==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 28-APR-06 2DOF . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7628.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 71.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 43 50.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 881 A G 0 0 120 0, 0.0 3,-0.0 0, 0.0 2,-0.0 0.000 360.0 360.0 360.0-179.0 -20.3 -19.6 -14.7 2 882 A S - 0 0 105 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.272 360.0-147.1 -53.0 123.9 -16.9 -20.9 -15.6 3 883 A S S S+ 0 0 120 2,-0.1 -1,-0.1 -2,-0.0 0, 0.0 0.973 76.7 80.4 -58.1 -58.8 -14.6 -20.9 -12.5 4 884 A G S S- 0 0 55 1,-0.1 2,-0.4 -3,-0.0 -2,-0.0 -0.221 82.8-128.9 -53.4 135.3 -11.4 -20.1 -14.4 5 885 A S + 0 0 127 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.759 42.4 146.6 -92.7 130.9 -11.1 -16.4 -15.3 6 886 A S + 0 0 106 -2,-0.4 3,-0.2 0, 0.0 2,-0.1 -0.989 25.0 52.7-158.8 155.6 -10.3 -15.5 -18.9 7 887 A G S S- 0 0 63 -2,-0.3 3,-0.3 1,-0.1 -2,-0.0 -0.249 83.2 -80.7 103.4 166.6 -10.9 -12.9 -21.5 8 888 A D S S+ 0 0 134 1,-0.2 3,-0.4 -2,-0.1 -1,-0.1 -0.163 79.3 128.1 -98.8 38.5 -10.6 -9.1 -21.7 9 889 A R S S+ 0 0 232 1,-0.3 2,-0.5 -3,-0.2 -1,-0.2 0.952 80.7 22.6 -57.5 -53.2 -13.9 -8.5 -19.8 10 890 A E S S+ 0 0 110 -3,-0.3 -1,-0.3 1,-0.1 -3,-0.0 -0.892 72.8 132.3-122.7 101.3 -12.3 -6.2 -17.3 11 891 A R > + 0 0 144 -2,-0.5 4,-2.6 -3,-0.4 5,-0.2 0.744 66.1 59.1-112.1 -45.6 -9.0 -4.5 -18.3 12 892 A E H > S+ 0 0 174 2,-0.2 4,-0.9 1,-0.2 3,-0.3 0.969 117.3 29.5 -48.9 -74.5 -9.5 -0.8 -17.5 13 893 A Q H >> S+ 0 0 94 1,-0.2 4,-2.3 2,-0.2 3,-1.5 0.947 114.5 63.4 -52.6 -55.1 -10.1 -1.2 -13.7 14 894 A H H 3> S+ 0 0 97 1,-0.3 4,-2.4 2,-0.2 5,-0.2 0.868 95.3 60.9 -35.8 -54.2 -7.9 -4.4 -13.5 15 895 A K H 3X S+ 0 0 137 -4,-2.6 4,-0.8 -3,-0.3 -1,-0.3 0.890 112.9 36.8 -42.3 -50.4 -4.9 -2.3 -14.6 16 896 A R H XX S+ 0 0 126 -3,-1.5 4,-1.8 -4,-0.9 3,-1.4 0.962 108.0 63.4 -69.4 -53.8 -5.4 -0.1 -11.5 17 897 A E H 3X S+ 0 0 67 -4,-2.3 4,-2.0 1,-0.3 5,-0.3 0.865 99.2 56.6 -36.2 -52.7 -6.5 -2.9 -9.1 18 898 A E H 3X S+ 0 0 124 -4,-2.4 4,-2.7 1,-0.2 -1,-0.3 0.898 105.8 50.7 -48.8 -46.3 -3.0 -4.6 -9.6 19 899 A A H X S+ 0 0 77 -4,-2.1 4,-1.9 1,-0.2 3,-0.5 0.947 112.6 48.7 -53.9 -54.1 -0.2 -2.7 0.1 25 905 A A H 3X S+ 0 0 52 -4,-2.4 4,-2.5 1,-0.3 -1,-0.2 0.894 110.0 52.4 -53.9 -43.4 2.2 -5.7 -0.3 26 906 A L H 3X>S+ 0 0 4 -4,-2.3 4,-2.5 -5,-0.2 5,-0.6 0.830 106.4 54.9 -63.1 -32.3 5.1 -3.4 -0.9 27 907 A L H <5S+ 0 0 128 -4,-2.5 3,-0.5 -5,-0.2 -2,-0.2 0.978 127.3 28.1 -63.0 -58.7 7.5 -5.8 2.8 30 910 A M H 3<5S+ 0 0 85 -4,-2.5 2,-1.0 1,-0.3 3,-0.2 0.973 132.8 35.9 -68.0 -56.4 9.4 -2.5 2.8 31 911 A V T 3<< + 0 0 13 -4,-1.7 -1,-0.3 -5,-0.6 -2,-0.1 -0.616 67.5 149.3-100.5 73.3 7.6 -1.0 5.8 32 912 A R < + 0 0 198 -2,-1.0 -1,-0.2 -3,-0.5 2,-0.1 0.716 57.1 75.8 -75.5 -21.3 7.2 -4.0 8.0 33 913 A S - 0 0 77 -3,-0.2 3,-0.1 1,-0.1 40,-0.1 -0.343 64.9-155.0 -86.2 170.1 7.4 -1.9 11.1 34 914 A S S S+ 0 0 27 -2,-0.1 -1,-0.1 1,-0.1 40,-0.1 0.268 77.8 84.7-126.9 5.4 4.7 0.5 12.5 35 915 A D S S+ 0 0 150 2,-0.1 2,-0.2 35,-0.0 -1,-0.1 -0.107 74.7 97.1-100.3 34.6 7.0 2.9 14.4 36 916 A V - 0 0 61 -3,-0.1 2,-0.3 -5,-0.1 3,-0.1 -0.753 67.8-122.0-119.5 167.1 7.6 5.0 11.3 37 917 A S > - 0 0 68 -2,-0.2 4,-2.4 1,-0.1 5,-0.1 -0.772 22.6-117.2-109.7 154.8 6.2 8.2 9.8 38 918 A W H > S+ 0 0 27 -2,-0.3 4,-2.5 2,-0.2 5,-0.3 0.961 110.8 56.4 -50.5 -61.8 4.5 8.8 6.4 39 919 A S H > S+ 0 0 85 1,-0.2 4,-2.6 2,-0.2 5,-0.3 0.890 110.4 43.3 -35.0 -69.4 7.1 11.3 5.3 40 920 A D H > S+ 0 0 90 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.909 117.0 49.2 -45.6 -51.5 10.0 8.9 5.8 41 921 A T H >X S+ 0 0 5 -4,-2.4 4,-3.0 2,-0.2 3,-0.6 0.981 109.9 47.3 -53.2 -69.7 8.0 6.1 4.2 42 922 A R H 3X S+ 0 0 80 -4,-2.5 4,-3.1 1,-0.3 -1,-0.2 0.886 113.5 50.0 -38.3 -55.6 6.8 7.9 1.1 43 923 A R H 3X S+ 0 0 167 -4,-2.6 4,-0.6 -5,-0.3 -1,-0.3 0.906 112.8 47.2 -52.6 -45.7 10.4 9.1 0.5 44 924 A T H XX S+ 0 0 62 -4,-2.5 3,-1.2 -3,-0.6 4,-1.0 0.933 113.5 46.7 -63.0 -47.9 11.7 5.6 0.9 45 925 A L H 3< S+ 0 0 0 -4,-3.0 