==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 27-APR-06 2DO7 . COMPND 2 MOLECULE: CULLIN-4B; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8789.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 59.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 7.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 37.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 801 A G 0 0 137 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0-138.4 -7.9 -5.5 17.7 2 802 A S - 0 0 110 1,-0.1 7,-0.0 0, 0.0 3,-0.0 -0.895 360.0-101.9-132.8 162.2 -11.3 -3.7 17.3 3 803 A S - 0 0 97 -2,-0.3 -1,-0.1 1,-0.1 6,-0.0 0.899 66.1-123.2 -47.3 -48.0 -13.0 -0.7 18.9 4 804 A G S S+ 0 0 42 2,-0.1 3,-0.1 -3,-0.0 -1,-0.1 0.377 74.2 3.7 104.2 123.1 -15.1 -3.0 21.0 5 805 A S S S+ 0 0 145 1,-0.2 2,-0.3 2,-0.1 -2,-0.0 0.847 96.4 147.4 39.3 43.4 -18.9 -3.3 21.3 6 806 A S - 0 0 72 1,-0.1 -1,-0.2 3,-0.0 3,-0.1 -0.750 46.6-152.7-107.9 155.5 -19.0 -0.7 18.5 7 807 A G S S+ 0 0 86 1,-0.3 2,-0.4 -2,-0.3 -1,-0.1 0.929 79.1 21.7 -89.4 -57.7 -21.6 -0.3 15.8 8 808 A I - 0 0 143 2,-0.0 2,-0.5 0, 0.0 -1,-0.3 -0.923 60.8-160.9-117.6 140.8 -19.7 1.5 13.0 9 809 A Q + 0 0 148 -2,-0.4 2,-0.2 -3,-0.1 -3,-0.0 -0.876 44.5 108.2-123.5 98.8 -16.0 1.5 12.4 10 810 A M + 0 0 133 -2,-0.5 2,-0.3 2,-0.0 -2,-0.0 -0.716 30.1 168.8-172.4 116.3 -14.8 4.3 10.1 11 811 A K + 0 0 190 -2,-0.2 2,-0.2 2,-0.0 -2,-0.0 -0.951 2.4 162.0-133.1 152.9 -12.9 7.5 10.8 12 812 A E + 0 0 141 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.792 4.5 171.4-172.3 125.0 -11.1 10.2 8.6 13 813 A T - 0 0 118 -2,-0.2 2,-0.4 2,-0.0 -2,-0.0 -0.975 16.0-151.7-139.2 152.4 -10.0 13.7 9.2 14 814 A V + 0 0 128 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.987 14.5 178.2-129.7 126.8 -7.9 16.3 7.4 15 815 A E - 0 0 132 -2,-0.4 2,-0.5 2,-0.1 -2,-0.0 -0.981 14.6-163.6-129.7 139.6 -5.8 19.1 8.9 16 816 A E + 0 0 179 -2,-0.4 2,-0.3 0, 0.0 3,-0.1 -0.772 41.4 122.1-124.1 86.2 -3.6 21.7 7.3 17 817 A Q - 0 0 158 -2,-0.5 -2,-0.1 2,-0.2 0, 0.0 -0.964 61.7-131.9-149.4 128.2 -1.3 23.3 9.9 18 818 A A S S+ 0 0 109 -2,-0.3 -1,-0.1 2,-0.1 0, 0.0 0.858 84.0 97.5 -42.4 -43.4 2.5 23.5 10.0 19 819 A S S S- 0 0 101 1,-0.1 2,-0.4 -3,-0.1 -2,-0.2 0.124 77.3-122.1 -42.7 164.5 2.3 22.3 13.6 20 820 A T - 0 0 116 2,-0.0 -1,-0.1 4,-0.0 -2,-0.1 -0.970 18.9-149.2-122.1 129.1 2.9 18.6 14.3 21 821 A T - 0 0 81 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.134 18.2-126.2 -82.7-177.0 0.4 16.3 16.0 22 822 A E S >> S+ 0 0 156 2,-0.1 3,-1.4 1,-0.1 4,-0.5 0.717 103.9 61.1-101.9 -30.2 1.1 13.3 18.1 23 823 A R H >> S+ 0 0 200 1,-0.3 4,-2.1 2,-0.2 