==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 07-JUL-08 3DP5 . COMPND 2 MOLECULE: CYTOCHROME C FAMILY PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; . AUTHOR P.LUKAT,M.HOFFMANN,O.EINSLE . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7134.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 52.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 29.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -20 A A 0 0 144 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 71.3 12.4 -2.6 9.6 2 -19 A A > - 0 0 41 1,-0.1 3,-1.8 4,-0.0 0, 0.0 -0.440 360.0 -98.0 -83.6 171.0 9.9 -2.5 6.8 3 -18 A S T 3 S+ 0 0 132 1,-0.3 -1,-0.1 -2,-0.1 0, 0.0 0.837 128.2 46.2 -59.5 -33.5 6.6 -4.4 7.0 4 -17 A W T 3 S+ 0 0 197 2,-0.0 -1,-0.3 0, 0.0 2,-0.0 0.334 82.2 128.6 -90.7 1.1 8.2 -7.1 5.0 5 -16 A S < - 0 0 61 -3,-1.8 0, 0.0 1,-0.1 0, 0.0 -0.351 53.3-130.9 -63.6 143.8 11.6 -7.3 6.9 6 -15 A H - 0 0 155 1,-0.1 -1,-0.1 -2,-0.0 -2,-0.0 -0.582 17.8 -98.0-100.3 155.0 12.5 -10.8 8.0 7 -14 A P - 0 0 128 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.243 41.1-144.9 -61.1 158.2 13.6 -12.3 11.4 8 -13 A Q - 0 0 134 2,-0.1 0, 0.0 1,-0.1 0, 0.0 -0.927 23.2-159.8-123.8 152.6 17.4 -12.7 11.8 9 -12 A F S S+ 0 0 173 -2,-0.3 -1,-0.1 2,-0.0 2,-0.1 0.599 71.3 98.3 -94.4 -20.8 19.4 -15.3 13.5 10 -11 A E + 0 0 106 2,-0.0 2,-0.3 3,-0.0 -2,-0.1 -0.356 51.4 172.8 -75.0 146.9 22.4 -12.9 13.6 11 -10 A K + 0 0 162 -2,-0.1 -2,-0.0 1,-0.1 -1,-0.0 -0.989 44.4 39.6-149.7 151.3 23.0 -10.9 16.8 12 -9 A G > + 0 0 36 -2,-0.3 3,-1.2 1,-0.0 4,-0.3 0.502 56.5 133.6 87.1 7.4 25.6 -8.5 18.3 13 -8 A A G > S+ 0 0 81 1,-0.2 3,-1.5 2,-0.2 -2,-0.0 0.855 70.3 65.0 -49.5 -37.5 26.5 -6.3 15.3 14 -7 A E G 3 S+ 0 0 157 1,-0.3 -1,-0.2 2,-0.0 -3,-0.0 0.789 102.4 44.8 -57.9 -34.7 26.0 -3.3 17.7 15 -6 A T G < S+ 0 0 114 -3,-1.2 2,-2.1 1,-0.1 -1,-0.3 0.358 79.5 106.9 -98.8 5.6 28.9 -4.3 19.9 16 -5 A A < + 0 0 84 -3,-1.5 -1,-0.1 -4,-0.3 -3,-0.1 -0.436 52.3 141.7 -81.0 66.0 31.4 -5.1 17.0 17 -4 A V - 0 0 101 -2,-2.1 2,-0.1 1,-0.1 -2,-0.0 -0.733 56.0-105.9-109.5 