==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 24-APR-06 2DMV . COMPND 2 MOLECULE: ITCHY HOMOLOG E3 UBIQUITIN PROTEIN LIGASE; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,K.PAAKKONEN,N.TOCHIO,T.TOMIZAWA,S.KOSHIBA,M.INOUE, . 43 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4071.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 37.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 20.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 142 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -36.9 -10.7 -6.2 -14.1 2 2 A S - 0 0 116 3,-0.0 2,-0.7 0, 0.0 3,-0.4 -0.802 360.0-100.8-118.0 160.1 -13.5 -8.2 -12.6 3 3 A S S S+ 0 0 122 -2,-0.3 3,-0.1 1,-0.2 0, 0.0 -0.700 80.2 97.6 -83.3 112.5 -15.1 -8.3 -9.1 4 4 A G S S+ 0 0 71 -2,-0.7 2,-0.3 1,-0.4 -1,-0.2 0.324 77.0 26.2-156.3 -52.7 -13.7 -11.2 -7.1 5 5 A S + 0 0 114 -3,-0.4 -1,-0.4 2,-0.0 2,-0.3 -0.958 52.7 167.4-129.6 147.4 -10.9 -10.3 -4.8 6 6 A S + 0 0 130 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.837 38.3 56.9-162.0 118.8 -9.9 -7.1 -3.0 7 7 A G S S- 0 0 56 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.964 71.1 -69.0 163.1-144.5 -7.5 -6.5 -0.1 8 8 A L - 0 0 53 -2,-0.3 3,-0.1 4,-0.1 -2,-0.1 -0.978 40.8 -97.4-146.8 157.9 -3.8 -6.9 0.7 9 9 A P > - 0 0 61 0, 0.0 3,-1.7 0, 0.0 2,-0.6 -0.144 56.8 -75.1 -69.7 167.9 -1.3 -9.7 1.5 10 10 A P T 3 S+ 0 0 135 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.534 120.7 27.3 -69.8 111.0 -0.3 -10.9 5.0 11 11 A G T 3 S+ 0 0 31 -2,-0.6 16,-1.9 1,-0.4 17,-0.5 0.198 97.2 102.3 123.3 -14.2 2.0 -8.2 6.5 12 12 A W E < -A 26 0A 27 -3,-1.7 -1,-0.4 14,-0.2 14,-0.2 -0.810 54.4-152.0-104.5 143.6 0.8 -5.2 4.6 13 13 A E E -A 25 0A 82 12,-1.5 12,-0.8 -2,-0.4 2,-0.5 -0.622 9.1-131.8-108.3 168.9 -1.4 -2.5 6.0 14 14 A Q E +A 24 0A 130 10,-0.2 2,-0.3 -2,-0.2 10,-0.2 -0.963 37.3 147.7-127.4 116.0 -3.9 -0.1 4.4 15 15 A R E -A 23 0A 101 8,-2.5 8,-3.2 -2,-0.5 2,-0.3 -0.890 30.3-137.6-139.6 169.1 -3.9 3.6 5.2 16 16 A V E -A 22 0A 80 -2,-0.3 6,-0.2 6,-0.2 2,-0.1 -0.956 12.9-134.7-132.2 150.6 -4.6 7.0 3.5 17 17 A D > - 0 0 67 4,-0.8 3,-0.5 -2,-0.3 5,-0.0 -0.292 36.6 -97.4 -93.1-179.1 -2.9 10.4 3.5 18 18 A Q T 3 S+ 0 0 178 1,-0.2 -1,-0.1 2,-0.1 -2,-0.0 0.499 122.5 59.7 -77.3 -3.4 -4.4 13.9 3.9 19 19 A H T 3 S- 0 0 148 2,-0.2 -1,-0.2 0, 0.0 3,-0.1 0.686 116.4-110.0 -95.5 -23.6 -4.4 14.1 0.1 20 20 A G S < S+ 