==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 20-DEC-99 1DO9 . COMPND 2 MOLECULE: CYTOCHROME B5; . SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; . AUTHOR L.BANCI,I.BERTINI,A.ROSATO,S.SCACCHIERI . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7302.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 67.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 9.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 18.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 21.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 107 0, 0.0 74,-0.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 107.3 -8.1 3.3 8.2 2 2 A K + 0 0 185 72,-0.1 2,-0.3 74,-0.1 74,-0.1 -0.608 360.0 80.9-137.7 76.6 -10.4 0.3 8.7 3 3 A D - 0 0 114 72,-0.7 2,-0.2 -2,-0.2 74,-0.1 -0.937 62.6-125.0-159.3 177.8 -12.7 -0.8 5.9 4 4 A V + 0 0 66 -2,-0.3 2,-1.9 72,-0.1 73,-0.3 -0.609 26.5 175.5-134.6 75.2 -12.6 -2.8 2.6 5 5 A K - 0 0 132 71,-1.7 71,-0.1 -2,-0.2 -2,-0.0 -0.620 36.0-131.5 -84.0 82.2 -13.8 -0.6 -0.2 6 6 A Y - 0 0 117 -2,-1.9 2,-0.3 71,-0.3 73,-0.2 -0.153 33.1-167.5 -31.9 110.4 -13.2 -3.1 -3.0 7 7 A Y B -a 79 0A 47 71,-2.0 73,-1.7 73,-0.0 2,-0.2 -0.775 17.6-117.7-113.9 157.1 -11.3 -1.0 -5.5 8 8 A T > - 0 0 42 -2,-0.3 4,-2.1 71,-0.2 3,-0.3 -0.632 28.7-112.1 -94.0 153.8 -10.4 -1.6 -9.2 9 9 A L H > S+ 0 0 37 1,-0.3 4,-2.4 -2,-0.2 5,-0.1 0.888 120.1 54.5 -52.3 -44.9 -6.8 -1.8 -10.5 10 10 A E H 4 S+ 0 0 159 1,-0.2 -1,-0.3 2,-0.2 -3,-0.0 0.914 105.6 52.8 -53.4 -47.9 -7.4 1.4 -12.4 11 11 A E H >4 S+ 0 0 60 -3,-0.3 3,-2.2 1,-0.2 -2,-0.2 0.944 109.6 47.1 -56.1 -50.8 -8.5 3.2 -9.1 12 12 A I H >< S+ 0 0 1 -4,-2.1 3,-1.4 1,-0.3 4,-0.4 0.917 110.4 53.4 -58.7 -38.2 -5.3 2.1 -7.3 13 13 A K T 3< S+ 0 0 143 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.283 106.5 56.5 -80.4 15.8 -3.3 3.3 -10.4 14 14 A K T < S+ 0 0 139 -3,-2.2 -1,-0.3 -5,-0.1 -2,-0.2 0.043 93.8 64.1-133.1 17.3 -5.2 6.6 -9.9 15 15 A H < + 0 0 34 -3,-1.4 2,-2.1 2,-0.1 3,-0.5 0.418 66.7 111.3-118.2 -1.9 -4.2 7.4 -6.3 16 16 A N + 0 0 73 -4,-0.4 5,-0.1 1,-0.2 -3,-0.0 -0.443 47.8 97.9 -72.4 78.4 -0.4 7.7 -7.0 17 17 A H S S- 0 0 131 -2,-2.1 -1,-0.2 -3,-0.0 -2,-0.1 0.613 94.9 -92.9-125.6 -65.8 -0.1 11.5 -6.4 18 18 A S S > S+ 0 0 73 -3,-0.5 3,-0.6 0, 0.0 18,-0.1 -0.066 117.4 55.0 172.6 -42.5 1.1 12.3 -2.9 19 19 A K T 3 S+ 0 0 177 1,-0.2 15,-0.1 15,-0.0 -3,-0.1 0.140 117.0 38.8 -97.0 15.8 -2.1 12.7 -0.7 20 20 A S T 3 S+ 0 0 36 -5,-0.3 2,-0.8 13,-0.1 -1,-0.2 0.001 73.6 