==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 25-APR-06 2DNC . COMPND 2 MOLECULE: PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.Z.M.RUHUL MOMEN,H.HIROTA,F.HAYASHI,C.KUROSAKI,M.YOSHIDA, . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6557.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 54.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 28.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 139 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-170.9 -10.8 15.9 -21.8 2 2 A S + 0 0 126 2,-0.0 2,-0.1 0, 0.0 0, 0.0 -0.997 360.0 147.7-143.2 135.3 -7.1 16.0 -20.7 3 3 A S - 0 0 119 -2,-0.4 2,-0.3 2,-0.0 95,-0.0 -0.513 17.5-176.9-169.4 91.4 -5.4 14.9 -17.6 4 4 A G + 0 0 75 -2,-0.1 2,-0.3 2,-0.0 -2,-0.0 -0.659 8.0 169.7 -95.3 150.7 -1.8 13.6 -17.7 5 5 A S - 0 0 105 -2,-0.3 2,-0.3 2,-0.1 -2,-0.0 -0.979 25.2-153.4-155.0 159.7 0.1 12.2 -14.7 6 6 A S + 0 0 107 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.753 37.6 138.9-142.8 90.5 3.3 10.4 -13.9 7 7 A G - 0 0 36 -2,-0.3 2,-0.6 76,-0.1 76,-0.2 -0.514 54.5 -93.0-119.6-172.2 3.2 8.4 -10.7 8 8 A I E -A 82 0A 63 74,-2.1 74,-2.2 -2,-0.2 2,-0.4 -0.934 32.9-149.4-112.6 112.6 4.5 5.0 -9.4 9 9 A K E -A 81 0A 126 -2,-0.6 2,-0.7 72,-0.2 72,-0.2 -0.673 10.4-141.2 -82.9 128.9 2.0 2.2 -9.7 10 10 A I E -A 80 0A 21 70,-2.7 69,-2.2 -2,-0.4 70,-0.8 -0.829 20.5-171.4 -94.9 116.0 2.3 -0.5 -7.0 11 11 A L E -A 78 0A 73 -2,-0.7 67,-0.2 67,-0.2 64,-0.1 -0.884 39.1 -89.3-110.0 139.2 1.8 -4.0 -8.4 12 12 A M - 0 0 7 65,-1.4 64,-1.1 -2,-0.4 66,-0.1 -0.219 50.0-137.5 -47.5 114.4 1.5 -7.1 -6.2 13 13 A P - 0 0 38 0, 0.0 2,-1.7 0, 0.0 3,-0.3 -0.311 20.1-106.8 -75.0 160.5 5.1 -8.3 -5.9 14 14 A S + 0 0 88 1,-0.2 -2,-0.1 -2,-0.1 5,-0.0 -0.369 53.3 160.6 -84.7 56.7 6.0 -12.0 -6.1 15 15 A L + 0 0 55 -2,-1.7 -1,-0.2 2,-0.1 37,-0.1 0.897 63.6 54.8 -42.0 -52.3 6.7 -12.2 -2.4 16 16 A S S > S- 0 0 12 -3,-0.3 3,-0.6 1,-0.1 31,-0.0 -0.478 85.5-130.0 -84.8 157.3 6.3 -15.9 -2.7 17 17 A P T 3 S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.783 