152.6 33.4 -2.0 17.6 18 -3 A P - 0 0 117 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.450 42.9-100.7 -66.9 154.6 37.2 -1.4 17.5 19 -2 A N - 0 0 148 -2,-0.1 67,-0.0 1,-0.1 0, 0.0 -0.689 44.4-122.6 -70.7 121.4 39.0 -1.0 20.8 20 -1 A S - 0 0 31 -2,-0.5 2,-0.2 1,-0.1 69,-0.1 -0.290 26.5-108.4 -66.1 153.1 39.5 2.7 21.2 21 26 A G > - 0 0 30 1,-0.1 4,-2.1 68,-0.0 5,-0.2 -0.580 15.4-127.0 -83.9 151.9 43.1 4.0 21.7 22 27 A G H > S+ 0 0 9 -2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.882 107.7 54.0 -64.2 -42.8 44.4 5.3 25.0 23 28 A G H > S+ 0 0 28 2,-0.2 4,-2.6 1,-0.2 -1,-0.2 0.909 110.5 45.9 -59.9 -44.4 45.7 8.6 23.5 24 29 A E H > S+ 0 0 121 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.921 114.0 48.5 -64.2 -44.0 42.3 9.4 22.0 25 30 A L H X S+ 0 0 12 -4,-2.1 4,-2.8 2,-0.2 5,-0.4 0.904 111.8 50.1 -61.7 -44.5 40.5 8.5 25.2 26 31 A F H X>S+ 0 0 8 -4,-2.9 4,-2.7 2,-0.2 5,-2.2 0.946 109.9 50.2 -56.6 -50.6 42.9 10.6 27.2 27 32 A A H <5S+ 0 0 64 -4,-2.6 5,-0.3 3,-0.2 -2,-0.2 0.908 116.1 43.3 -52.2 -47.6 42.4 13.6 24.8 28 33 A T H <5S+ 0 0 103 -4,-2.4 -2,-0.2 -5,-0.1 -1,-0.2 0.933 129.7 19.7 -63.8 -50.6 38.5 13.2 25.2 29 34 A H H <5S+ 0 0 61 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.2 0.683 134.1 18.6-100.5 -21.1 38.2 12.6 29.0 30 35 A C T >X5S+ 0 0 21 -4,-2.7 4,-2.1 -5,-0.4 3,-0.8 0.718 96.0 77.4-125.6 -34.2 41.4 13.9 30.7 31 36 A A T 34< S+ 0 0 23 -4,-2.1 3,-2.2 5,-0.2 -1,-0.2 -0.443 75.0 177.8-121.2 53.8 45.7 17.4 32.5 35 40 A P G > S- 0 0 55 0, 0.0 3,-1.8 0, 0.0 4,-0.1 -0.442 78.8 -5.4 -69.5 133.0 47.3 18.9 29.4 36 41 A Q G 3 S- 0 0 192 1,-0.3 3,-0.1 -2,-0.1 -5,-0.0 0.736 133.4 -60.5 55.0 27.3 50.7 17.4 28.7 37 42 A G G < S+ 0 0 6 -3,-2.2 10,-2.6 1,-0.1 11,-0.4 0.677 113.1 116.7 75.6 21.7 50.2 15.5 32.0 38 43 A G < - 0 0 21 -3,-1.8 2,-0.2 8,-0.2 9,-0.2 0.088 63.7-119.7 -92.5-148.6 50.0 18.7 34.1 39 44 A N - 0 0 27 -5,-0.1 -5,-0.2 7,-0.1 6,-0.1 -0.754 21.5-177.3-162.2 109.6 46.9 19.8 36.1 40 45 A T S S+ 0 0 89 -7,-2.5 -6,-0.1 -2,-0.2 -7,-0.1 0.568 87.1 47.4 -84.9 -11.4 45.1 23.1 35.5 41 