==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-OCT-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SPLICING 08-FEB-12 4DNN . COMPND 2 MOLECULE: PROTEIN QUAKING; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.BEUCK,S.QU,J.R.WILLIAMSON . 101 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6836.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 78 77.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 64 63.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 1 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 121 0, 0.0 2,-0.2 0, 0.0 48,-0.1 0.000 360.0 360.0 360.0 109.7 17.9 7.5 15.6 2 -1 A S - 0 0 59 43,-0.1 43,-0.0 46,-0.1 44,-0.0 -0.577 360.0-139.8 -99.0 151.1 20.6 9.5 17.6 3 14 A T >> - 0 0 88 -2,-0.2 4,-0.6 1,-0.1 3,-0.5 -0.938 3.3-162.4-113.7 122.2 22.2 12.8 17.0 4 15 A P H 3> S+ 0 0 48 0, 0.0 4,-3.1 0, 0.0 5,-0.2 0.505 74.0 88.0 -75.2 -9.2 26.0 13.3 17.7 5 16 A D H 3> S+ 0 0 88 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.934 89.1 46.9 -63.8 -46.4 25.8 17.1 17.8 6 17 A Y H <> S+ 0 0 59 -3,-0.5 4,-2.4 1,-0.2 -1,-0.2 0.964 114.5 46.8 -58.0 -52.7 25.0 17.2 21.5 7 18 A L H X S+ 0 0 23 -4,-0.6 4,-2.5 1,-0.2 -2,-0.2 0.910 111.0 53.1 -55.7 -42.9 27.8 14.7 22.3 8 19 A X H X S+ 0 0 114 -4,-3.1 4,-1.7 1,-0.2 -1,-0.2 0.917 108.8 49.4 -59.5 -43.4 30.2 16.6 20.1 9 20 A Q H X S+ 0 0 72 -4,-2.6 4,-2.1 1,-0.2 70,-0.3 0.923 111.1 50.1 -60.6 -44.8 29.4 19.8 22.0 10 21 A L H X S+ 0 0 0 -4,-2.4 4,-2.5 1,-0.2 -2,-0.2 0.921 108.8 50.6 -60.8 -44.6 30.0 18.1 25.4 11 22 A X H X S+ 0 0 67 -4,-2.5 4,-2.1 1,-0.2 -1,-0.2 0.822 108.1 53.5 -69.9 -26.1 33.3 16.7 24.4 12 23 A N H X S+ 0 0 95 -4,-1.7 4,-2.0 2,-0.2 -1,-0.2 0.891 109.1 48.6 -70.0 -40.4 34.4 20.1 23.2 13 24 A D H X S+ 0 0 2 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.901 112.8 50.0 -56.5 -42.9 33.5 21.5 26.7 14 25 A K H X S+ 0 0 51 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.877 108.2 50.7 -67.6 -38.5 35.4 18.6 28.2 15 26 A K H X S+ 0 0 124 -4,-2.1 4,-1.1 2,-0.2 -1,-0.2 0.913 112.0 49.3 -62.6 -42.4 38.5 19.3 26.0 16 27 A L H >X S+ 0 0 57 -4,-2.0 3,-0.6 2,-0.2 4,-0.6 0.931 109.6 49.3 -63.7 -47.8 38.3 22.9 27.2 17 28 A X H >< S+ 0 0 0 -4,-2.7 3,-1.5 1,-0.3 7,-0.3 0.911 108.8 54.1 -57.9 -43.6 38.0 22.0 30.9 18 29 A S H 3< S+ 0 0 69 -4,-2.2 -1,-0.3 1,-0.3 -2,-0.2 0.775 104.5 55.9 -58.1 -31.4 41.0 19.6 30.5 19 30 A S H << S+ 0 0 82 -4,-1.1 -1,-0.3 -3,-0.6 -2,-0.2 0.596 108.2 49.7 -77.1 -13.9 42.9 22.6 29.1 20 31 A L XX + 0 0 47 -3,-1.5 4,-2.5 -4,-0.6 3,-0.7 -0.498 58.1 156.7-126.7 62.3 42.3 24.6 32.2 21 32 A P H 3> S+ 0 0 88 0, 0.0 4,-2.3 0, 0.0 -1,-0.1 0.796 74.8 61.1 -61.0 -28.1 43.2 22.5 35.2 22 33 A N H 34 S+ 0 0 137 2,-0.2 4,-0.2 1,-0.2 -2,-0.1 0.881 110.2 39.4 -64.6 -40.7 43.6 25.6 37.3 23 34 A F H X4 S+ 0 0 79 -3,-0.7 3,-1.4 2,-0.2 4,-0.3 0.873 113.7 54.1 -73.8 -41.6 40.0 26.7 36.8 24 35 A S H >< S+ 0 0 18 -4,-2.5 3,-1.8 -7,-0.3 7,-0.2 0.924 101.8 61.0 -57.7 -41.4 38.7 23.1 37.2 25 36 A G T 3< S+ 0 0 65 -4,-2.3 -1,-0.3 1,-0.3 -2,-0.2 0.579 95.5 60.1 -64.2 -13.0 40.5 22.8 40.5 26 37 A I T < S+ 0 0 92 -3,-1.4 2,-0.4 -4,-0.2 -1,-0.3 0.436 93.7 76.3 -98.4 0.8 38.5 25.7 42.1 27 38 A F < - 0 0 15 -3,-1.8 4,-0.1 -4,-0.3 34,-0.1 -0.887 70.0-147.0-105.6 142.9 35.2 23.9 41.6 28 39 A N S S- 0 0 89 -2,-0.4 -1,-0.1 32,-0.3 33,-0.1 0.883 90.1 -1.6 -69.3 -40.4 34.0 21.0 43.8 29 40 A H S > S+ 0 0 25 31,-0.2 4,-2.1 32,-0.1 5,-0.2 0.446 93.7 109.8-137.2 -3.6 32.0 19.1 41.2 30 41 A L H > S+ 0 0 2 1,-0.2 4,-1.2 2,-0.2 5,-0.1 0.876 84.9 38.5 -59.1 -53.2 32.0 20.9 37.9 31 42 A E H > S+ 0 0 40 -7,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.860 113.5 56.1 -68.0 -37.9 34.1 18.6 35.7 32 43 A R H > S+ 0 0 88 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.904 105.5 53.1 -57.6 -41.4 32.8 15.4 37.3 33 44 A L H X S+ 0 0 7 -4,-2.1 4,-1.6 1,-0.2 -1,-0.2 0.839 108.5 49.3 -65.0 -34.0 29.3 16.5 36.3 34 45 A L H X S+ 0 0 0 -4,-1.2 4,-2.3 2,-0.2 -1,-0.2 0.912 110.6 50.9 -69.5 -42.6 30.3 17.0 32.7 35 46 A D H X S+ 0 0 59 -4,-2.2 4,-2.3 1,-0.2 -2,-0.2 0.892 110.4 49.5 -59.4 -43.1 32.0 13.6 32.7 36 47 A E H X S+ 0 0 71 -4,-2.4 4,-2.0 2,-0.2 -1,-0.2 0.835 109.8 50.3 -67.3 -35.2 28.8 12.0 34.0 37 48 A E H X S+ 0 0 21 -4,-1.6 4,-2.8 2,-0.2 -2,-0.2 0.904 110.4 50.3 -69.4 -41.0 26.6 13.8 31.4 38 49 A I H X S+ 0 0 18 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.931 111.3 48.1 -62.5 -44.9 28.9 12.5 28.6 39 50 A S H X S+ 0 0 79 -4,-2.3 4,-2.2 1,-0.2 -1,-0.2 0.891 112.4 50.2 -60.7 -41.9 28.8 8.9 30.0 40 51 A R H X S+ 0 0 90 -4,-2.0 4,-2.4 2,-0.2 -2,-0.2 0.940 110.2 49.3 -61.0 -49.3 25.0 9.2 30.1 41 52 A V H X S+ 0 0 14 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.928 111.6 48.0 -58.7 -46.9 24.7 10.6 26.6 42 53 A R H X S+ 0 0 138 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.910 111.4 50.5 -63.2 -42.3 26.9 7.8 25.1 43 54 A K H X S+ 0 0 141 -4,-2.2 4,-2.1 -5,-0.2 -1,-0.2 0.894 111.9 48.6 -61.1 -42.0 24.9 5.1 27.0 44 55 A D H X S+ 0 0 84 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.933 109.7 50.0 -64.4 -48.7 21.7 6.6 25.7 45 56 A X H < S+ 0 0 46 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.906 114.9 45.4 -58.1 -41.9 22.8 6.8 22.0 46 57 A Y H >< S+ 0 0 148 -4,-2.2 3,-1.0 -5,-0.2 4,-0.3 0.868 111.0 52.3 -69.6 -35.9 24.0 3.2 22.2 47 58 A N H >< S+ 0 0 63 -4,-2.1 3,-1.2 1,-0.3 -2,-0.2 0.780 95.4 66.9 -77.0 -22.5 20.8 2.0 24.0 48 59 A D T 3< S+ 0 0 108 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.1 0.147 97.3 61.1 -75.9 