170.0-151.2 26.1 -3.3 9.3 -1.8 21 21 A T < + 0 0 1 -3,-0.6 11,-2.3 -5,-0.1 12,-0.4 -0.280 19.1 166.0 -47.5 92.8 -0.1 7.2 -1.8 22 22 A W E +B 31 0B 13 -2,-0.8 29,-1.8 -10,-0.2 30,-0.3 -0.487 12.5 176.5-102.0 176.7 -1.6 3.8 -2.2 23 23 A L E -B 30 0B 2 7,-1.4 7,-2.5 27,-0.3 2,-0.6 -0.941 32.5-110.6-172.0 166.6 -0.0 0.4 -3.1 24 24 A I E +Bc 29 53B 23 28,-2.7 30,-0.8 25,-0.4 31,-0.7 -0.943 32.0 174.3-112.7 108.3 -0.8 -3.3 -3.5 25 25 A L S S- 0 0 14 3,-1.0 28,-0.1 -2,-0.6 -2,-0.0 -0.912 75.5 -21.0-115.2 100.8 0.7 -5.5 -0.8 26 26 A H S S- 0 0 97 -2,-0.6 -1,-0.2 1,-0.2 3,-0.1 0.998 124.8 -46.8 61.7 78.9 -0.5 -9.0 -1.3 27 27 A H S S+ 0 0 133 -3,-0.1 52,-0.6 1,-0.1 2,-0.3 0.787 118.2 106.3 32.6 46.5 -3.8 -8.6 -3.3 28 28 A K E - D 0 78B 75 50,-0.2 -3,-1.0 -22,-0.0 2,-0.6 -0.959 70.0-123.6-147.8 155.9 -4.9 -5.8 -0.9 29 29 A V E -BD 24 77B 0 48,-1.9 47,-2.4 -2,-0.3 48,-1.4 -0.927 31.1-177.4-115.6 115.0 -5.1 -2.1 -1.2 30 30 A Y E -BD 23 75B 15 -7,-2.5 -7,-1.4 -2,-0.6 2,-0.4 -0.741 16.1-155.1-108.0 161.8 -3.2 -0.1 1.4 31 31 A D E +B 22 0B 28 43,-1.8 -9,-0.2 -2,-0.3 3,-0.1 -0.972 20.2 165.0-139.5 111.4 -2.9 3.7 1.9 32 32 A L >> + 0 0 11 -11,-2.3 4,-1.0 -2,-0.4 3,-0.5 -0.020 39.6 119.4-118.0 27.9 0.2 5.0 3.7 33 33 A T G >4 S+ 0 0 25 -12,-0.4 3,-1.1 1,-0.3 4,-0.4 0.965 84.7 38.2 -53.0 -57.1 -0.4 8.6 2.7 34 34 A K G 34 S+ 0 0 154 1,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.533 119.4 52.5 -74.8 -4.0 -0.6 9.7 6.4 35 35 A F G <> S+ 0 0 31 -3,-0.5 4,-0.8 2,-0.1 -1,-0.2 0.481 80.5 94.6-104.8 -8.1 2.2 7.2 7.0 36 36 A L T X< S+ 0 0 9 -3,-1.1 3,-0.9 -4,-1.0 6,-0.1 0.956 104.8 20.3 -50.2 -64.8 4.6 8.5 4.4 37 37 A E T 34 S+ 0 0 152 -4,-0.4 -1,-0.3 1,-0.2 4,-0.1 0.629 122.2 63.7 -77.4 -15.3 6.5 10.7 6.8 38 38 A E T 34 S+ 0 0 118 -6,-0.2 -1,-0.2 -5,-0.2 -2,-0.2 0.384 81.7 103.9 -89.0 3.2 5.2 8.7 9.7 39 39 A H S << S- 0 0 37 -3,-0.9 2,-1.4 -4,-0.8 -7,-0.0 -0.767 77.4-127.4 -90.3 123.8 7.1 5.6 8.4 40 40 A P S S+ 0 0 115 0, 0.0 -2,-0.1 0, 0.0 3,-0.1 -0.574 96.7 27.4 -71.8 93.2 10.3 4.6 10.2 41 41 A G S S- 0 0 80 -2,-1.4 2,-0.2 -4,-0.1 -4,-0.0 -0.455 120.7 -41.3 158.6 -71.0 12.7 4.5 7.3 42 42 A G - 0 0 32 -6,-0.1 -3,-0.4 1,-0.1 -1,-0.1 -0.708 30.5-138.7-155.3-151.9 11.6 6.7 4.4 43 43 A E S >> S+ 0 0 78 -2,-0.2 4,-0.9 -5,-0.1 3,-0.7 0.248 93.4 67.3-154.4 -45.7 8.5 7.9 2.4 44 44 A E H >> S+ 0 0 109 1,-0.3 4,-1.9 2,-0.2 3,-0.6 0.858 93.4 63.8 -65.1 -32.9 9.8 7.9 -1.2 45 45 A V H 3> S+ 0 0 68 1,-0.3 4,-0.7 2,-0.2 3,-0.3 0.920 98.4 53.7 -56.7 -39.5 10.0 4.2 -1.0 46 46 A L H <4 S+ 0 0 16 -3,-0.7 3,-0.3 1,-0.2 -1,-0.3 0.843 110.7 48.0 -68.4 -20.8 6.3 4.1 -0.6 47 47 A R H X< S+ 0 0 154 -4,-0.9 3,-1.2 -3,-0.6 -2,-0.2 0.761 97.5 68.0 -80.7 -26.5 6.1 6.2 -3.8 48 48 A E H 3< S+ 0 0 139 -4,-1.9 -1,-0.2 -3,-0.3 -2,-0.2 0.725 116.4 28.0 -67.6 -18.1 8.5 4.0 -5.8 49 49 A Q T >< S+ 0 0 46 -4,-0.7 3,-2.3 -3,-0.3 -25,-0.4 0.069 89.6 151.5-125.9 14.0 5.7 1.3 -5.6 50 50 A A T < S- 0 0 21 -3,-1.2 -27,-0.3 1,-0.3 3,-0.1 -0.276 79.5 -0.8 -53.1 135.7 2.8 3.7 -5.4 51 51 A G T 3 S+ 0 0 8 -29,-1.8 -1,-0.3 1,-0.2 -28,-0.2 0.702 129.1 87.5 51.8 23.7 -0.4 2.2 -6.9 52 52 A G S < S- 0 0 20 -3,-2.3 -28,-2.7 -30,-0.3 2,-1.3 -0.720 95.2 -66.3-143.3 179.3 1.9 -0.8 -7.6 53 53 A D B > +c 24 0B 119 -2,-0.2 3,-0.6 -30,-0.2 4,-0.2 -0.607 45.5 163.9 -85.0 91.9 3.3 -4.0 -6.2 54 54 A A T >> + 0 0 10 -2,-1.3 4,-2.4 -30,-0.8 3,-0.8 0.459 51.6 101.2 -84.5 -0.5 5.5 -3.0 -3.2 55 55 A T H 3> S+ 0 0 31 -31,-0.7 4,-2.4 1,-0.3 5,-0.3 0.854 72.2 62.3 -54.3 -39.0 5.4 -6.7 -2.0 56 56 A E H <> S+ 0 0 144 -3,-0.6 4,-2.3 2,-0.2 -1,-0.3 0.911 111.6 38.4 -51.4 -46.1 8.8 -7.3 -3.5 57 57 A N H <> S+ 0 0 65 -3,-0.8 4,-2.4 -4,-0.2 5,-0.4 0.966 111.6 55.6 -71.1 -57.9 10.2 -4.6 -1.0 58 58 A F H X>S+ 0 0 28 -4,-2.4 5,-1.6 1,-0.2 4,-1.2 0.835 119.3 35.6 -39.4 -42.7 8.0 -5.5 2.0 59 59 A E H <5S+ 0 0 124 -4,-2.4 -1,-0.2 2,-0.2 -2,-0.2 0.849 108.2 63.3 -84.1 -39.1 9.4 -9.1 1.7 60 60 A D H <5S+ 0 0 132 -4,-2.3 -2,-0.2 -5,-0.3 -3,-0.2 0.889 115.4 35.6 -52.3 -42.8 13.0 -8.3 0.6 61 61 A V H <5S- 0 0 93 -4,-2.4 -1,-0.2 -5,-0.1 -2,-0.2 0.834 102.7-139.4 -83.0 -33.8 13.3 -6.6 3.9 62 62 A G T <5 - 0 0 45 -4,-1.2 -3,-0.2 -5,-0.4 -4,-0.1 0.990 31.0-131.3 75.8 56.8 11.2 -9.1 5.7 63 63 A H < - 0 0 59 -5,-1.6 -5,-0.0 1,-0.1 -1,-0.0 0.129 13.9-102.5 -50.3 158.8 9.4 -6.5 7.8 64 64 A S > - 0 0 86 1,-0.1 4,-1.5 3,-0.0 -1,-0.1 -0.134 31.8-107.3 -71.1 171.6 8.9 -6.6 11.6 65 65 A T H > S+ 0 0 110 2,-0.2 4,-1.5 1,-0.2 -1,-0.1 0.898 116.5 61.4 -73.8 -38.0 5.6 -7.5 13.3 66 66 A D H > S+ 0 0 118 1,-0.3 4,-1.7 2,-0.2 -1,-0.2 0.860 107.8 47.6 -58.5 -32.4 4.8 -3.9 14.4 67 67 A A H > S+ 0 0 30 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.890 103.0 58.8 -74.6 -38.9 4.8 -3.1 10.6 68 68 A R H X S+ 0 0 139 -4,-1.5 4,-0.6 1,-0.2 -2,-0.2 0.830 107.6 52.8 -56.3 -28.1 2.6 -6.1 9.9 69 69 A E H >X S+ 0 0 134 -4,-1.5 3,-1.3 2,-0.2 4,-0.8 0.935 101.8 52.0 -74.5 -52.8 0.1 -4.4 12.3 70 70 A L H >X S+ 0 0 63 -4,-1.7 3,-0.9 1,-0.3 4,-0.5 0.874 99.8 69.1 -58.0 -30.1 -0.1 -0.9 10.7 71 71 A S H >X S+ 0 0 16 -4,-1.8 3,-1.4 1,-0.3 4,-1.4 0.908 95.1 54.6 -44.4 -45.5 -0.9 -2.9 7.5 72 72 A K H << S+ 0 0 159 -3,-1.3 -1,-0.3 -4,-0.6 -2,-0.2 0.829 112.1 41.9 -65.0 -31.3 -4.2 -3.7 9.2 73 73 A T H << S+ 0 0 63 -3,-0.9 -1,-0.3 -4,-0.8 -2,-0.2 0.302 111.8 57.7 -95.2 4.9 -4.9 0.0 9.8 74 74 A F H << S+ 0 0 25 -3,-1.4 -43,-1.8 -4,-0.5 -2,-0.2 0.551 76.1 106.9-108.5 -18.9 -3.6 1.0 6.3 75 75 A I E < +D 30 0B 20 -4,-1.4 -72,-0.7 -74,-0.3 -45,-0.3 -0.467 32.8 165.4 -59.5 131.7 -6.0 -1.2 4.3 76 76 A I E - 0 0 17 -47,-2.4 -71,-1.7 1,-0.3 2,-0.3 0.363 66.6 -21.0-120.9 -6.5 -8.6 1.0 2.6 77 77 A G E -D 29 0B 0 -48,-1.4 -48,-1.9 -73,-0.3 2,-0.3 -0.957 61.5-114.7-177.0-174.4 -9.9 -1.7 0.1 78 78 A E E -D 28 0B 64 -2,-0.3 -71,-2.0 -50,-0.2 -50,-0.2 -0.962 44.7 -80.8-141.7 158.9 -9.1 -4.9 -1.6 79 79 A L B -a 7 0A 19 -52,-0.6 -71,-0.2 -2,-0.3 5,-0.1 -0.411 67.0 -90.3 -57.1 129.9 -8.5 -5.9 -5.3 80 80 A H > - 0 0 57 -73,-1.7 3,-1.5 3,-0.1 -1,-0.1 -0.060 28.2-127.3 -43.7 144.1 -12.0 -6.3 -6.9 81 81 A P G > S+ 0 0 56 0, 0.0 3,-0.6 0, 0.0 4,-0.5 0.771 112.8 55.1 -73.3 -21.7 -13.3 -9.9 -6.6 82 82 A D G 3 >S+ 0 0 87 1,-0.2 5,-0.9 2,-0.1 6,-0.4 0.557 116.2 40.9 -77.7 -7.6 -14.0 -9.9 -10.4 83 83 A D G < 5S+ 0 0 37 -3,-1.5 -1,-0.2 3,-0.2 -3,-0.1 0.034 97.0 76.3-131.2 19.5 -10.2 -9.0 -10.7 84 84 A R T < 5S+ 0 0 148 -3,-0.6 -2,-0.1 -5,-0.1 -4,-0.1 0.771 114.1 13.1 -99.0 -33.1 -8.6 -11.2 -8.0 85 85 A S T 5S+ 0 0 94 -4,-0.5 -2,-0.1 0, 0.0 -1,-0.1 -0.174 139.6 24.5-138.5 34.1 -8.8 -14.6 -9.8 86 86 A K T 5 + 0 0 154 3,-0.0 -3,-0.2 0, 0.0 -4,-0.1 0.133 52.7 180.0-155.2 -70.1 -9.5 -13.6 -13.4 87 87 A L < + 0 0 97 -5,-0.9 2,-0.1 1,-0.1 -4,-0.1 0.808 63.2 95.8 55.2 32.3 -8.6 -10.1 -14.6 88 88 A S + 0 0 100 -6,-0.4 -1,-0.1 2,-0.1 -5,-0.0 -0.593 48.2 101.5-154.3 84.0 -10.1 -11.0 -18.0 89 89 A K - 0 0 118 -2,-0.1 -3,-0.0 -6,-0.0 -7,-0.0 -0.969 58.1-115.6-157.1 156.7 -13.7 -10.1 -18.8 90 90 A P - 0 0 115 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.001 15.8-142.1 -76.2-169.5 -15.6 -7.4 -20.9 91 91 A M - 0 0 148 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.683 22.4-170.6-118.9 -61.8 -17.9 -4.8 -19.4 92 92 A E - 0 0 154 1,-0.1 2,-0.4 2,-0.0 0, 0.0 0.580 8.7-146.0 64.7 139.7 -20.9 -4.3 -21.7 93 93 A T 0 0 101 1,-0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.971 360.0 360.0-143.4 129.0 -23.4 -1.4 -21.2 94 94 A L 0 0 226 -2,-0.4 -2,-0.0 0, 0.0 -1,-0.0 0.478 360.0 360.0 59.3 360.0 -27.2 -1.4 -21.9