3,-0.5 1,-0.3 6,-0.3 0.865 99.8 68.7 -62.8 -36.8 9.0 4.1 -1.4 46 926 A R H 3< S+ 0 0 138 -4,-3.1 -1,-0.3 -5,-0.4 -2,-0.2 0.768 102.0 48.3 -53.6 -25.5 9.7 6.8 -4.0 47 927 A K H << S+ 0 0 175 -3,-1.2 -1,-0.3 -4,-0.6 -2,-0.2 0.808 93.3 95.9 -84.7 -33.1 13.1 5.1 -4.4 48 928 A D S < S- 0 0 26 -4,-1.0 4,-0.3 -3,-0.5 -3,-0.0 -0.005 76.0-129.6 -52.8 163.5 11.6 1.6 -4.8 49 929 A H S > S+ 0 0 152 2,-0.2 3,-2.1 1,-0.1 4,-0.4 0.948 103.4 52.1 -82.5 -57.4 10.9 0.2 -8.3 50 930 A R T >> S+ 0 0 148 1,-0.3 4,-1.5 2,-0.2 3,-1.4 0.866 94.3 75.4 -46.8 -41.7 7.3 -0.9 -8.0 51 931 A W H 3> S+ 0 0 18 -6,-0.3 4,-0.7 1,-0.3 3,-0.3 0.841 82.5 69.5 -39.4 -42.7 6.5 2.6 -6.6 52 932 A E H X4 S+ 0 0 108 -3,-2.1 3,-1.4 -4,-0.3 -1,-0.3 0.913 104.2 39.0 -42.9 -56.2 6.8 3.7 -10.3 53 933 A S H X4 S+ 0 0 86 -3,-1.4 3,-1.3 -4,-0.4 -1,-0.3 0.773 102.8 73.3 -67.8 -26.2 3.6 1.9 -11.2 54 934 A G H >< + 0 0 4 -4,-1.5 3,-1.6 -3,-0.3 -1,-0.3 0.652 67.2 97.6 -62.9 -13.6 2.1 2.9 -7.9 55 935 A S T << + 0 0 88 -3,-1.4 -1,-0.3 -4,-0.7 -2,-0.1 0.858 65.0 76.1 -41.8 -43.8 1.8 6.4 -9.4 56 936 A L T < S+ 0 0 105 -3,-1.3 2,-0.4 -4,-0.2 -1,-0.3 0.864 80.9 76.5 -34.7 -55.5 -1.8 5.5 -10.2 57 937 A L S < S- 0 0 11 -3,-1.6 5,-0.1 -4,-0.2 -1,-0.0 -0.474 91.4-124.9 -65.6 118.8 -2.7 6.0 -6.5 58 938 A E > - 0 0 112 -2,-0.4 4,-2.7 1,-0.1 5,-0.3 -0.228 28.7 -99.1 -62.8 153.2 -2.9 9.8 -5.8 59 939 A R H > S+ 0 0 168 1,-0.3 4,-2.9 2,-0.2 5,-0.2 0.866 127.5 49.1 -38.0 -50.4 -0.7 11.2 -3.0 60 940 A E H > S+ 0 0 139 2,-0.2 4,-2.8 1,-0.2 -1,-0.3 0.949 110.7 49.0 -57.5 -52.6 -3.8 11.1 -0.8 61 941 A E H > S+ 0 0 58 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.938 114.1 45.9 -53.0 -52.3 -4.7 7.5 -1.7 62 942 A K H X S+ 0 0 7 -4,-2.7 4,-2.3 1,-0.2 -2,-0.2 0.956 111.6 50.8 -56.5 -54.8 -1.1 6.3 -1.0 63 943 A E H X S+ 0 0 78 -4,-2.9 4,-2.3 -5,-0.3 -1,-0.2 0.906 110.4 50.8 -50.0 -47.3 -0.8 8.2 2.3 64 944 A K H X S+ 0 0 128 -4,-2.8 4,-2.6 -5,-0.2 -1,-0.2 0.937 108.9 51.2 -57.5 -50.0 -4.1 6.7 3.4 65 945 A L H X S+ 0 0 12 -4,-2.4 4,-2.6 -5,-0.2 -2,-0.2 