==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 20-APR-06 2DLO . COMPND 2 MOLECULE: THYROID RECEPTOR-INTERACTING PROTEIN 6; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.R.QIN,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6299.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 44.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 13.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 118.3 -25.7 0.9 15.6 2 2 A S - 0 0 129 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.781 360.0-172.1-101.3 143.0 -25.7 -2.2 13.4 3 3 A S + 0 0 126 -2,-0.3 2,-0.2 2,-0.0 0, 0.0 -0.956 24.5 128.4-138.4 117.3 -22.7 -3.2 11.3 4 4 A G + 0 0 74 -2,-0.4 2,-0.2 2,-0.0 -2,-0.0 -0.818 9.2 150.5-170.7 127.1 -22.7 -6.0 8.7 5 5 A S - 0 0 121 -2,-0.2 2,-0.0 2,-0.0 -2,-0.0 -0.757 25.7-149.0-164.3 111.3 -21.8 -6.4 5.1 6 6 A S - 0 0 116 -2,-0.2 2,-0.6 1,-0.0 -2,-0.0 -0.278 17.0-127.3 -76.9 165.7 -20.5 -9.6 3.3 7 7 A G - 0 0 70 2,-0.0 2,-2.3 -2,-0.0 -1,-0.0 -0.848 9.0-153.5-121.7 96.8 -18.1 -9.6 0.4 8 8 A E + 0 0 188 -2,-0.6 2,-0.1 1,-0.1 -2,-0.0 -0.426 57.9 113.0 -67.6 80.7 -19.3 -11.5 -2.7 9 9 A G + 0 0 20 -2,-2.3 -1,-0.1 14,-0.1 -2,-0.0 -0.532 20.7 113.9-156.4 83.1 -15.8 -12.2 -4.0 10 10 A C + 0 0 120 -2,-0.1 -2,-0.1 2,-0.0 -1,-0.0 0.725 59.6 73.8-115.7 -50.6 -14.6 -15.8 -4.1 11 11 A Y - 0 0 177 2,-0.0 2,-0.4 1,-0.0 0, 0.0 -0.220 63.8-156.4 -65.9 158.3 -14.3 -16.8 -7.7 12 12 A V - 0 0 95 -3,-0.0 2,-0.5 12,-0.0 4,-0.1 -0.992 12.4-169.0-143.4 132.3 -11.4 -15.5 -9.8 13 13 A A S S- 0 0 55 -2,-0.4 3,-0.1 3,-0.1 -2,-0.0 -0.866 71.3 -60.0-124.8 97.8 -10.9 -15.1 -13.6 14 14 A T S S+ 0 0 160 -2,-0.5 2,-0.3 1,-0.1 -1,-0.0 0.819 106.7 121.2 32.0 46.7 -7.4 -14.3 -14.7 15 15 A L - 0 0 36 2,-0.0 2,-0.2 14,-0.0 -1,-0.1 -0.993 60.7-126.5-138.7 144.9 -7.7 -11.2 -12.5 16 16 A E - 0 0 87 -2,-0.3 9,-2.7 9,-0.1 2,-0.5 -0.561 21.8-126.9 -89.0 153.5 -5.7 -9.8 -9.5 17 17 A K B -A 24 0A 83 7,-0.2 19,-0.3 -2,-0.2 5,-0.0 -0.880 28.1-109.1-104.8 127.8 -7.3 -8.8 -6.2 18 18 A C > - 0 0 2 5,-3.3 4,-1.2 -2,-0.5 5,-0.3 -0.284 18.2-148.7 -54.1 125.9 -6.6 -5.4 -4.8 19 19 A A T 4 S+ 0 0 48 17,-1.3 -1,-0.2 1,-0.2 18,-0.1 0.137 92.2 53.3 -84.2 21.3 -4.3 -5.7 -1.7 20 20 A T T 4 S+ 0 0 75 3,-0.1 -1,-0.2 22,-0.0 17,-0.1 0.715 125.6 11.3-117.5 -56.6 -6.1 -2.7 -0.2 21 21 A C T 4 S- 0 0 49 2,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.493 98.0-120.5-103.2 -8.3 -9.8 -3.2 -0.2 22 22 A S < + 0 0 95 -4,-1.2 -3,-0.1 1,-0.2 15,-0.0 0.953 64.0 139.4 67.3 51.5 -9.6 -6.9 -1.1 23 23 A Q - 0 0 113 -5,-0.3 -5,-3.3 -7,-0.0 2,-0.5 -0.957 59.9-102.4-129.6 147.2 -11.6 -6.6 -4.3 24 24 A P B -A 17 0A 36 0, 0.0 2,-0.3 0, 0.0 -7,-0.2 -0.526 37.8-130.5 -69.8 117.2 -11.2 -8.2 -7.8 25 25 A I + 0 0 4 -9,-2.7 -9,-0.1 -2,-0.5 4,-0.1 -0.512 45.5 147.7 -71.6 130.2 -9.7 -5.7 -10.2 26 26 A L + 0 0 136 -2,-0.3 -1,-0.2 2,-0.2 3,-0.1 0.591 66.6 49.5-129.3 -41.0 -11.7 -5.5 -13.5 27 27 A D S S- 0 0 168 1,-0.3 2,-0.3 0, 0.0 -2,-0.1 0.999 125.0 -16.5 -66.5 -70.2 -11.3 -1.9 -14.7 28 28 A R - 0 0 155 2,-0.0 2,-0.6 0, 0.0 -1,-0.3 -0.999 56.7-142.1-142.9 142.8 -7.6 -1.3 -14.4 29 29 A I - 0 0 71 -2,-0.3 2,-0.7 -3,-0.1 9,-0.2 -0.917 12.4-161.9-109.8 117.9 -4.7 -3.2 -12.6 30 30 A L E -B 37 0B 32 7,-2.3 7,-2.7 -2,-0.6 2,-0.5 -0.867 11.6-145.5-102.1 112.7 -2.0 -1.1 -11.0 31 31 A R E +B 36 0B 215 -2,-0.7 2,-0.3 5,-0.2 5,-0.2 -0.639 33.1 154.6 -79.2 123.1 1.2 -3.0 -10.3 32 32 A A E > -B 35 0B 12 3,-2.5 3,-1.0 -2,-0.5 -2,-0.0 -0.966 62.1 -0.0-153.1 132.8 3.0 -1.8 -7.2 33 33 A M T 3 S- 0 0 100 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 0.777 123.9 -66.7 61.6 26.2 5.3 -3.4 -4.7 34 34 A G T 3 S+ 0 0 82 1,-0.3 -1,-0.3 0, 0.0 2,-0.1 -0.031 121.8 91.6 86.6 -33.4 5.1 -6.6 -6.7 35 35 A K E < S-B 32 0B 126 -3,-1.0 -3,-2.5 -4,-0.1 2,-0.5 -0.260 81.0-106.5 -86.6 177.4 1.4 -7.0 -5.8 36 36 A A E +B 31 0B 0 -19,-0.3 -17,-1.3 -5,-0.2 2,-0.3 -0.923 40.7 167.1-112.2 130.5 -1.6 -5.7 -7.6 37 37 A Y E -B 30 0B 34 -7,-2.7 -7,-2.3 -2,-0.5 -19,-0.1 -0.914 38.8 -88.6-137.0 163.2 -3.7 -2.7 -6.4 38 38 A H > - 0 0 37 -2,-0.3 4,-1.6 -9,-0.2 -9,-0.1 -0.363 34.1-119.6 -71.6 150.3 -6.4 -0.4 -7.7 39 39 A P T 4 S+ 0 0 31 0, 0.0 13,-0.1 0, 0.0 -1,-0.1 0.418 115.4 34.1 -69.7 3.7 -5.4 2.9 -9.5 40 40 A G T 4 S+ 0 0 58 11,-0.1 12,-0.1 -10,-0.0 11,-0.1 0.569 108.3 61.6-128.8 -26.2 -7.3 4.7 -6.8 41 41 A C T 4 S+ 0 0 37 9,-0.1 2,-0.4 2,-0.0 -4,-0.0 0.905 79.2 94.5 -70.9 -43.0 -6.7 2.7 -3.6 42 42 A F < + 0 0 6 -4,-1.6 9,-1.1 8,-0.1 2,-0.3 -0.335 58.6 135.8 -55.2 107.9 -2.9 3.1 -3.7 43 43 A T B -C 50 0C 53 -2,-0.4 7,-0.2 7,-0.2 21,-0.1 -0.979 55.9 -85.2-153.3 162.0 -2.4 6.1 -1.4 44 44 A C - 0 0 2 5,-1.8 21,-0.2 -2,-0.3 20,-0.1 -0.144 24.5-140.7 -64.9 164.6 -0.1 7.3 1.4 45 45 A V S S+ 0 0 51 19,-1.1 20,-0.1 18,-0.2 -1,-0.1 0.684 96.3 35.9 -99.3 -24.8 -0.9 6.5 5.1 46 46 A V S S+ 0 0 75 18,-0.3 19,-0.1 17,-0.1 18,-0.0 0.920 136.1 15.4 -90.8 -70.6 0.1 9.9 6.5 47 47 A C S S- 0 0 57 2,-0.1 -2,-0.1 19,-0.0 18,-0.1 0.746 93.8-138.8 -77.1 -24.5 -1.0 12.5 4.0 48 48 A H + 0 0 128 1,-0.2 2,-0.3 -5,-0.0 -3,-0.1 0.965 43.0 159.2 64.2 54.4 -3.2 10.0 2.2 49 49 A R - 0 0 84 1,-0.0 -5,-1.8 2,-0.0 2,-0.5 -0.816 49.6 -96.5-110.4 150.1 -2.3 11.2 -1.3 50 50 A G B -C 43 0C 37 -2,-0.3 -7,-0.2 -7,-0.2 -8,-0.1 -0.493 31.9-174.0 -67.3 116.6 -2.6 9.3 -4.6 51 51 A L > + 0 0 4 -9,-1.1 2,-1.8 -2,-0.5 3,-1.1 -0.029 38.9 131.6-100.0 29.5 0.8 7.8 -5.4 52 52 A D T 3 S+ 0 0 91 1,-0.3 -2,-0.1 -10,-0.2 -1,-0.1 -0.569 85.0 8.4 -83.9 78.4 -0.4 6.6 -8.8 53 53 A G T 3 S+ 0 0 77 -2,-1.8 -1,-0.3 1,-0.4 -2,-0.1 0.564 112.4 91.2 124.5 21.4 2.6 7.8 -10.9 54 54 A I S < S- 0 0 62 -3,-1.1 -1,-0.4 0, 0.0 2,-0.0 -0.979 75.8 -96.2-143.8 155.2 5.1 9.0 -8.3 55 55 A P + 0 0 92 0, 0.0 12,-0.7 0, 0.0 2,-0.3 -0.340 47.2 161.9 -69.8 149.7 8.0 7.5 -6.3 56 56 A F E -D 66 0D 50 10,-0.2 2,-0.3 11,-0.1 10,-0.2 -0.942 25.8-136.8-157.2 175.4 7.5 6.2 -2.7 57 57 A T E -D 65 0D 41 8,-1.3 8,-2.8 -2,-0.3 2,-0.2 -0.999 11.0-158.4-146.4 142.5 9.0 4.1 0.0 58 58 A V - 0 0 47 -2,-0.3 2,-0.2 6,-0.2 6,-0.1 -0.505 6.9-156.8-110.7-179.1 7.7 1.5 2.4 59 59 A D > - 0 0 72 -2,-0.2 3,-2.3 1,-0.0 5,-0.1 -0.843 43.7 -76.9-146.7-177.9 8.8 0.0 5.8 60 60 A A T 3 S+ 0 0 100 1,-0.3 -1,-0.0 -2,-0.2 -2,-0.0 0.858 128.0 58.7 -54.0 -37.7 8.5 -3.0 8.1 61 61 A T T 3 S- 0 0 77 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.633 109.3-129.0 -67.9 -12.8 5.1 -1.7 9.1 62 62 A S < + 0 0 95 -3,-2.3 2,-0.7 1,-0.2 -2,-0.1 0.870 59.2 144.7 65.5 37.4 4.1 -1.9 5.4 63 63 A Q - 0 0 83 2,-0.0 -18,-0.2 -18,-0.0 -1,-0.2 -0.743 49.9-135.7-110.6 83.2 2.8 1.6 5.5 64 64 A I - 0 0 25 -2,-0.7 -19,-1.1 -20,-0.1 2,-0.5 -0.089 25.9-167.6 -39.2 112.1 3.6 3.1 2.1 65 65 A H E -D 57 0D 4 -8,-2.8 -8,-1.3 -21,-0.2 -1,-0.1 -0.942 22.2-118.3-115.2 117.6 5.0 6.6 3.0 66 66 A C E > -D 56 0D 0 -2,-0.5 4,-3.2 -10,-0.2 5,-0.4 -0.178 31.6-109.1 -50.9 138.0 5.4 9.2 0.2 67 67 A I H > S+ 0 0 49 -12,-0.7 4,-2.8 1,-0.2 5,-0.2 0.860 119.4 52.5 -33.6 -57.4 9.0 10.3 -0.2 68 68 A E H >> S+ 0 0 127 2,-0.2 4,-1.3 1,-0.2 3,-0.5 0.952 115.6 37.6 -45.9 -67.6 8.1 13.7 1.3 69 69 A D H >> S+ 0 0 29 1,-0.3 4,-2.7 2,-0.2 3,-1.4 0.938 115.4 54.1 -51.3 -53.7 6.5 12.3 4.4 70 70 A F H 3X>S+ 0 0 50 -4,-3.2 4,-2.0 1,-0.3 5,-1.0 0.839 110.5 48.0 -50.9 -35.5 9.0 9.5 4.7 71 71 A H H <<5S+ 0 0 93 -4,-2.8 -1,-0.3 -3,-0.5 -2,-0.2 0.696 115.7 44.3 -79.0 -20.2 11.7 12.2 4.6 72 72 A R H <<5S+ 0 0 180 -3,-1.4 -2,-0.2 -4,-1.3 -1,-0.2 0.642 123.6 35.0 -96.0 -19.7 9.9 14.2 7.2 73 73 A K H ><5S+ 0 0 104 -4,-2.7 3,-0.5 -5,-0.2 -3,-0.2 0.871 130.9 26.8 -97.8 -56.0 9.1 11.2 9.4 74 74 A F T 3<5S+ 0 0 64 -4,-2.0 2,-0.9 -5,-0.3 -3,-0.2 0.875 123.8 52.2 -75.8 -39.2 12.2 9.0 9.1 75 75 A A T 3