==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 26-APR-06 2DNX . COMPND 2 MOLECULE: SYNTAXIN-12; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.ABE,H.HIROTA,Y.MUTO,S.YOKOYAMA,RIKEN STRUCTURAL . 130 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 10251.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 105 80.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 93 71.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 113 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-159.1 9.5 -16.2 11.9 2 2 A S + 0 0 96 11,-0.1 2,-0.3 12,-0.0 3,-0.0 -0.479 360.0 168.1 -68.6 130.5 12.2 -16.3 9.2 3 3 A S + 0 0 118 -2,-0.2 2,-0.3 0, 0.0 -1,-0.0 -0.794 41.4 30.8-150.3 100.8 15.2 -18.3 10.3 4 4 A G - 0 0 71 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.841 55.7-131.1 143.6-178.8 17.9 -19.3 7.8 5 5 A S + 0 0 112 -2,-0.3 -1,-0.0 3,-0.0 -3,-0.0 -0.590 65.6 78.4-174.2 104.7 19.6 -18.3 4.6 6 6 A S S S+ 0 0 110 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 0.068 80.5 59.3-170.7 -58.3 20.2 -20.4 1.6 7 7 A G + 0 0 51 2,-0.0 -3,-0.0 0, 0.0 -2,-0.0 0.977 64.4 179.3 -51.2 -77.0 17.1 -20.9 -0.6 8 8 A Q + 0 0 178 1,-0.2 2,-0.3 3,-0.0 -3,-0.0 0.992 26.0 131.6 66.7 80.5 16.4 -17.3 -1.4 9 9 A L S S- 0 0 129 2,-0.0 2,-3.3 0, 0.0 -1,-0.2 -0.980 72.5 -89.5-156.4 158.2 13.3 -17.4 -3.7 10 10 A R + 0 0 176 -2,-0.3 2,-0.1 4,-0.1 5,-0.0 -0.360 63.9 169.5 -70.7 65.8 9.9 -15.8 -4.0 11 11 A D > - 0 0 88 -2,-3.3 4,-3.8 1,-0.1 3,-0.4 -0.464 50.4-108.2 -80.3 153.5 8.3 -18.4 -1.8 12 12 A F H > S+ 0 0 35 1,-0.3 4,-3.5 2,-0.2 5,-0.2 0.870 125.8 44.8 -45.6 -45.1 4.8 -18.0 -0.5 13 13 A S H > S+ 0 0 86 2,-0.2 4,-1.7 1,-0.2 -1,-0.3 0.823 114.5 49.4 -69.7 -32.6 6.2 -17.2 2.9 14 14 A S H > S+ 0 0 54 -3,-0.4 4,-1.1 2,-0.2 -2,-0.2 0.859 117.5 40.0 -73.4 -37.6 8.8 -15.0 1.3 15 15 A I H X S+ 0 0 3 -4,-3.8 4,-3.5 2,-0.2 -2,-0.2 0.941 113.7 53.4 -75.4 -51.2 6.1 -13.2 -0.7 16 16 A I H X S+ 0 0 19 -4,-3.5 4,-3.3 -5,-0.3 5,-0.2 0.953 107.7 49.7 -46.1 -66.3 3.6 -13.1 2.1 17 17 A Q H X S+ 0 0 106 -4,-1.7 4,-2.5 1,-0.3 -1,-0.2 0.863 114.5 47.0 -40.3 -47.5 6.0 -11.5 4.6 18 18 A T H X S+ 0 0 72 -4,-1.1 4,-2.8 2,-0.2 -1,-0.3 0.918 111.1 50.6 -62.7 -46.0 6.7 -8.9 1.9 19 19 A C H X S+ 0 0 0 -4,-3.5 4,-2.5 1,-0.2 -2,-0.2 0.949 109.3 51.6 -56.4 -52.1 3.1 -8.4 1.1 20 20 A S H X S+ 0 0 65 -4,-3.3 4,-2.2 1,-0.2 -2,-0.2 0.934 110.6 48.4 -49.2 -55.1 2.4 -7.9 4.8 21 21 A G H X S+ 0 0 20 -4,-2.5 4,-2.3 -5,-0.2 -2,-0.2 0.948 107.6 53.9 -50.4 -59.2 5.1 -5.3 5.0 22 22 A N H X S+ 0 0 14 -4,-2.8 4,-3.1 1,-0.2 -1,-0.2 0.905 107.2 52.7 -41.2 -56.1 3.9 -3.4 2.0 23 23 A I H X S+ 0 0 18 -4,-2.5 4,-2.9 1,-0.2 5,-0.3 0.937 107.5 51.2 -45.3 -60.6 0.5 -3.1 3.5 24 24 A Q H X S+ 0 0 116 -4,-2.2 4,-2.9 1,-0.2 -1,-0.2 0.919 111.8 46.6 -42.0 -61.7 1.9 -1.7 6.7 25 25 A R H X>S+ 0 0 148 -4,-2.3 4,-3.0 2,-0.3 5,-0.5 0.935 109.6 53.6 -46.9 -58.3 3.9 1.0 4.7 26 26 A I H X5S+ 0 0 2 -4,-3.1 4,-1.9 1,-0.3 -1,-0.2 0.895 114.9 41.4 -43.5 -49.9 0.8 1.8 2.6 27 27 A S H X5S+ 0 0 42 -4,-2.9 4,-0.8 -5,-0.2 -1,-0.3 0.817 116.5 52.3 -68.5 -31.9 -1.1 2.3 5.8 28 28 A Q H >X5S+ 0 0 101 -4,-2.9 3,-2.1 -5,-0.3 4,-2.1 0.994 110.1 42.9 -66.6 -65.6 2.0 4.1 7.3 29 29 A A H 3X5S+ 0 0 6 -4,-3.0 4,-2.4 1,-0.3 5,-0.2 0.871 111.6 58.0 -47.7 -41.9 2.6 6.6 4.5 30 30 A T H 3XX S+ 0 0 22 -4,-1.7 4,-1.6 -5,-0.3 3,-0.9 0.967 99.8 42.0 -50.5 -66.7 -1.9 17.2 6.7 38 38 A S H 3< S+ 0 0 95 -4,-1.6 3,-0.3 1,-0.3 -1,-0.2 0.903 106.4 65.4 -47.7 -48.9 -2.8 19.0 9.9 39 39 A Q H 3< S+ 0 0 106 -4,-1.3 -1,-0.3 1,-0.3 -2,-0.2 0.877 103.3 46.2 -40.2 -50.8 0.8 20.2 10.1 40 40 A L H << S+ 0 0 18 -4,-1.8 2,-3.5 -3,-0.9 -1,-0.3 0.896 95.2 80.0 -60.9 -41.7 0.1 22.2 6.9 41 41 A G < + 0 0 50 -4,-1.6 -1,-0.2 -3,-0.3 4,-0.1 -0.336 63.8 104.6 -67.5 66.9 -3.2 23.4 8.4 42 42 A T S S- 0 0 91 -2,-3.5 2,-3.1 2,-0.9 -1,-0.2 -0.234 101.8 -93.5-142.8 46.4 -1.4 26.0 10.5 43 43 A K S S+ 0 0 223 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 -0.328 111.6 50.4 74.5 -59.4 -2.1 29.3 8.7 44 44 A Q S S- 0 0 148 -2,-3.1 -2,-0.9 -3,-0.0 2,-0.3 -0.440 74.9-145.8-101.6 177.3 1.1 28.9 6.8 45 45 A D - 0 0 86 -2,-0.2 2,-0.4 -4,-0.1 -5,-0.1 -0.892 1.4-143.8-139.6 167.8 2.6 26.0 4.8 46 46 A S >> - 0 0 62 -2,-0.3 4,-2.0 1,-0.1 3,-1.6 -0.996 14.2-145.6-140.7 131.5 6.0 24.5 4.0 47 47 A S H 3> S+ 0 0 93 -2,-0.4 4,-2.7 1,-0.3 5,-0.3 0.792 101.0 70.5 -62.1 -28.8 7.2 23.0 0.8 48 48 A K H 3> S+ 0 0 165 2,-0.2 4,-0.9 1,-0.2 -1,-0.3 0.793 107.9 37.1 -58.0 -28.5 9.2 20.6 3.0 49 49 A L H <> S+ 0 0 26 -3,-1.6 4,-2.6 2,-0.2 3,-0.4 0.937 110.7 55.4 -86.5 -61.2 5.9 19.1 3.9 50 50 A Q H X S+ 0 0 89 -4,-2.0 4,-1.7 1,-0.3 -2,-0.2 0.832 112.9 47.5 -39.3 -41.8 4.0 19.3 0.6 51 51 A E H X S+ 0 0 107 -4,-2.7 4,-2.8 2,-0.2 -1,-0.3 0.916 107.3 54.7 -68.0 -45.3 7.0 17.4 -0.8 52 52 A N H X S+ 0 0 74 -4,-0.9 4,-3.1 -3,-0.4 5,-0.2 0.916 105.9 54.6 -53.6 -47.3 6.9 14.8 2.0 53 53 A L H X S+ 0 0 18 -4,-2.6 4,-3.0 2,-0.2 3,-0.3 0.969 110.8 42.7 -49.6 -67.9 3.3 14.1 1.3 54 54 A Q H X S+ 0 0 118 -4,-1.7 4,-3.0 1,-0.3 5,-0.3 0.926 113.9 51.5 -43.4 -61.3 3.9 13.3 -2.4 55 55 A Q H X S+ 0 0 117 -4,-2.8 4,-2.1 1,-0.3 -1,-0.3 0.876 113.9 44.9 -44.1 -46.4 7.0 11.3 -1.6 56 56 A L H X S+ 0 0 22 -4,-3.1 4,-1.8 -3,-0.3 -1,-0.3 0.855 117.0 47.5 -67.3 -36.0 4.9 9.4 1.0 57 57 A Q H X S+ 0 0 43 -4,-3.0 4,-3.1 -3,-0.3 -2,-0.2 0.995 113.9 42.4 -67.4 -66.3 2.1 9.2 -1.6 58 58 A H H X S+ 0 0 107 -4,-3.0 4,-2.2 1,-0.2 5,-0.3 0.930 112.8 55.2 -44.4 -59.7 4.1 8.0 -4.6 59 59 A S H X S+ 0 0 56 -4,-2.1 4,-2.8 -5,-0.3 -1,-0.2 0.901 111.8 42.9 -38.9 -60.5 6.1 5.6 -2.5 60 60 A T H X S+ 0 0 0 -4,-1.8 4,-2.7 1,-0.2 -1,-0.3 0.899 108.4 61.9 -54.7 -44.7 2.9 4.0 -1.2 61 61 A N H >X S+ 0 0 76 -4,-3.1 4,-2.2 1,-0.2 3,-0.6 0.946 110.8 36.7 -45.0 -65.7 1.5 4.1 -4.8 62 62 A Q H 3X S+ 0 0 91 -4,-2.2 4,-2.5 1,-0.3 5,-0.3 0.938 110.0 62.6 -53.4 -53.1 4.2 1.8 -6.1 63 63 A L H 3X S+ 0 0 30 -4,-2.8 4,-2.4 -5,-0.3 -1,-0.3 0.859 108.6 43.9 -39.4 -45.7 4.3 -0.2 -2.9 64 64 A A H < S+ 0 0 3 -4,-3.6 3,-1.5 2,-0.2 -2,-0.2 0.997 107.7 38.4 -64.3 -67.4 1.3 -15.6 -4.9 75 75 A G H 3< S+ 0 0 55 -4,-1.2 -1,-0.2 1,-0.3 -2,-0.2 0.756 109.0 68.1 -55.0 -25.7 -1.8 -17.4 -6.1 76 76 A S H 3< S+ 0 0 101 -4,-1.1 -1,-0.3 -5,-0.1 -2,-0.2 0.883 80.5 96.7 -61.6 -40.3 0.3 -18.2 -9.2 77 77 A L S << S- 0 0 55 -3,-1.5 -66,-0.0 -4,-1.2 -3,-0.0 -0.003 84.9-101.4 -47.0 157.3 2.5 -20.5 -7.1 78 78 A P - 0 0 106 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.057 33.8-109.1 -74.9-178.7 1.7 -24.2 -7.2 79 79 A L - 0 0 105 1,-0.0 4,-0.1 10,-0.0 7,-0.1 -0.882 26.4-114.7-117.5 148.8 -0.2 -26.2 -4.5 80 80 A P - 0 0 37 0, 0.0 6,-0.1 0, 0.0 -1,-0.0 -0.235 26.1-113.3 -75.0 167.2 1.1 -28.8 -2.1 81 81 A L S S+ 0 0 170 4,-0.0 2,-0.3 2,-0.0 -2,-0.0 0.829 100.3 77.1 -68.8 -32.9 0.1 -32.4 -2.1 82 82 A S S > S- 0 0 69 1,-0.1 4,-0.7 4,-0.0 3,-0.1 -0.616 71.3-151.1 -82.3 137.5 -1.6 -31.9 1.2 83 83 A T H > S+ 0 0 93 -2,-0.3 4,-1.9 1,-0.2 5,-0.2 0.681 93.8 68.6 -78.6 -19.5 -5.0 -30.2 1.2 84 84 A S H > S+ 0 0 75 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.892 103.7 41.8 -65.2 -41.4 -4.3 -28.9 4.6 85 85 A E H > S+ 0 0 104 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.726 107.7 64.6 -77.0 -23.4 -1.6 -26.6 3.3 86 86 A Q H X S+ 0 0 42 -4,-0.7 4,-2.2 2,-0.2 5,-0.2 0.947 108.0 37.9 -63.6 -51.3 -3.8 -25.7 0.3 87 87 A R H X S+ 0 0 171 -4,-1.9 4,-4.3 1,-0.2 5,-0.3 0.958 113.1 55.2 -64.7 -53.3 -6.4 -24.0 2.5 88 88 A Q H X S+ 0 0 108 -4,-1.8 4,-1.4 1,-0.2 -1,-0.2 0.786 110.5 51.4 -50.1 -29.5 -3.9 -22.5 4.8 89 89 A Q H X S+ 0 0 44 -4,-1.3 4,-2.3 2,-0.2 3,-0.3 0.991 116.1 34.1 -71.6 -65.8 -2.4 -21.0 1.7 90 90 A R H X S+ 0 0 136 -4,-2.2 4,-3.9 1,-0.2 -2,-0.2 0.872 115.5 60.2 -57.2 -39.6 -5.4 -19.5 0.1 91 91 A L H X S+ 0 0 79 -4,-4.3 4,-1.8 -5,-0.2 -1,-0.2 0.918 107.1 45.6 -54.2 -47.3 -6.7 -18.7 3.5 92 92 A Q H X S+ 0 0 78 -4,-1.4 4,-2.6 -5,-0.3 -2,-0.2 0.948 114.3 46.8 -61.1 -52.0 -3.6 -16.5 4.2 93 93 A K H X S+ 0 0 41 -4,-2.3 4,-3.2 1,-0.2 5,-0.3 0.913 105.9 61.0 -56.1 -45.7 -3.9 -14.8 0.8 94 94 A E H X S+ 0 0 121 -4,-3.9 4,-1.8 1,-0.2 -1,-0.2 0.906 109.4 41.3 -46.8 -50.8 -7.5 -14.3 1.4 95 95 A R H X S+ 0 0 161 -4,-1.8 4,-3.9 -3,-0.2 5,-0.3 0.929 111.3 56.5 -64.1 -47.6 -6.7 -12.2 4.4 96 96 A L H X S+ 0 0 11 -4,-2.6 4,-3.7 1,-0.2 5,-0.3 0.936 