3,-0.7 0.788 92.2 68.3 -67.6 -27.7 -1.0 10.7 16.2 24 824 A V H 3> S+ 0 0 42 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.588 90.6 66.1 -67.8 -8.8 1.1 11.3 13.1 25 825 A F H <> S+ 0 0 133 -3,-1.4 4,-1.3 2,-0.2 -1,-0.2 0.873 107.6 35.0 -79.8 -40.1 3.9 9.6 15.1 26 826 A Q H -A 90 0A 31 -2,-0.3 4,-1.9 43,-0.2 43,-0.2 -0.367 32.7 -99.9 -95.7 177.5 17.6 -5.8 -2.0 48 848 A H H > S+ 0 0 61 41,-1.3 4,-2.8 2,-0.2 5,-0.4 0.965 121.3 47.0 -61.7 -55.0 17.9 -2.4 -0.4 49 849 A N H > S+ 0 0 100 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.941 114.5 46.6 -52.3 -53.8 17.5 -0.3 -3.5 50 850 A L H > S+ 0 0 91 2,-0.2 4,-2.0 3,-0.2 -1,-0.2 0.839 117.0 47.5 -58.7 -33.8 14.4 -2.4 -4.6 51 851 A L H X S+ 0 0 0 -4,-1.9 4,-2.8 2,-0.2 5,-0.3 0.996 111.4 44.0 -70.6 -69.7 13.1 -2.0 -1.1 52 852 A V H X S+ 0 0 23 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.832 116.5 52.5 -44.3 -37.4 13.6 1.7 -0.4 53 853 A S H X S+ 0 0 74 -4,-2.2 4,-2.0 -5,-0.4 -1,-0.2 0.970 111.6 42.3 -65.4 -55.7 12.2 2.3 -3.9 54 854 A E H X S+ 0 0 54 -4,-2.0 4,-1.7 -5,-0.2 5,-0.2 0.953 113.5 52.7 -56.2 -54.0 9.0 0.2 -3.4 55 855 A V H >X S+ 0 0 0 -4,-2.8 4,-1.7 1,-0.2 3,-0.8 0.927 107.8 51.1 -47.6 -54.5 8.4 1.6 0.1 56 856 A Y H 3< S+ 0 0 98 -4,-2.0 3,-0.3 -5,-0.3 -1,-0.2 0.897 106.9 54.4 -51.6 -44.7 8.6 5.2 -1.2 57 857 A N H 3< S+ 0 0 128 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.833 110.0 47.2 -59.8 -33.0 6.1 4.3 -3.9 58 858 A Q H << S+ 0 0 115 -4,-1.7 2,-0.6 -3,-0.8 -1,-0.3 0.733 107.5 65.6 -80.2 -24.1 3.7 3.1 -1.3 59 859 A L < - 0 0 9 -4,-1.7 -1,-0.1 -3,-0.3 4,-0.1 -0.894 62.4-164.8-105.6 117.7 4.3 6.2 0.9 60 860 A K S S+ 0 0 217 -2,-0.6 -1,-0.1 2,-0.1 -3,-0.1 0.281 74.5 72.2 -80.7 12.1 3.1 9.5 -0.6 61 861 A F S S- 0 0 55 -5,-0.1 2,-0.2 0, 0.0 -2,-0.1 -0.967 90.3-104.8-131.2 146.0 5.2 11.2 2.0 62 862 A P - 0 0 123 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 -0.468 35.1-154.5 -69.8 132.0 9.0 11.6 2.5 63 863 A V - 0 0 18 -2,-0.2 -7,-0.0 -4,-0.1 -4,-0.0 -0.837 16.0-113.4-110.7 147.4 10.6 9.4 5.1 64 864 A K > - 0 0 116 -2,-0.3 4,-2.3 1,-0.1 5,-0.2 -0.364 18.4-126.6 -75.1 155.3 13.8 10.1 7.1 65 865 A P H > S+ 0 0 99 0, 0.0 4,-2.0 0, 0.0 5,-0.3 0.840 108.7 53.8 -69.8 -34.8 16.9 7.9 6.6 66 866 A A H > S+ 0 0 59 2,-0.2 4,-1.9 3,-0.2 5,-0.1 0.920 114.0 40.4 -66.7 -45.2 17.2 7.2 10.3 67 867 A D H > S+ 0 0 58 2,-0.2 4,-3.0 3,-0.2 5,-0.2 0.960 116.2 49.1 -68.4 -53.3 13.6 6.0 10.6 68 868 A L H X S+ 0 0 6 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.962 115.2 42.9 -50.2 -63.0 13.6 4.0 7.3 69 869 A K H X S+ 0 0 106 -4,-2.0 4,-2.1 1,-0.2 5,-0.2 0.924 113.5 53.1 -50.2 -51.1 16.9 2.2 8.0 70 870 A K H X S+ 0 0 119 -4,-1.9 4,-2.3 -5,-0.3 -1,-0.2 0.911 106.6 53.1 -52.0 -47.1 15.9 1.6 11.6 71 871 A R H X S+ 0 0 46 -4,-3.0 4,-2.3 2,-0.2 -1,-0.2 0.925 111.4 46.4 -55.3 -48.4 12.6 0.0 10.5 72 872 A I H X S+ 0 0 3 -4,-2.1 4,-2.5 2,-0.2 5,-0.2 0.993 111.6 47.4 -57.9 -69.7 14.4 -2.4 8.2 73 873 A E H X S+ 0 0 95 -4,-2.1 4,-2.0 1,-0.2 5,-0.3 0.890 114.0 49.4 -37.0 -60.1 17.1 -3.6 10.6 74 874 A S H >X S+ 0 0 44 -4,-2.3 4,-1.6 -5,-0.2 3,-0.9 0.949 109.2 50.1 -46.2 -64.6 14.5 -4.2 13.3 75 875 A L H ><>S+ 0 0 3 -4,-2.3 5,-0.9 1,-0.3 3,-0.8 0.886 108.0 55.1 -42.0 -49.9 12.2 -6.1 11.1 76 876 A I H ><5S+ 0 0 21 -4,-2.5 3,-0.6 1,-0.3 4,-0.5 0.897 112.6 41.5 -52.5 -44.4 15.1 -8.3 10.0 77 877 A D H <<5S+ 0 0 140 -4,-2.0 -1,-0.3 -3,-0.9 -2,-0.2 0.611 100.4 75.5 -79.2 -12.7 15.8 -9.1 13.6 78 878 A R T <<5S- 0 0 148 -4,-1.6 -1,-0.2 -3,-0.8 -2,-0.2 0.053 121.5-100.2 -86.9 26.3 12.1 -9.5 14.2 79 879 A D T < 5S+ 0 0 131 -3,-0.6 -3,-0.2 2,-0.2 -2,-0.2 0.926 101.9 102.6 56.0 48.2 12.2 -12.9 12.5 80 880 A Y S - 0 0 63 -3,-0.2 3,-1.6 3,-0.1 -3,-0.6 -0.999 52.9-129.6-144.7 144.0 25.9 -9.4 1.2 88 888 A P T 3 S+ 0 0 73 0, 0.0 -3,-0.1 0, 0.0 -2,-0.0 0.448 98.9 82.6 -69.7 1.4 23.6 -7.6 3.7 89 889 A N T 3 S+ 0 0 95 -5,-0.2 -41,-1.3 -42,-0.1 2,-0.4 0.708 84.0 65.9 -78.4 -20.9 22.2 -5.8 0.7 90 890 A Q E < -A 47 0A 57 -3,-1.6 -6,-2.4 -43,-0.2 2,-0.4 -0.885 67.6-166.0-107.4 132.6 19.9 -8.7 -0.0 91 891 A Y E -AB 46 83A 17 -45,-3.0 -45,-2.2 -2,-0.4 2,-0.3 -0.959 4.4-154.9-120.8 133.9 17.1 -9.7 2.3 92 892 A N E -AB 45 82A 25 -10,-2.5 -10,-1.6 -2,-0.4 2,-0.3 -0.698 23.6-107.4-104.6 157.7 15.1 -13.0 2.2 93 893 A Y E + B 0 81A 64 -49,-2.6 -12,-0.2 -2,-0.3 -13,-0.1 -0.668 45.2 151.7 -86.4 135.4 11.6 -13.7 3.4 94 894 A I + 0 0 67 -14,-1.7 -13,-0.2 -2,-0.3 -1,-0.2 0.567 28.4 123.0-129.9 -33.8 11.2 -15.9 6.5 95 895 A A - 0 0 18 -15,-1.1 2,-0.5 1,-0.1 -15,-0.1 0.074 57.0-132.8 -34.1 141.0 8.0 -14.8 8.1 96 896 A S + 0 0 128 2,-0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.913 48.4 114.4-109.5 126.2 5.6 -17.7 8.6 97 897 A G - 0 0 50 -2,-0.5 0, 0.0 2,-0.0 0, 0.0 -0.845 56.5-100.1 175.9 146.2 1.9 -17.3 7.5 98 898 A P - 0 0 140 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.164 35.0-164.6 -69.8 166.8 -0.7 -18.6 5.1 99 899 A S - 0 0 106 1,-0.1 -2,-0.0 2,-0.0 0, 0.0 -0.980 24.0-166.4-151.6 160.2 -1.8 -16.7 2.0 100 900 A S 0 0 138 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.721 360.0 360.0-115.3 -46.9 -4.6 -16.7 -0.6 101 901 A G 0 0 115 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.422 360.0 360.0-150.0 360.0 -3.4 -14.5 -3.5