==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 28-APR-06 2DOE . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7183.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 60.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 41.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 777 A G 0 0 112 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.6 -6.9 -10.4 -11.4 2 778 A S + 0 0 126 2,-0.0 2,-0.2 0, 0.0 0, 0.0 0.784 360.0 89.5-106.5 -45.8 -5.3 -12.7 -13.9 3 779 A S - 0 0 128 1,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.369 63.8-163.2 -59.1 121.4 -2.5 -14.4 -11.9 4 780 A G + 0 0 70 -2,-0.2 2,-0.3 -3,-0.0 -1,-0.0 -0.790 18.3 158.6-111.1 154.4 -3.9 -17.5 -10.2 5 781 A S - 0 0 112 -2,-0.3 2,-0.1 2,-0.0 -2,-0.0 -0.854 33.4-120.6-172.9 134.4 -2.5 -19.6 -7.4 6 782 A S S S- 0 0 110 -2,-0.3 3,-0.1 2,-0.0 -2,-0.0 -0.388 73.4 -26.8 -77.5 156.5 -3.8 -22.0 -4.8 7 783 A G S S- 0 0 63 1,-0.1 2,-0.3 -2,-0.1 -2,-0.0 0.077 94.1 -72.3 36.1-145.9 -3.5 -21.4 -1.1 8 784 A E - 0 0 163 2,-0.0 2,-0.5 9,-0.0 -1,-0.1 -0.961 37.2-159.4-148.8 126.7 -0.5 -19.3 -0.1 9 785 A K - 0 0 127 -2,-0.3 2,-0.9 -3,-0.1 8,-0.2 -0.912 5.6-157.7-110.1 129.4 3.2 -20.1 -0.2 10 786 A E + 0 0 183 -2,-0.5 2,-0.2 7,-0.1 5,-0.1 -0.643 36.0 150.8-104.6 74.4 5.7 -18.0 1.9 11 787 A D - 0 0 86 -2,-0.9 -2,-0.0 3,-0.7 0, 0.0 -0.631 52.0-126.8-102.6 162.5 9.0 -18.7 0.1 12 788 A S S S+ 0 0 101 -2,-0.2 3,-0.3 1,-0.2 -1,-0.1 0.929 103.7 66.9 -72.2 -47.3 12.1 -16.5 -0.2 13 789 A K S S+ 0 0 194 1,-0.2 2,-0.4 2,-0.1 -1,-0.2 0.868 121.1 14.3 -39.6 -48.0 12.2 -16.6 -4.0 14 790 A T + 0 0 77 1,-0.0 -3,-0.7 -5,-0.0 -1,-0.2 -0.939 60.2 167.6-138.7 114.3 9.0 -14.6 -4.1 15 791 A R > + 0 0 153 -2,-0.4 4,-1.1 -3,-0.3 -3,-0.1 -0.232 39.4 121.4-116.8 41.9 7.5 -12.8 -1.0 16 792 A G H > + 0 0 28 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.882 61.6 69.8 -71.2 -39.2 4.8 -10.8 -2.8 17 793 A E H > S+ 0 0 87 1,-0.3 4,-2.1 -8,-0.2 3,-0.5 0.927 103.9 40.7 -41.6 -64.8 2.0 -12.3 -0.8 18 794 A K H > S+ 0 0 113 1,-0.3 4,-2.3 2,-0.2 -1,-0.3 0.887 113.4 56.0 -53.6 -42.1 3.0 -10.5 2.4 19 795 A I H X S+ 0 0 37 -4,-1.1 4,-2.0 1,-0.2 -1,-0.3 0.879 106.3 51.0 -58.8 -39.4 3.8 -7.4 0.4 20 796 A K H X S+ 0 0 105 -4,-2.9 4,-2.1 -3,-0.5 -2,-0.2 0.940 108.5 50.3 -64.2 -48.9 0.3 -7.4 -1.0 21 797 A S H X S+ 0 0 66 -4,-2.1 4,-2.5 1,-0.2 -2,-0.2 0.930 110.2 50.2 -55.5 -49.3 -1.4 -7.6 2.4 22 798 A D H X S+ 0 0 58 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.912 107.5 55.3 -56.3 -45.4 0.7 -4.8 3.7 23 799 A F H X S+ 0 0 4 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.961 110.0 43.8 -52.6 -59.4 -0.2 -2.6 0.8 24 800 A F H X S+ 0 0 53 -4,-2.1 4,-3.0 1,-0.2 5,-0.4 0.941 109.3 57.8 -52.1 -53.7 -4.0 -3.0 1.3 25 801 A E H X S+ 0 0 103 -4,-2.5 4,-2.8 -5,-0.2 -1,-0.2 0.913 109.7 44.6 -42.7 -56.8 -3.7 -2.5 5.0 26 802 A L H X S+ 0 0 5 -4,-2.3 4,-1.5 2,-0.2 -2,-0.2 0.979 114.1 47.0 -53.4 -66.3 -2.1 0.9 4.5 27 803 A L H ><>S+ 0 0 0 -4,-2.1 3,-1.6 1,-0.3 5,-0.6 0.915 115.4 46.0 -41.1 -60.4 -4.5 2.2 1.8 28 804 A S H ><5S+ 0 0 35 -4,-3.0 3,-1.2 1,-0.3 4,-0.4 0.892 106.6 59.6 -52.2 -43.5 -7.5 1.1 3.8 29 805 A N H 3<5S+ 0 0 94 -4,-2.8 -1,-0.3 -5,-0.4 -2,-0.2 0.783 93.4 67.9 -57.1 -27.1 -6.0 2.6 6.9 30 806 A H T <<5S- 0 0 73 -3,-1.6 -1,-0.3 -4,-1.5 -2,-0.2 0.003 115.1-116.0 -83.6 30.6 -6.0 5.9 5.0 31 807 A H T < 5 - 0 0 157 -3,-1.2 -3,-0.2 1,-0.1 -2,-0.2 0.857 40.1-143.1 33.8 54.9 -9.8 5.8 5.2 32 808 A L < - 0 0 19 -5,-0.6 2,-0.3 -4,-0.4 -1,-0.1 -0.001 17.2-155.3 -42.7 148.6 -9.9 5.6 1.4 33 809 A D > - 0 0 104 1,-0.1 3,-2.4 -3,-0.1 39,-0.1 -0.946 30.1-110.5-133.0 153.6 -12.7 7.5 -0.3 34 810 A S T 3 S+ 0 0 79 -2,-0.3 38,-0.1 1,-0.3 -1,-0.1 0.848 121.7 55.9 -47.7 -38.3 -14.6 7.1 -3.6 35 811 A Q T 3 S+ 0 0 156 2,-0.1 -1,-0.3 37,-0.0 2,-0.1 0.052 82.8 147.9 -84.7 26.9 -12.9 10.4 -4.6 36 812 A S < - 0 0 29 -3,-2.4 2,-0.5 32,-0.1 3,-0.1 -0.379 32.9-157.6 -65.6 138.7 -9.6 8.7 -4.0 37 813 A R >> - 0 0 150 1,-0.2 4,-2.6 -2,-0.1 3,-1.1 -0.974 17.2-144.6-125.3 120.9 -6.7 9.9 -6.2 38 814 A W H 3> S+ 0 0 57 -2,-0.5 4,-3.1 1,-0.3 5,-0.3 0.900 104.1 56.8 -44.3 -51.1 -3.6 7.8 -6.8 39 815 A S H 3> S+ 0 0 80 2,-0.2 4,-1.7 1,-0.2 -1,-0.3 0.869 114.3 40.1 -50.3 -40.4 -1.5 10.9 -6.9 40 816 A K H <> S+ 0 0 147 -3,-1.1 4,-1.5 2,-0.2 5,-0.3 0.980 114.8 47.7 -73.6 -61.0 -2.8 11.8 -3.5 41 817 A V H X S+ 0 0 12 -4,-2.6 4,-2.7 1,-0.2 5,-0.2 0.820 115.3 50.2 -49.8 -33.3 -2.7 8.3 -1.9 42 818 A K H X S+ 0 0 83 -4,-3.1 4,-2.7 -5,-0.4 -1,-0.2 0.916 