0 0 55 -3,-0.5 2,-0.8 1,-0.2 -2,-0.1 0.542 72.0 136.7 104.2 11.0 -6.7 11.2 -0.5 21 21 A R - 0 0 167 2,-0.0 -4,-0.8 1,-0.0 -1,-0.2 -0.819 51.4-134.0 -96.5 108.1 -4.1 8.8 -2.0 22 22 A V E +A 16 0A 58 -2,-0.8 2,-0.3 -6,-0.2 -6,-0.2 -0.318 30.8 177.6 -60.2 137.0 -4.4 5.3 -0.5 23 23 A Y E -A 15 0A 44 -8,-3.2 -8,-2.5 2,-0.0 11,-0.3 -0.999 21.9-133.6-145.8 143.8 -1.1 3.8 0.5 24 24 A Y E -AB 14 33A 33 9,-2.7 9,-1.8 -2,-0.3 2,-0.5 -0.654 12.4-151.0 -97.0 153.3 0.0 0.5 2.1 25 25 A V E -AB 13 32A 26 -12,-0.8 -12,-1.5 -2,-0.2 2,-0.5 -0.966 7.7-144.5-129.4 117.1 2.5 0.2 5.0 26 26 A D E > -A 12 0A 8 5,-2.0 4,-1.4 -2,-0.5 5,-0.3 -0.668 8.5-169.0 -82.0 124.4 4.7 -2.9 5.4 27 27 A H T 4 S+ 0 0 90 -16,-1.9 -1,-0.1 -2,-0.5 -15,-0.1 0.626 91.9 42.0 -85.2 -15.1 5.3 -3.8 9.1 28 28 A V T 4 S+ 0 0 122 -17,-0.5 -1,-0.2 3,-0.1 -16,-0.1 0.681 128.5 28.1-101.4 -25.5 8.0 -6.3 8.1 29 29 A E T 4 S- 0 0 115 -18,-0.2 -2,-0.2 2,-0.1 -17,-0.1 0.651 93.7-138.6-106.7 -25.0 9.7 -4.2 5.5 30 30 A K < + 0 0 160 -4,-1.4 2,-0.3 1,-0.2 -3,-0.2 0.966 52.4 138.1 63.5 54.9 8.8 -0.8 6.9 31 31 A R - 0 0 98 -5,-0.3 -5,-2.0 2,-0.0 2,-0.5 -0.967 43.9-144.5-132.8 148.3 8.0 0.8 3.5 32 32 A T E +B 25 0A 108 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.948 24.4 164.1-116.7 128.9 5.3 3.2 2.3 33 33 A T E -B 24 0A 24 -9,-1.8 -9,-2.7 -2,-0.5 -2,-0.0 -0.999 37.3-145.8-145.0 139.8 3.7 3.0 -1.2 34 34 A W S S+ 0 0 111 -2,-0.3 2,-0.2 -11,-0.3 -1,-0.1 0.739 91.2 41.6 -73.5 -23.1 0.6 4.4 -2.8 35 35 A D S S- 0 0 117 1,-0.2 -11,-0.3 -11,-0.1 4,-0.1 -0.706 105.9 -67.3-119.5 171.7 0.3 1.3 -4.9 36 36 A R - 0 0 161 -2,-0.2 -1,-0.2 1,-0.1 -2,-0.1 -0.027 46.3-112.2 -53.2 160.5 0.7 -2.4 -4.4 37 37 A P S S+ 0 0 50 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.692 101.2 65.8 -69.8 -19.0 4.2 -3.8 -3.6 38 38 A S S S+ 0 0 109 2,-0.0 -2,-0.1 3,-0.0 0, 0.0 -0.855 81.1 47.7-108.9 141.8 4.1 -5.6 -7.0 39 39 A G S S- 0 0 58 -2,-0.4 2,-0.0 -4,-0.1 -4,-0.0 -0.761 89.8 -22.7 128.9-175.7 4.1 -3.9 -10.4 40 40 A P - 0 0 142 0, 0.0 2,-0.4 0, 0.0 -2,-0.0 -0.339 53.9-148.0 -69.7 149.8 5.9 -1.1 -12.3 41 41 A S - 0 0 123 -2,-0.0 2,-0.5 2,-0.0 -2,-0.0 -0.979 4.5-140.4-125.5 132.6 7.7 1.7 -10.5 42 42 A S 0 0 122 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.773 360.0 360.0 -93.4 129.2 8.1 5.3 -11.6 43 43 A G 0 0 126 -2,-0.5 -1,-0.1 0, 0.0 -2,-0.0 0.619 360.0 360.0 -74.5 360.0 11.4 7.0 -11.0