20.6 18.5 3.5 21.3 49 60 A T T < 0 0 98 -3,-1.0 -1,-0.2 -5,-0.1 -2,-0.2 0.507 360.0 360.0-114.0 -20.8 20.2 0.8 19.2 50 61 A L < 0 0 145 -3,-1.2 -3,-0.0 -4,-0.3 0, 0.0 -0.505 360.0 360.0-101.0 360.0 18.9 -2.1 21.2 51 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 52 -2 B G 0 0 131 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-143.6 17.8 17.5 58.6 53 -1 B S + 0 0 106 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.125 360.0 48.2 -80.0 168.3 21.3 18.7 58.2 54 14 B T + 0 0 86 0, 0.0 2,-2.2 0, 0.0 3,-0.2 0.270 45.5 178.4-106.3 124.2 24.1 18.8 57.1 55 15 B P > + 0 0 35 0, 0.0 4,-1.8 0, 0.0 3,-0.1 -0.402 19.2 159.5 -80.8 63.3 23.3 19.0 53.3 56 16 B D H > + 0 0 90 -2,-2.2 4,-2.2 1,-0.2 5,-0.2 0.802 64.3 53.8 -59.5 -43.2 26.9 19.2 52.3 57 17 B Y H > S+ 0 0 68 -3,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.949 109.1 48.7 -62.5 -48.4 26.6 18.2 48.7 58 18 B L H > S+ 0 0 23 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.901 110.6 51.7 -57.4 -42.5 24.0 20.8 47.9 59 19 B X H X S+ 0 0 101 -4,-1.8 4,-2.0 1,-0.2 -1,-0.2 0.900 109.5 49.1 -64.1 -44.0 26.1 23.5 49.6 60 20 B Q H X S+ 0 0 66 -4,-2.2 4,-2.0 2,-0.2 -32,-0.3 0.907 113.1 47.7 -58.3 -43.7 29.2 22.6 47.5 61 21 B L H X S+ 0 0 0 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.928 111.6 49.1 -64.3 -47.0 27.1 22.6 44.3 62 22 B X H X S+ 0 0 65 -4,-2.8 4,-2.5 2,-0.2 -1,-0.2 0.828 109.8 52.6 -64.0 -33.9 25.5 26.0 45.1 63 23 B N H X S+ 0 0 95 -4,-2.0 4,-2.1 -5,-0.2 -1,-0.2 0.901 108.8 50.0 -63.8 -41.8 29.0 27.3 45.9 64 24 B D H X S+ 0 0 2 -4,-2.0 4,-2.4 2,-0.2 -2,-0.2 0.897 110.8 50.5 -59.9 -41.6 30.1 26.1 42.5 65 25 B K H X S+ 0 0 52 -4,-2.3 4,-2.6 2,-0.2 5,-0.2 0.948 109.7 48.6 -66.6 -46.3 27.1 27.8 40.9 66 26 B K H X S+ 0 0 125 -4,-2.5 4,-1.6 1,-0.2 -1,-0.2 0.878 111.2 51.9 -58.9 -37.4 27.9 31.2 42.7 67 27 B L H X S+ 0 0 52 -4,-2.1 4,-0.6 2,-0.2 -1,-0.2 0.927 109.0 49.4 -68.6 -41.1 31.5 30.9 41.5 68 28 B X H >< S+ 0 0 0 -4,-2.4 3,-1.2 1,-0.2 7,-0.4 0.910 110.0 50.9 -59.9 -44.7 30.3 30.3 37.9 69 29 B S H 3< S+ 0 0 71 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.833 106.6 56.2 -61.3 -31.3 28.0 33.3 38.1 70 30 B S H 3< S+ 0 0 84 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.649 108.6 49.2 -76.3 -15.9 31.0 35.3 39.4 71 31 B L S+ 0 0 88 0, 0.0 4,-1.9 0, 0.0 -1,-0.1 0.815 77.7 53.5 -57.7 -34.1 30.7 35.1 33.2 73 33 B N H 4 S+ 0 0 145 2,-0.2 4,-0.2 1,-0.2 -2,-0.1 0.871 112.7 43.2 -69.1 -38.5 33.6 35.1 30.8 74 34 B F H >4 S+ 0 0 15 -3,-0.5 3,-1.3 1,-0.2 4,-0.2 0.930 115.9 48.1 -68.4 -47.0 34.8 31.7 32.0 75 35 B S H >< S+ 0 0 16 -4,-2.9 3,-1.3 -7,-0.4 7,-0.3 0.855 105.0 62.1 -62.5 -32.3 31.2 30.3 32.0 76 36 B G T 3< S+ 0 0 59 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.494 89.1 