107.9 49.7 -72.8 -45.1 0.8 8.0 -3.3 43 819 A D H < S+ 0 0 121 -4,-1.7 4,-0.2 -5,-0.3 -2,-0.2 0.654 119.4 41.4 -68.1 -14.6 2.0 11.4 -1.9 44 820 A K H < S+ 0 0 148 -4,-1.5 3,-0.3 2,-0.1 4,-0.3 0.799 117.9 42.5 -99.4 -40.1 0.6 10.3 1.4 45 821 A V H >< S+ 0 0 0 -4,-2.7 3,-2.3 -5,-0.3 6,-0.5 0.794 97.6 77.0 -76.9 -29.6 1.7 6.6 1.5 46 822 A E T 3< S+ 0 0 79 -4,-2.7 -1,-0.2 1,-0.3 6,-0.1 0.875 85.7 62.6 -46.9 -43.2 5.1 7.5 0.1 47 823 A S T 3 S+ 0 0 95 -3,-0.3 -1,-0.3 -4,-0.2 -2,-0.2 0.806 93.8 79.5 -54.2 -30.2 6.0 8.7 3.6 48 824 A D S X S- 0 0 30 -3,-2.3 3,-0.5 -4,-0.3 4,-0.5 -0.604 78.1-141.5 -84.0 140.0 5.5 5.1 4.7 49 825 A P T >> S+ 0 0 89 0, 0.0 3,-0.8 0, 0.0 4,-0.7 0.751 96.8 71.3 -69.7 -24.8 8.3 2.6 4.1 50 826 A R H >> S+ 0 0 104 1,-0.3 3,-1.2 2,-0.2 4,-0.7 0.884 91.7 57.0 -59.2 -40.1 5.7 -0.1 3.3 51 827 A Y H <4 S+ 0 0 25 -3,-0.5 3,-0.3 -6,-0.5 -1,-0.3 0.785 100.0 59.9 -62.4 -27.2 4.9 1.7 0.0 52 828 A K H <4 S+ 0 0 132 -3,-0.8 -1,-0.3 -4,-0.5 -2,-0.2 0.740 89.5 72.7 -72.8 -23.2 8.6 1.3 -0.9 53 829 A A H << S+ 0 0 43 -3,-1.2 2,-0.5 -4,-0.7 -1,-0.2 0.916 81.7 77.9 -57.1 -46.2 8.2 -2.5 -0.6 54 830 A V < + 0 0 9 -4,-0.7 -1,-0.0 -3,-0.3 -38,-0.0 -0.551 52.9 171.0 -71.1 116.0 6.2 -2.6 -3.9 55 831 A D + 0 0 139 -2,-0.5 2,-0.4 5,-0.0 -1,-0.2 0.840 56.7 78.8 -92.2 -41.5 8.7 -2.3 -6.8 56 832 A S > - 0 0 66 1,-0.2 4,-0.9 2,-0.0 3,-0.1 -0.571 64.2-158.4 -74.1 123.4 6.3 -3.1 -9.6 57 833 A S H >> S+ 0 0 64 -2,-0.4 4,-1.8 1,-0.2 3,-1.3 0.939 89.1 63.1 -66.1 -48.7 4.1 -0.1 -10.5 58 834 A S H 3> S+ 0 0 88 1,-0.3 4,-2.8 2,-0.2 5,-0.3 0.868 100.9 54.1 -43.4 -44.3 1.4 -2.1 -12.2 59 835 A M H 3> S+ 0 0 91 3,-0.2 4,-2.6 2,-0.2 5,-0.4 0.873 108.9 49.7 -60.2 -38.2 0.8 -3.7 -8.8 60 836 A R H S- 0 0 55 -2,-0.3 3,-0.9 1,-0.2 -2,-0.0 -0.602 116.9 -21.4 96.7-158.0 -24.6 -9.5 8.6 80 856 A P T 3 S+ 0 0 130 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.431 98.8 114.1 -69.8 2.7 -24.3 -7.7 11.9 81 857 A S T 3 + 0 0 87 -3,-0.3 2,-0.4 2,-0.0 -2,-0.1 0.845 68.5 64.0 -41.6 -41.3 -22.2 -5.1 10.1 82 858 A S < 0 0 94 -3,-0.9 -5,-0.0 0, 0.0 -3,-0.0 -0.722 360.0 360.0 -91.4 135.8 -25.0 -2.7 10.8 83 859 A G 0 0 133 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.913 360.0 360.0-124.0 360.0 -25.8 -1.8 14.4