108.6 19.9 -75.0 -29.1 8.4 -18.1 -5.0 18 18 A T T 3 S+ 0 0 129 0, 0.0 2,-0.4 0, 0.0 -3,-0.0 -0.406 89.9 141.8-138.5 58.2 5.2 -19.8 -6.3 19 19 A M < - 0 0 19 -3,-0.6 56,-0.1 1,-0.1 3,-0.1 -0.860 29.0-176.3-106.2 136.8 2.4 -17.4 -5.4 20 20 A E S S- 0 0 154 -2,-0.4 55,-0.9 1,-0.3 2,-0.3 0.704 73.5 -8.3 -98.1 -28.0 -0.6 -16.8 -7.7 21 21 A E E -D 74 0B 79 53,-0.3 -1,-0.3 24,-0.1 53,-0.3 -0.963 60.6-148.6-160.3 170.1 -2.3 -14.2 -5.5 22 22 A G E -D 73 0B 0 51,-1.0 51,-3.2 -2,-0.3 50,-0.4 -0.624 12.7-129.1-132.5-169.2 -2.1 -12.5 -2.1 23 23 A N - 0 0 30 22,-0.4 22,-2.0 49,-0.2 2,-0.8 -0.839 16.9-135.1-154.7 110.6 -4.3 -11.0 0.6 24 24 A I E -E 44 0C 2 46,-0.4 45,-2.6 -2,-0.3 20,-0.2 -0.554 21.6-175.8 -69.7 107.2 -3.8 -7.5 2.1 25 25 A V E - 0 0 65 18,-3.2 2,-0.3 -2,-0.8 -1,-0.2 0.983 66.1 -21.6 -67.3 -59.9 -4.3 -8.1 5.8 26 26 A K E - 0 0 135 17,-0.3 17,-1.7 42,-0.1 2,-0.3 -0.974 65.4-113.4-156.1 140.2 -3.9 -4.5 6.9 27 27 A W E -E 42 0C 11 -2,-0.3 15,-0.3 15,-0.2 14,-0.1 -0.588 15.5-162.2 -76.8 133.1 -2.3 -1.4 5.4 28 28 A L S S+ 0 0 79 13,-3.6 2,-0.3 -2,-0.3 14,-0.2 0.493 77.3 48.2 -91.2 -6.7 0.7 -0.2 7.4 29 29 A K S S- 0 0 34 12,-0.8 2,-0.3 4,-0.0 6,-0.1 -0.898 74.6-138.6-131.7 160.2 0.4 3.1 5.7 30 30 A K > - 0 0 128 -2,-0.3 3,-1.8 4,-0.1 2,-0.4 -0.751 37.7 -83.0-116.4 164.1 -2.4 5.6 5.0 31 31 A E T 3 S+ 0 0 88 -2,-0.3 31,-0.2 1,-0.3 3,-0.1 -0.533 118.0 22.8 -69.8 120.8 -3.2 7.7 1.9 32 32 A G T 3 S+ 0 0 21 29,-2.4 -1,-0.3 1,-0.5 2,-0.1 0.158 96.2 121.6 108.6 -14.8 -1.1 10.9 2.0 33 33 A E < - 0 0 112 -3,-1.8 28,-3.6 28,-0.2 -1,-0.5 -0.425 66.0-107.0 -79.7 156.1 1.6 9.4 4.2 34 34 A A E -B 60 0A 41 26,-0.3 2,-0.3 -2,-0.1 26,-0.2 -0.315 30.3-152.2 -78.2 164.8 5.2 9.2 3.2 35 35 A V E -B 59 0A 0 24,-1.3 24,-0.8 -2,-0.1 2,-0.4 -0.995 6.0-161.4-142.0 144.4 6.9 6.0 2.2 36 36 A S > - 0 0 52 -2,-0.3 3,-1.8 22,-0.2 19,-0.5 -0.990 34.0-100.7-130.3 135.9 10.5 4.8 2.4 37 37 A A T 3 S+ 0 0 53 -2,-0.4 19,-0.2 1,-0.3 3,-0.1 -0.272 110.8 21.0 -53.5 130.1 12.1 1.9 0.5 38 38 A G T 3 