106.7 49.9 -48.3 -55.6 -3.8 -10.5 2.7 97 97 A M H X S+ 0 0 74 -4,-3.2 4,-1.9 2,-0.2 -1,-0.2 0.907 116.6 42.0 -50.0 -49.2 -6.1 -9.3 -0.1 98 98 A N H X S+ 0 0 117 -4,-1.8 4,-2.6 -5,-0.3 3,-0.4 0.984 114.9 48.8 -62.6 -60.8 -8.5 -8.0 2.5 99 99 A D H X S+ 0 0 84 -4,-3.9 4,-2.0 1,-0.3 5,-0.2 0.919 111.2 51.1 -43.1 -57.4 -5.9 -6.5 4.8 100 100 A F H X S+ 0 0 15 -4,-3.7 4,-2.9 -5,-0.3 -1,-0.3 0.876 110.4 50.8 -48.6 -44.2 -4.3 -4.8 1.8 101 101 A S H X S+ 0 0 54 -4,-1.9 4,-2.9 -3,-0.4 5,-0.4 0.974 104.1 54.4 -58.7 -59.3 -7.7 -3.4 0.8 102 102 A A H X S+ 0 0 65 -4,-2.6 4,-1.2 1,-0.3 -1,-0.2 0.828 115.1 43.6 -43.4 -36.9 -8.4 -2.0 4.2 103 103 A A H X S+ 0 0 4 -4,-2.0 4,-1.9 -5,-0.3 -1,-0.3 0.892 112.2 52.4 -76.3 -42.7 -5.1 -0.2 3.8 104 104 A L H X S+ 0 0 62 -4,-2.9 4,-2.3 1,-0.2 3,-0.3 0.973 106.7 51.5 -56.1 -60.3 -5.8 0.7 0.2 105 105 A N H X S+ 0 0 102 -4,-2.9 4,-2.9 1,-0.3 5,-0.4 0.885 105.7 58.6 -42.9 -48.1 -9.1 2.3 1.0 106 106 A N H X S+ 0 0 64 -4,-1.2 4,-1.6 -5,-0.4 -1,-0.3 0.940 106.0 46.6 -47.0 -58.7 -7.3 4.3 3.7 107 107 A F H X S+ 0 0 16 -4,-1.9 4,-3.1 -3,-0.3 -1,-0.3 0.882 113.5 51.3 -51.7 -43.6 -5.0 5.8 1.1 108 108 A Q H X S+ 0 0 97 -4,-2.3 4,-2.4 2,-0.3 3,-0.3 0.987 107.3 48.3 -57.8 -65.7 -8.0 6.5 -1.1 109 109 A A H X S+ 0 0 52 -4,-2.9 4,-1.3 1,-0.3 -1,-0.2 0.757 117.4 47.8 -46.9 -25.3 -10.0 8.3 1.5 110 110 A V H X S+ 0 0 0 -4,-1.6 4,-2.7 -5,-0.4 -1,-0.3 0.869 103.9 57.6 -83.3 -41.8 -6.7 10.2 2.1 111 111 A Q H X S+ 0 0 93 -4,-3.1 4,-3.0 -3,-0.3 -2,-0.2 0.864 106.9 51.3 -55.7 -38.8 -6.2 10.8 -1.6 112 112 A R H X S+ 0 0 153 -4,-2.4 4,-2.8 2,-0.2 -1,-0.2 0.971 108.5 48.2 -62.7 -57.2 -9.5 12.6 -1.7 113 113 A R H X S+ 0 0 147 -4,-1.3 4,-1.8 1,-0.2 -2,-0.2 0.892 114.6 48.2 -49.9 -45.5 -8.8 14.9 1.3 114 114 A V H >X S+ 0 0 25 -4,-2.7 4,-2.0 1,-0.2 3,-0.5 0.969 109.4 50.5 -60.0 -56.7 -5.4 15.7 -0.3 115 115 A S H 3X S+ 0 0 58 -4,-3.0 4,-1.4 1,-0.3 -1,-0.2 0.854 107.2 57.4 -49.2 -39.0 -7.0 16.4 -3.7 116 116 A E H 3X S+ 0 0 67 -4,-2.8 4,-2.4 2,-0.2 3,-0.3 0.924 103.7 50.5 -58.5 -47.7 -9.4 18.7 -1.9 117 117 A K H