -1,-0.3 -0.202 131.3 54.7 113.3 -41.7 9.0 1.1 -15.2 50 50 A R E < - F 0 47C 147 -3,-0.7 -3,-1.8 2,-0.0 2,-0.4 -0.992 59.8-179.2-131.4 132.9 9.6 2.6 -11.8 51 51 A L E + F 0 46C 127 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.987 30.5 87.1-132.6 141.1 11.4 1.0 -8.8 52 52 A G E - F 0 45C 8 -7,-1.9 -7,-2.1 -2,-0.4 2,-0.3 -0.882 65.7 -54.2 174.1-140.7 12.1 2.3 -5.3 53 53 A I E -dF 23 44C 24 -31,-1.3 -29,-1.1 -2,-0.3 -9,-0.2 -0.868 35.9-169.8-131.2 164.8 10.5 2.5 -1.8 54 54 A F E - F 0 43C 2 -11,-2.3 -11,-2.3 -2,-0.3 2,-0.1 -0.988 33.1 -88.1-152.9 157.7 7.3 3.9 -0.3 55 55 A P E - F 0 42C 13 0, 0.0 3,-0.4 0, 0.0 -13,-0.3 -0.431 23.0-142.8 -69.8 138.2 5.8 4.6 3.1 56 56 A A S S+ 0 0 28 -15,-2.6 3,-0.4 1,-0.2 -14,-0.2 0.549 98.3 66.9 -76.8 -7.2 3.9 1.7 4.8 57 57 A N S S+ 0 0 99 -16,-0.6 -1,-0.2 1,-0.2 -15,-0.1 0.839 95.7 52.0 -80.9 -35.8 1.4 4.3 6.1 58 58 A Y S S+ 0 0 97 -3,-0.4 -45,-1.4 -45,-0.1 -44,-0.5 0.272 110.5 62.4 -83.8 12.0 0.0 5.1 2.6 59 59 A V E -B 12 0A 18 -3,-0.4 2,-0.4 -47,-0.2 -47,-0.2 -1.000 60.8-175.0-141.1 139.7 -0.5 1.4 2.1 60 60 A E E -B 11 0A 118 -49,-0.8 2,-1.0 -2,-0.3 -49,-0.7 -0.996 33.6-112.1-137.0 140.4 -2.6 -1.2 3.9 61 61 A V - 0 0 82 -2,-0.4 -51,-0.1 -51,-0.2 2,-0.1 -0.576 40.4-158.9 -73.1 102.1 -3.0 -5.0 3.4 62 62 A L - 0 0 84 -2,-1.0 2,-0.3 -53,-0.5 -53,-0.1 -0.315 2.4-140.1 -78.1 164.5 -6.4 -5.5 2.0 63 63 A S - 0 0 112 -2,-0.1 -1,-0.0 3,-0.0 0, 0.0 -0.893 6.4-133.8-126.6 156.5 -8.4 -8.8 2.2 64 64 A G > - 0 0 40 -2,-0.3 3,-0.8 1,-0.1 0, 0.0 -0.732 24.3-117.0-110.1 159.5 -10.6 -10.7 -0.2 65 65 A P T 3 S+ 0 0 136 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.475 81.2 115.9 -69.8 -0.8 -14.0 -12.3 0.2 66 66 A S T 3 S+ 0 0 123 1,-0.1 2,-0.3 2,-0.0 -3,-0.0 0.844 88.6 8.0 -34.6 -49.3 -12.3 -15.6 -0.6 67 67 A S < 0 0 101 -3,-0.8 -1,-0.1 0, 0.0 -3,-0.0 -0.999 360.0 360.0-141.3 141.7 -13.2 -16.7 2.9 68 68 A G 0 0 127 -2,-0.3 -2,-0.0 -3,-0.1 0, 0.0 -0.583 360.0 360.0 -77.6 360.0 -15.3 -15.3 5.6