0.962 110.8 47.1 -52.1 -60.2 -3.0 3.1 2.5 66 946 A F H X S+ 0 0 3 -4,-2.3 4,-2.2 1,-0.2 3,-0.4 0.946 111.9 49.5 -46.7 -62.0 0.3 3.4 4.4 67 947 A N H X S+ 0 0 69 -4,-2.3 4,-2.3 1,-0.3 5,-0.3 0.903 111.6 49.7 -44.9 -50.8 -1.3 4.8 7.6 68 948 A E H X S+ 0 0 86 -4,-2.6 4,-2.1 1,-0.2 -1,-0.3 0.888 107.8 54.3 -57.6 -41.1 -3.9 2.1 7.5 69 949 A H H X S+ 0 0 31 -4,-2.6 4,-1.9 -3,-0.4 -1,-0.2 0.884 110.1 47.6 -61.1 -39.8 -1.1 -0.5 7.1 70 950 A I H X S+ 0 0 21 -4,-2.2 4,-1.9 2,-0.2 3,-0.4 0.991 110.9 46.9 -65.2 -63.0 0.6 0.8 10.3 71 951 A E H X S+ 0 0 125 -4,-2.3 4,-1.4 1,-0.3 -1,-0.2 0.860 112.7 53.6 -47.1 -40.6 -2.4 1.0 12.6 72 952 A A H X S+ 0 0 56 -4,-2.1 4,-1.0 -5,-0.3 -1,-0.3 0.927 105.4 52.8 -62.1 -46.8 -3.3 -2.5 11.4 73 953 A L H >X S+ 0 0 45 -4,-1.9 3,-1.8 -3,-0.4 4,-1.7 0.962 103.3 55.7 -53.5 -58.6 0.2 -3.8 12.3 74 954 A T H 3< S+ 0 0 55 -4,-1.9 -1,-0.2 1,-0.3 -2,-0.2 0.868 98.9 63.4 -41.8 -46.3 0.1 -2.5 15.9 75 955 A K H 3< S+ 0 0 185 -4,-1.4 -1,-0.3 1,-0.3 -2,-0.2 0.879 104.9 46.0 -47.9 -43.4 -3.2 -4.5 16.4 76 956 A K H << S+ 0 0 170 -3,-1.8 -1,-0.3 -4,-1.0 -2,-0.2 0.898 87.8 105.8 -68.2 -41.6 -1.2 -7.7 15.8 77 957 A K < - 0 0 128 -4,-1.7 -3,-0.0 1,-0.1 0, 0.0 -0.127 69.1-142.3 -43.1 123.6 1.6 -6.6 18.1 78 958 A R S S+ 0 0 246 1,-0.1 2,-0.6 0, 0.0 -1,-0.1 0.974 87.9 46.7 -54.8 -62.0 1.3 -8.6 21.3 79 959 A E S S+ 0 0 152 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.752 78.4 130.4 -89.2 122.1 2.3 -5.8 23.6 80 960 A S - 0 0 52 -2,-0.6 3,-0.2 -5,-0.0 -5,-0.0 -0.961 60.0 -70.7-167.3 149.9 0.5 -2.5 22.9 81 961 A G - 0 0 47 -2,-0.3 2,-1.0 1,-0.2 -1,-0.0 0.137 69.3 -78.9 -39.0 158.8 -1.4 0.3 24.7 82 962 A P - 0 0 141 0, 0.0 2,-0.7 0, 0.0 -1,-0.2 -0.529 56.4-179.8 -69.8 99.9 -4.9 -0.5 25.9 83 963 A S + 0 0 108 -2,-1.0 2,-0.2 -3,-0.2 -3,-0.0 -0.901 21.0 131.7-108.6 111.1 -7.1 -0.3 22.7 84 964 A S 0 0 123 -2,-0.7 0, 0.0 1,-0.1 0, 0.0 -0.791 360.0 360.0-161.7 112.5 -10.8 -1.0 23.2 85 965 A G 0 0 137 -2,-0.2 -1,-0.1 0, 0.0 0, 0.0 -0.281 360.0 360.0 52.2 360.0 -13.7 1.0 22.0