==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 28-APR-06 2DOD . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6757.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 59.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 43.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 644 A G 0 0 118 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-105.6 -10.2 -23.3 9.2 2 645 A S + 0 0 142 1,-0.2 2,-0.4 2,-0.0 4,-0.1 0.863 360.0 167.9 44.9 42.3 -7.5 -22.6 6.6 3 646 A S + 0 0 118 1,-0.1 -1,-0.2 2,-0.1 0, 0.0 -0.696 43.8 24.1 -89.7 136.9 -7.1 -26.3 6.3 4 647 A G S S- 0 0 60 -2,-0.4 -1,-0.1 -3,-0.1 -2,-0.0 0.860 97.3 -92.0 77.0 101.6 -5.1 -27.8 3.4 5 648 A S - 0 0 111 1,-0.1 -2,-0.1 2,-0.1 -1,-0.0 -0.163 32.0-136.8 -45.1 120.0 -2.5 -25.4 1.8 6 649 A S - 0 0 140 1,-0.1 -1,-0.1 -4,-0.1 -3,-0.0 0.910 65.4 -67.8 -46.7 -50.7 -4.3 -23.6 -1.0 7 650 A G - 0 0 55 3,-0.0 -1,-0.1 0, 0.0 -2,-0.1 0.334 50.1-149.5 158.2 46.5 -1.3 -24.1 -3.2 8 651 A A - 0 0 57 1,-0.2 6,-0.1 3,-0.1 -3,-0.0 -0.054 8.6-147.9 -36.9 112.8 1.8 -22.2 -2.1 9 652 A R S S+ 0 0 164 4,-0.0 -1,-0.2 2,-0.0 2,-0.2 0.826 82.1 47.0 -56.9 -32.6 3.6 -21.5 -5.4 10 653 A E S S- 0 0 92 3,-0.6 -3,-0.0 1,-0.1 0, 0.0 -0.476 86.0-120.4-104.0 177.0 6.8 -21.6 -3.5 11 654 A R S S- 0 0 243 -2,-0.2 -1,-0.1 1,-0.1 -3,-0.1 0.967 102.7 -6.2 -80.9 -64.0 8.2 -24.1 -0.9 12 655 A A S S+ 0 0 99 2,-0.1 2,-0.5 1,-0.0 -1,-0.1 0.015 114.1 97.3-122.0 25.2 8.8 -21.9 2.2 13 656 A I S S- 0 0 88 -5,-0.0 -3,-0.6 0, 0.0 -4,-0.0 -0.945 73.7-125.4-121.7 112.7 8.0 -18.5 0.6 14 657 A V - 0 0 72 -2,-0.5 -3,-0.1 1,-0.1 -2,-0.1 -0.146 34.3-105.8 -52.5 144.2 4.5 -17.1 1.1 15 658 A P > - 0 0 41 0, 0.0 4,-2.1 0, 0.0 3,-0.3 -0.207 26.9-106.5 -69.7 163.1 2.7 -16.1 -2.2 16 659 A L H > S+ 0 0 65 1,-0.2 4,-2.9 2,-0.2 5,-0.3 0.922 122.0 53.1 -56.0 -47.3 2.3 -12.5 -3.4 17 660 A E H > S+ 0 0 142 2,-0.2 4,-1.5 3,-0.2 -1,-0.2 0.836 110.3 51.0 -58.0 -33.7 -1.4 -12.6 -2.5 18 661 A A H > S+ 0 0 33 -3,-0.3 4,-1.9 2,-0.2 3,-0.3 0.997 115.9 35.3 -67.4 -67.2 -0.4 -13.7 1.0 19 662 A R H X S+ 0 0 47 -4,-2.1 4,-2.1 1,-0.2 5,-0.2 0.915 117.8 54.5 -53.8 -47.2 2.2 -11.1 1.9 20 663 A M H X S+ 0 0 33 -4,-2.9 4,-2.4 -5,-0.3 -1,-0.2 0.886 106.0 53.1 -55.0 -41.4 0.2 -8.5 -0.0 21 664 A K H X S+ 0 0 142 -4,-1.5 4,-2.2 -5,-0.3 -1,-0.2 0.908 107.1 52.1 -61.6 -43.5 -2.9 -9.3 2.0 22 665 A Q H X S+ 0 0 68 -4,-1.9 4,-2.0 2,-0.2 5,-0.2 0.969 111.1 45.1 -57.5 -57.9 -1.0 -8.8 5.3 23 666 A F H X S+ 0 0 1 -4,-2.1 4,-2.8 1,-0.2 -2,-0.2 0.936 113.7 49.8 -52.0 -52.5 0.4 -5.4 4.4 24 667 A K H X S+ 0 0 80 -4,-2.4 4,-2.0 1,-0.2 5,-0.3 0.860 106.8 57.9 -55.9 -37.2 -3.0 -4.3 3.1 25 668 A D H X S+ 0 0 86 -4,-2.2 4,-2.7 1,-0.2 -1,-0.2 0.950 111.5 38.8 -58.9 -52.2 -4.6 -5.6 6.4 26 669 A M H X S+ 0 0 0 -4,-2.0 4,-2.4 2,-0.2 5,-0.4 0.869 109.1 63.8 -66.9 -37.5 -2.4 -3.3 8.6 27 670 A L H <>S+ 0 0 0 -4,-2.8 5,-2.5 -5,-0.2 4,-0.4 0.921 115.0 30.5 -52.3 -48.9 -2.7 -0.5 6.1 28 671 A L H <5S+ 0 0 98 -4,-2.0 3,-0.3 3,-0.2 -2,-0.2 0.913 123.5 48.9 -77.5 -45.8 -6.4 -0.3 6.7 29 672 A E H <5S+ 0 0 140 -4,-2.7 -3,-0.2 -5,-0.3 -2,-0.2 0.987 107.2 51.9 -57.1 -66.0 -6.4 -1.5 10.3 30 673 A R T <5S- 0 0 135 -4,-2.4 -1,-0.2 -5,-0.1 -3,-0.2 0.753 119.2-115.0 -43.8 -25.7 -3.6 0.8 11.6 31 674 A G T 5 - 0 0 48 -5,-0.4 2,-1.1 -4,-0.4 -3,-0.2 0.878 37.1-167.1 89.2 43.8 -5.8 3.5 10.0 32 675 A V < - 0 0 4 -5,-2.5 -1,-0.2 -6,-0.3 4,-0.1 -0.505 21.4-132.9 -68.1 97.9 -3.5 4.8 7.3 33 676 A S - 0 0 59 -2,-1.1 3,-0.4 1,-0.1 8,-0.1 -0.145 5.8-146.2 -51.4 143.9 -5.2 8.0 6.2 34 677 A A S S+ 0 0 15 1,-0.2 2,-1.3 36,-0.1 -1,-0.1 0.883 94.6 59.1 -80.9 -42.1 -5.6 8.4 2.5 35 678 A F S S+ 0 0 150 35,-0.1 2,-0.2 2,-0.0 -1,-0.2 -0.229 96.8 90.3 -82.9 47.7 -5.2 12.2 2.4 36 679 A S S S- 0 0 52 -2,-1.3 2,-0.3 -3,-0.4 -4,-0.0 -0.725 79.0 -93.4-131.9-178.6 -1.7 11.9 3.9 37 680 A T > - 0 0 50 -2,-0.2 4,-1.8 1,-0.1 5,-0.3 -0.724 26.8-122.0-101.7 151.4 1.9 11.5 2.9 38 681 A W H > S+ 0 0 54 -2,-0.3 4,-2.2 1,-0.2 5,-0.1 0.770 111.2 63.3 -59.4 -25.6 3.9 8.2 2.5 39 682 A E H > S+ 0 0 144 2,-0.2 4,-2.2 3,-0.2 5,-0.2 0.972 105.3 40.9 -63.6 -56.6 6.3 9.6 5.1 40 683 A K H > S+ 0 0 113 1,-0.2 4,-1.8 2,-0.2 -2,-0.2 0.970 119.8 43.5 -56.1 -59.0 3.8 9.8 7.9 41 684 A E H X S+ 0 0 3 -4,-1.8 4,-1.5 1,-0.2 -1,-0.2 0.881 109.5 60.7 -54.9 -40.6 2.1 6.5 7.1 42 685 A L H >X S+ 0 0 45 -4,-2.2 3,-1.2 -5,-0.3 4,-0.7 0.959 107.2 41.9 -51.8 -59.4 5.6 5.0 6.6 43 686 A H H 3X S+ 0 0 93 -4,-2.2 4,-0.8 1,-0.3 3,-0.3 0.808 109.9 61.0 -59.2 -29.8 6.7 5.7 10.2 44 687 A K H 3< S+ 0 0 93 -4,-1.8 -1,-0.3 -5,-0.2 -2,-0.2 0.792 119.7 25.9 -68.0 -28.1 3.3 4.5 11.3 45 688 A I H X< S+ 0 0 0 -4,-1.5 3,-0.7 -3,-1.2 -1,-0.2 0.221 100.8 90.1-117.9 10.4 3.9 1.1 9.8 46 689 A V H 3< S+ 0 0 72 -4,-0.7 -3,-0.2 -3,-0.3 -2,-0.1 0.864 85.1 52.7 -74.4 -37.6 7.7 1.2 10.0 47 690 A F T 3< S+ 0 0 148 -4,-0.8 -1,-0.2 -5,-0.1 -2,-0.1 0.319 92.0 106.6 -80.5 9.4 7.8 -0.3 13.5 48 691 A D < - 0 0 14 -3,-0.7 3,-0.3 1,-0.1 4,-0.2 -0.719 65.1-147.6 -93.7 139.8 5.7 -3.1 12.1 49 692 A P S > S+ 0 0 89 0, 0.0 3,-2.5 0, 0.0 -1,-0.1 0.901 98.1 59.8 -69.8 -43.1 7.2 -6.6 11.4 50 693 A R G >> S+ 0 0 70 1,-0.3 3,-1.7 2,-0.2 4,-0.7 0.734 91.3 72.5 -58.5 -21.7 4.9 -7.4 8.4 51 694 A Y G 34 S+ 0 0 32 -3,-0.3 -1,-0.3 1,-0.3 8,-0.1 0.700 93.8 53.7 -67.0 -18.7 6.5 -4.3 6.9 52 695 A L G <4 S+ 0 0 126 -3,-2.5 -1,-0.3 -4,-0.2 -2,-0.2 0.304 94.7 71.4 -97.3 7.3 9.6 -6.3 6.4 53 696 A L T <4 S+ 0 0 90 -3,-1.7 2,-0.3 -4,-0.1 -2,-0.2 0.772 94.2 55.8 -91.1 -31.2 7.7 -9.1 4.6 54 697 A L S < S- 0 0 3 -4,-0.7 -38,-0.0 1,-0.1 0, 0.0 -0.741 96.6 -94.1-104.1 152.4 7.2 -7.1 1.4 55 698 A N > - 0 0 95 -2,-0.3 4,-1.9 1,-0.1 -1,-0.1 -0.065 32.0-116.4 -57.3 161.9 9.8 -5.4 -0.8 56 699 A P H > S+ 0 0 90 0, 0.0 4,-0.9 0, 0.0 -1,-0.1 0.861 114.5 46.3 -69.7 -37.2 10.7 -1.8 -0.3 57 700 A K H > S+ 0 0 142 2,-0.2 4,-1.9 1,-0.1 3,-0.3 0.920 111.5 50.8 -72.1 -45.5 9.4 -0.7 -3.7 58 701 A E H >>S+ 0 0 25 1,-0.2 4,-3.0 2,-0.2 5,-0.5 0.950 99.2 64.7 -56.9 -53.2 6.1 -2.7 -3.5 59 702 A R H X5S+ 0 0 28 -4,-1.9 4,-1.5 1,-0.3 -1,-0.2 0.864 108.5 41.3 -36.3 -52.2 5.2 -1.2 -0.1 60 703 A K H X5S+ 0 0 70 -4,-0.9 4,-3.1 -3,-0.3 -1,-0.3 0.920 115.0 51.5 -65.4 -45.1 5.0 2.2 -1.8 61 704 A Q H X5S+ 0 0 100 -4,-1.9 4,-2.1 1,-0.2 5,-0.3 0.966 112.8 43.2 -56.4 -57.9 3.2 0.8 -4.8 62 705 A V H X5S+ 0 0 1 -4,-3.0 4,-1.7 1,-0.2 -1,-0.2 0.807 115.0 53.5 -59.0 -30.0 0.6 -1.1 -2.8 63 706 A F H X< S+ 0 0 31 -4,-2.1 3,-1.7 -3,-0.2 4,-0.4 0.903 112.1 51.5 -83.2 -46.5 -10.0 8.5 -1.8 72 715 A E H >X S+ 0 0 121 -4,-2.7 3,-1.9 1,-0.3 4,-0.6 0.894 91.9 76.0 -57.7 -42.0 -12.2 7.7 -4.7 73 716 A E G >< S+ 0 0 73 -4,-2.2 3,-0.8 1,-0.3 -1,-0.3 0.759 84.3 70.3 -41.1 -27.3 -14.6 5.8 -2.4 74 717 A E G <4 S+ 0 0 140 -3,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.945 79.8 70.4 -58.0 -51.4 -15.7 9.3 -1.4 75 718 A R G <4 S+ 0 0 245 -3,-1.9 -1,-0.2 -4,-0.4 -2,-0.2 0.811 86.8 85.1 -34.3 -41.5 -17.4 10.0 -4.7 76 719 A R S << S- 0 0 200 -3,-0.8 0, 0.0 -4,-0.6 0, 0.0 -0.356 99.4-110.1 -67.2 145.1 -20.0 7.5 -3.6 77 720 A S S S- 0 0 122 1,-0.2 -1,-0.1 2,-0.1 -3,-0.0 0.875 71.2 -96.7 -40.1 -49.6 -22.8 8.8 -1.4 78 721 A G - 0 0 22 2,-0.1 -1,-0.2 1,-0.1 -4,-0.0 -0.846 36.7 -64.8 149.2 174.9 -21.3 6.9 1.6 79 722 A P S S+ 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.527 84.6 130.4 -69.8 -4.8 -21.3 3.7 3.7 80 723 A S - 0 0 100 1,-0.0 2,-0.4 -3,-0.0 -2,-0.1 -0.203 39.1-168.6 -52.8 137.8 -24.8 4.8 4.8 81 724 A S 0 0 113 1,-0.0 -1,-0.0 0, 0.0 0, 0.0 -0.994 360.0 360.0-137.3 129.5 -27.3 2.0 4.5 82 725 A G 0 0 135 -2,-0.4 -1,-0.0 0, 0.0 0, 0.0 0.193 360.0 360.0-105.2 360.0 -31.1 2.1 4.8