S+ 0 0 55 17,-3.1 -1,-0.3 1,-0.4 18,-0.1 -0.214 95.9 117.9 102.6 -40.3 12.4 -1.1 2.8 39 39 A D S < S- 0 0 73 -3,-1.8 16,-2.8 15,-0.2 -1,-0.4 -0.174 75.7-100.2 -57.8 153.5 9.7 0.1 5.2 40 40 A A E + F 0 54C 39 14,-0.2 14,-0.2 1,-0.2 -1,-0.1 -0.634 38.2 177.1 -81.3 132.8 6.6 -2.1 5.5 41 41 A L E - 0 0 5 12,-3.7 -13,-3.6 1,-0.5 -12,-0.8 0.860 63.5 -22.2 -98.1 -55.7 3.6 -0.9 3.5 42 42 A C E -EF 27 53C 0 11,-0.9 11,-4.2 -15,-0.3 2,-0.7 -0.947 66.8 -97.9-151.8 166.8 1.1 -3.6 4.1 43 43 A E E - F 0 52C 66 -17,-1.7 -18,-3.2 -2,-0.3 2,-0.5 -0.840 33.5-155.8 -96.9 114.9 0.9 -7.2 5.2 44 44 A I E -EF 24 51C 0 7,-1.5 7,-1.8 -2,-0.7 2,-0.4 -0.792 10.5-139.8 -93.2 126.9 0.5 -9.6 2.3 45 45 A E E + F 0 50C 98 -22,-2.0 -22,-0.4 -2,-0.5 2,-0.3 -0.705 28.0 170.0 -88.8 134.5 -1.1 -13.0 3.1 46 46 A T - 0 0 15 3,-0.9 -24,-0.1 -2,-0.4 -27,-0.0 -0.988 45.5-121.0-144.3 150.6 0.4 -16.1 1.5 47 47 A D S S+ 0 0 179 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.896 114.5 57.7 -54.7 -43.2 0.0 -19.8 1.9 48 48 A K S S- 0 0 165 1,-0.2 2,-0.3 -3,-0.1 -1,-0.2 0.959 126.4 -65.0 -51.2 -59.7 3.7 -20.0 2.6 49 49 A A - 0 0 57 2,-0.0 -3,-0.9 0, 0.0 2,-0.9 -0.945 65.7 -53.8-173.8-173.6 3.4 -17.6 5.6 50 50 A V E +F 45 0C 94 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.752 60.2 175.5 -87.3 105.7 2.5 -14.1 6.6 51 51 A V E -F 44 0C 49 -7,-1.8 -7,-1.5 -2,-0.9 2,-0.3 -0.757 21.0-134.9-110.1 157.4 4.7 -11.8 4.6 52 52 A T E -F 43 0C 50 -2,-0.3 2,-0.8 -9,-0.3 -9,-0.3 -0.853 16.9-120.8-113.6 148.7 4.8 -8.0 4.4 53 53 A L E -F 42 0C 8 -11,-4.2 -12,-3.7 -2,-0.3 -11,-0.9 -0.793 30.5-158.4 -91.2 110.9 5.0 -5.8 1.4 54 54 A D E -F 40 0C 92 -2,-0.8 2,-0.3 -14,-0.2 -14,-0.2 -0.608 24.6-103.7 -88.9 149.4 8.1 -3.6 1.7 55 55 A A - 0 0 4 -16,-2.8 -17,-3.1 -19,-0.5 -1,-0.1 -0.538 23.3-165.0 -74.1 133.9 8.4 -0.3 -0.2 56 56 A S S S+ 0 0 103 -2,-0.3 2,-0.3 -19,-0.2 -1,-0.1 0.684 75.8 20.8 -89.8 -22.7 10.7 -0.6 -3.3 57 57 A D S S- 0 0 85 -21,-0.1 2,-0.5 -49,-0.0 -19,-0.1 -0.899 82.8-106.6-140.4 167.4 10.9 3.2 -3.6 58 58 A D + 0 