66.4 -78.0 -4.7 30.6 31.8 28.5 77 37 B I T < S+ 0 0 87 -3,-1.3 2,-0.3 -4,-0.2 -1,-0.3 0.465 91.9 77.6 -93.1 -1.5 33.2 29.8 26.7 78 38 B F < - 0 0 19 -3,-1.3 4,-0.1 -4,-0.2 -68,-0.1 -0.818 67.8-148.7-106.5 149.7 31.3 26.5 27.4 79 39 B N S S- 0 0 95 -2,-0.3 -1,-0.1 -70,-0.3 -69,-0.1 0.856 91.0 -1.5 -77.8 -40.7 28.3 25.2 25.6 80 40 B H S > S+ 0 0 25 -71,-0.2 4,-2.3 -70,-0.1 5,-0.2 0.444 94.8 106.7-136.0 -6.7 26.6 23.3 28.4 81 41 B L H > S+ 0 0 1 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.895 84.6 43.1 -60.0 -48.9 28.6 23.5 31.5 82 42 B E H > S+ 0 0 43 -7,-0.3 4,-2.6 1,-0.2 -1,-0.2 0.888 112.6 53.5 -66.9 -34.8 26.6 25.9 33.6 83 43 B R H > S+ 0 0 86 2,-0.2 4,-2.9 1,-0.2 -1,-0.2 0.923 105.9 53.3 -65.8 -42.4 23.3 24.3 32.6 84 44 B L H X S+ 0 0 7 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.894 109.9 49.0 -58.4 -38.6 24.5 20.8 33.7 85 45 B L H X S+ 0 0 0 -4,-1.7 4,-2.1 -5,-0.2 -2,-0.2 0.947 111.0 49.3 -65.3 -46.7 25.4 22.4 37.1 86 46 B D H X S+ 0 0 60 -4,-2.6 4,-2.1 1,-0.2 -2,-0.2 0.902 111.5 50.5 -55.5 -42.6 21.9 24.0 37.3 87 47 B E H X S+ 0 0 72 -4,-2.9 4,-2.3 1,-0.2 -1,-0.2 0.886 108.0 50.7 -68.1 -38.4 20.3 20.6 36.5 88 48 B E H X S+ 0 0 20 -4,-2.0 4,-2.6 2,-0.2 -1,-0.2 0.905 109.2 52.4 -65.4 -40.7 22.3 18.7 39.1 89 49 B I H X S+ 0 0 17 -4,-2.1 4,-2.6 2,-0.2 5,-0.2 0.938 110.1 47.4 -60.2 -48.5 21.3 21.2 41.7 90 50 B S H X S+ 0 0 81 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.906 112.0 50.9 -58.4 -44.2 17.5 20.9 40.8 91 51 B R H X S+ 0 0 98 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.924 111.3 48.2 -57.8 -46.5 17.9 17.1 40.9 92 52 B V H X S+ 0 0 20 -4,-2.6 4,-2.4 2,-0.2 -2,-0.2 0.926 112.2 47.4 -63.6 -46.5 19.5 17.2 44.3 93 53 B R H X S+ 0 0 141 -4,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.906 112.8 51.0 -62.1 -40.3 16.9 19.5 45.8 94 54 B K H X S+ 0 0 139 -4,-2.4 4,-2.6 -5,-0.2 -2,-0.2 0.924 111.5 46.4 -62.0 -47.2 14.2 17.3 44.3 95 55 B D H X S+ 0 0 84 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.895 110.5 52.5 -63.3 -40.9 15.6 14.1 45.8 96 56 B X H < S+ 0 0 78 -4,-2.4 4,-0.3 1,-0.2 -1,-0.2 0.860 113.3 45.3 -64.5 -33.2 16.1 15.7 49.3 97 57 B Y H >X S+ 0 0 142 -4,-1.7 3,-1.0 -5,-0.2 4,-0.7 0.901 112.2 49.4 -78.0 -43.0 12.5 16.8 49.3 98 58 B N H >< S+ 0 0 67 -4,-2.6 3,-0.9 1,-0.2 -2,-0.2 0.861 102.9 61.2 -62.9 -36.1 11.2 13.4 48.0 99 59 B D T 3< S+ 0 0 107 -4,-2.4 3,-0.5 1,-0.2 -1,-0.2 0.707 102.0 56.5 -61.6 -18.5 13.2 11.6 50.7 100 60 B T T <4 S+ 0 0 105 -3,-1.0 -1,-0.2 -4,-0.3 -2,-0.2 0.725 93.8 63.9 -86.1 -26.3 11.1 13.6 53.2 101 61 B L << 0 0 108 -3,-0.9 -1,-0.2 -4,-0.7 -2,-0.2 0.358 360.0 360.0 -81.3 7.1 7.8 12.4 51.9 102 62 B N 0 0 170 -3,-0.5 -3,-0.0 -4,-0.1 -4,-0.0 -0.618 360.0 360.0 -77.4 360.0 8.7 8.8 52.9