0 93 -2,-0.3 2,-0.3 -22,-0.2 -22,-0.2 -0.878 60.5 111.9-102.5 125.3 10.4 6.3 -1.4 59 59 A G E -B 35 0A 0 -24,-0.8 -24,-1.3 -2,-0.5 2,-0.4 -0.959 64.7 -73.5-171.0-179.2 7.3 8.4 -2.1 60 60 A I E -BC 34 83A 24 23,-3.1 23,-2.2 -2,-0.3 2,-1.7 -0.800 48.2-110.2 -97.0 134.2 4.0 9.6 -0.8 61 61 A L E - C 0 82A 1 -28,-3.6 -29,-2.4 -2,-0.4 21,-0.2 -0.434 37.9-175.6 -63.7 88.9 1.1 7.1 -0.7 62 62 A A E - 0 0 12 -2,-1.7 2,-0.3 19,-1.0 -1,-0.2 0.967 59.0 -37.1 -49.9 -65.7 -0.9 8.8 -3.4 63 63 A K E - C 0 81A 101 18,-1.1 18,-1.1 -3,-0.1 2,-0.5 -0.904 53.4-113.3-152.6 176.8 -3.9 6.5 -3.1 64 64 A I - 0 0 16 -2,-0.3 16,-0.3 16,-0.2 3,-0.2 -0.934 20.9-179.6-126.4 106.6 -4.8 2.9 -2.4 65 65 A V S S+ 0 0 51 -2,-0.5 2,-0.7 1,-0.3 15,-0.2 0.955 82.4 38.0 -66.6 -52.2 -6.4 1.0 -5.2 66 66 A V S S- 0 0 24 13,-1.2 -1,-0.3 11,-0.1 3,-0.1 -0.906 83.1-157.3-107.0 111.2 -6.8 -2.2 -3.2 67 67 A E > - 0 0 113 -2,-0.7 3,-1.1 -3,-0.2 -43,-0.2 -0.339 33.6 -78.8 -81.6 165.7 -7.8 -1.6 0.5 68 68 A E T 3 S+ 0 0 76 1,-0.2 -43,-0.2 -2,-0.1 -1,-0.2 -0.293 111.0 50.4 -64.0 148.2 -7.2 -4.0 3.3 69 69 A G T 3 S+ 0 0 68 -45,-2.6 -1,-0.2 1,-0.4 2,-0.1 0.115 77.3 129.1 108.7 -17.6 -9.6 -6.9 3.7 70 70 A S < - 0 0 51 -3,-1.1 -1,-0.4 -46,-0.2 -46,-0.4 -0.424 41.8-158.0 -71.5 144.6 -9.3 -7.9 0.1 71 71 A K + 0 0 151 1,-0.2 -48,-0.2 -48,-0.2 -49,-0.0 -0.904 61.4 27.7-125.2 153.2 -8.5 -11.6 -0.6 72 72 A N - 0 0 81 -50,-0.4 2,-0.8 -2,-0.3 -1,-0.2 0.998 65.1-178.8 61.0 74.6 -7.0 -13.3 -3.6 73 73 A I E -D 22 0B 13 -51,-3.2 -51,-1.0 -3,-0.2 -1,-0.2 -0.806 14.1-152.8-109.2 88.9 -4.9 -10.6 -5.0 74 74 A R E -D 21 0B 166 -2,-0.8 3,-0.3 -53,-0.3 -62,-0.3 0.094 30.3 -83.8 -50.5 171.2 -3.2 -11.9 -8.1 75 75 A L S S+ 0 0 60 -55,-0.9 -1,-0.1 1,-0.2 3,-0.1 -0.432 109.2 37.4 -80.4 156.7 0.1 -10.6 -9.3 76 76 A G S S+ 0 0 49 -64,-1.1 2,-0.5 1,-0.2 -1,-0.2 0.880 83.8 140.3 69.8 40.4 0.3 -7.4 -11.4 77 77 A S - 0 0 15 -3,-0.3 -65,-1.4 -4,-0.1 2,-0.4 -0.971 55.5-123.0-120.8 128.9 -2.5 -5.8 -9.6 78 78 A L E +A 11 0A 54 -2,-0.5 -67,-0.2 -67,-0.2 3,-0.1 -0.557 37.3 163.0 -71.1 120.4 -2.6 -2.1 -8.7 79 79 A I E - 0 0 0 -69,-2.2 -13,-1.2 1,-0.5 2,-0.3 0.563 67.5 -20.7-110.8 -19.2 -3.0 -1.8 -4.9 80 80 A G E -A 10 0A 0 -70,-0.8 -70,-2.7 -16,-0.3 -1,-0.5 -0.907 58.0-125.1 177.5 156.9 -1.9 1.8 -4.7 81 81 A L E -AC 9 63A 44 -18,-1.1 -18,-1.1 -2,-0.3 -19,-1.0 -0.803 18.4-141.7-115.4 157.5 0.1 4.6 -6.4 82 82 A I E -AC 8 61A 5 -74,-2.2 -74,-2.1 -2,-0.3 2,-0.4 -0.861 8.1-159.0-118.7 153.5 3.0 6.7 -5.1 83 83 A V E - C 0 60A 17 -23,-2.2 -23,-3.1 -2,-0.3 3,-0.2 -0.999 35.0 -95.5-135.8 133.8 3.7 10.4 -5.7 84 84 A E > - 0 0 119 -2,-0.4 3,-1.8 -25,-0.2 -25,-0.1 -0.185 61.0 -87.3 -47.2 125.5 7.1 12.2 -5.3 85 85 A E T 3 S+ 0 0 109 1,-0.2 2,-0.3 -27,-0.2 -1,-0.1 -0.054 116.8 22.9 -38.7 127.3 7.2 13.7 -1.9 86 86 A G T 3 S+ 0 0 73 1,-0.4 -1,-0.2 -3,-0.2 3,-0.2 -0.444 87.2 124.4 109.2 -56.2 5.6 17.1 -2.1 87 87 A E S < S- 0 0 71 -3,-1.8 2,-1.7 -2,-0.3 -1,-0.4 -0.016 80.8 -98.1 -38.9 137.2 3.4 16.6 -5.2 88 88 A D + 0 0 89 1,-0.2 4,-0.3 -3,-0.1 -1,-0.2 -0.463 46.2 179.1 -65.6 89.6 -0.2 17.3 -4.4 89 89 A W S S+ 0 0 101 -2,-1.7 -1,-0.2 1,-0.2 3,-0.2 0.938 80.9 50.9 -57.7 -49.1 -1.3 13.7 -3.8 90 90 A K S S- 0 0 158 1,-0.2 2,-0.2 -3,-0.2 -1,-0.2 0.967 137.5 -40.8 -51.5 -62.4 -4.8 14.9 -3.1 91 91 A H - 0 0 165 2,-0.1 2,-0.3 0, 0.0 -1,-0.2 -0.740 55.1-142.1-174.5 121.7 -5.0 17.0 -6.3 92 92 A V + 0 0 55 -4,-0.3 2,-0.3 -2,-0.2 5,-0.1 -0.632 35.4 141.3 -89.8 147.7 -2.5 19.2 -8.1 93 93 A S + 0 0 98 -2,-0.3 3,-0.1 3,-0.2 5,-0.1 -0.871 16.2 84.0 179.6 148.0 -3.5 22.4 -9.7 94 94 A G S S- 0 0 39 4,-0.5 -2,-0.0 -2,-0.3 3,-0.0 -0.982 85.6 -44.6 149.8-157.1 -2.3 26.0 -10.3 95 95 A P S S+ 0 0 143 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.916 121.4 41.8 -75.0 -46.4 -0.1 28.1 -12.6 96 96 A S S S+ 0 0 99 1,-0.2 -3,-0.2 2,-0.1 0, 0.0 -0.771 110.2 25.3-104.4 149.2 2.8 25.6 -12.6 97 97 A S 0 0 83 -2,-0.3 -1,-0.2 1,-0.1 0, 0.0 0.981 360.0 360.0 63.5 86.0 2.6 21.8 -12.8 98 98 A G 0 0 100 -3,-0.1 -4,-0.5 -5,-0.1 -2,-0.1 0.761 360.0 360.0 88.1 360.0 -0.7 21.1 -14.6