46 A V S S+ 0 0 86 -8,-0.5 -1,-0.1 1,-0.3 -7,-0.1 0.841 129.2 17.5 -96.7 -46.4 42.6 22.6 38.4 42 47 A H S > S- 0 0 75 -9,-0.2 3,-2.6 3,-0.1 -1,-0.3 -0.845 74.0-163.2-127.0 91.4 45.0 21.6 41.2 43 48 A P T 3 S+ 0 0 96 0, 0.0 3,-0.3 0, 0.0 -4,-0.1 0.723 85.9 57.0 -48.3 -32.1 48.5 22.7 40.0 44 49 A E T 3 S+ 0 0 154 1,-0.2 2,-0.6 -6,-0.0 0, 0.0 0.602 93.3 71.2 -77.6 -9.9 50.4 20.5 42.6 45 50 A K < + 0 0 105 -3,-2.6 -1,-0.2 -6,-0.1 -3,-0.1 -0.437 66.6 158.1-109.3 61.8 48.7 17.3 41.4 46 51 A T - 0 0 45 -2,-0.6 -8,-0.2 -3,-0.3 -7,-0.1 -0.235 52.6-116.4 -76.7 170.1 50.4 16.7 38.0 47 52 A L + 0 0 26 -10,-2.6 -9,-0.1 -9,-0.2 51,-0.1 0.235 65.5 139.8 -91.7 8.1 50.5 13.2 36.3 48 53 A A >> - 0 0 30 -11,-0.4 4,-2.3 1,-0.1 3,-0.7 -0.312 64.6-117.2 -51.1 135.2 54.3 13.2 36.6 49 54 A R H 3> S+ 0 0 115 49,-0.4 4,-2.6 1,-0.2 5,-0.2 0.871 111.8 49.8 -47.2 -51.1 55.4 9.7 37.5 50 55 A A H 3> S+ 0 0 56 49,-0.4 4,-1.0 1,-0.2 -1,-0.2 0.845 112.7 48.7 -59.4 -34.6 57.0 10.6 40.9 51 56 A R H <> S+ 0 0 140 -3,-0.7 4,-0.6 2,-0.2 3,-0.3 0.919 111.2 47.3 -73.2 -44.8 53.9 12.6 41.9 52 57 A R H ><>S+ 0 0 16 -4,-2.3 5,-2.3 1,-0.2 3,-1.0 0.905 113.2 51.1 -58.9 -45.0 51.3 9.8 40.9 53 58 A E H ><5S+ 0 0 47 -4,-2.6 3,-1.6 -5,-0.3 -1,-0.2 0.719 95.2 69.5 -68.8 -23.4 53.5 7.3 42.8 54 59 A A H 3<5S+ 0 0 66 -4,-1.0 -1,-0.2 -3,-0.3 -2,-0.2 0.767 105.2 42.7 -64.2 -25.9 53.6 9.5 45.9 55 60 A N T <<5S- 0 0 97 -3,-1.0 -1,-0.3 -4,-0.6 -2,-0.2 0.153 127.0-100.9-102.7 18.4 49.9 8.7 46.4 56 61 A G T < 5S+ 0 0 46 -3,-1.6 2,-1.2 1,-0.2 3,-0.3 0.604 80.3 136.0 73.0 13.4 50.4 4.9 45.5 57 62 A I < + 0 0 25 -5,-2.3 -1,-0.2 1,-0.2 -2,-0.1 -0.738 22.5 135.6 -91.7 86.3 49.1 5.3 41.9 58 63 A R + 0 0 151 -2,-1.2 2,-0.2 -5,-0.1 -1,-0.2 0.780 48.6 45.4-106.7 -40.1 51.9 3.2 40.3 59 64 A T S > S- 0 0 71 -3,-0.3 4,-1.9 1,-0.1 3,-0.2 -0.577 84.5-101.5-106.7 169.4 50.5 0.8 37.7 60 65 A V H > S+ 0 0 32 1,-0.2 4,-1.8 2,-0.2 5,-0.2 0.920 123.9 48.9 -47.9 -47.2 48.0 0.8 34.8 61 66 A R H > S+ 0 0 177 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.745 104.8 58.1 -76.6 -22.0 45.4 -0.8 37.0 62 67 A D H > S+ 0 0 57 -3,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.923 110.0 44.7 -64.1 -47.9 46.0 1.7 39.8 63 68 A V H X S+ 0 0 12 -4,-1.9 4,-1.8 2,-0.2 -2,-0.2 0.899 111.0 52.8 -51.6 -47.4 45.1 4.5 37.2 64 69 A A H < S+ 0 0 13 -4,-1.8 4,-0.2 1,-0.2 -1,-0.2 0.832 115.6 41.8 -77.0 -29.3 42.1 2.5 36.0 65 70 A A H >< S+ 0 0 65 -4,-1.4 3,-1.6 -5,-0.2 4,-0.5 0.880 107.1 60.9 -76.5 -45.6 40.9 2.2 39.7 66 71 A Y H >< S+ 0 0 75 -4,-2.8 3,-1.5 1,-0.3 -2,-0.2 0.887 96.4 60.2 -53.2 -42.9 41.7 5.8 40.7 67 72 A I T 3< S+ 0 0 11 -4,-1.8 10,-2.4 1,-0.3 -1,-0.3 0.694 92.3 69.2 -65.9 -15.9 39.3 7.3 38.1 68 73 A R T < S+ 0 0 65 -3,-1.6 -1,-0.3 -4,-0.2 -2,-0.2 0.745 122.8 5.5 -71.2 -24.8 36.3 5.5 39.8 69 74 A N S < S+ 0 0 143 -3,-1.5 -1,-0.2 -4,-0.5 -2,-0.1 -0.343 89.6 171.8-157.3 65.7 36.5 7.7 42.9 70 75 A P - 0 0 22 0, 0.0 3,-0.1 0, 0.0 6,-0.1 -0.052 33.3 -78.9 -84.7-175.2 39.0 10.5 42.5 71 76 A G > - 0 0 28 1,-0.2 3,-1.8 4,-0.1 0, 0.0 -0.002 67.7 -54.7 -75.5 176.5 40.0 13.6 44.5 72 77 A P T 3 S+ 0 0 140 0, 0.0 -1,-0.2 0, 0.0 -30,-0.0 -0.203 122.8 20.5 -57.6 135.7 38.3 17.0 44.7 73 78 A G T 3 S+ 0 0 61 1,-0.2 -2,-0.1 -3,-0.1 -31,-0.0 0.356 102.7 98.2 88.3 -5.4 37.7 18.8 41.4 74 79 A M S < S- 0 0 47 -3,-1.8 -1,-0.2 -4,-0.1 2,-0.1 -0.958 72.6-127.9-109.8 130.5 38.0 15.6 39.3 75 80 A P - 0 0 80 0, 0.0 2,-0.3 0, 0.0 -6,-0.1 -0.459 20.7-116.4 -75.3 151.9 34.8 13.8 38.2 76 81 A A - 0 0 60 -2,-0.1 2,-0.6 -8,-0.1 -8,-0.2 -0.612 24.1-149.1 -79.4 142.9 34.3 10.2 38.9 77 82 A F - 0 0 19 -10,-2.4 2,-0.1 -2,-0.3 -1,-0.0 -0.960 13.9-160.1-114.3 116.1 34.0 8.0 35.7 78 83 A G > - 0 0 42 -2,-0.6 4,-2.7 1,-0.1 -9,-0.0 -0.233 35.6 -93.8-102.5-168.8 31.8 5.0 36.0 79 84 A E T 4 S+ 0 0 121 1,-0.3 -1,-0.1 2,-0.2 8,-0.1 0.725 117.9 60.5 -98.5 -20.8 31.8 2.0 34.0 80 85 A A T 4 S+ 0 0 105 1,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.938 116.3 34.9 -65.0 -48.4 29.0 3.1 31.5 81 86 A M T 4 S+ 0 0 116 1,-0.3 -2,-0.2 -3,-0.0 -1,-0.1 0.927 136.6 21.1 -71.2 -47.4 31.1 6.0 30.5 82 87 A I S < S- 0 0 2 -4,-2.7 -1,-0.3 4,-0.0 -2,-0.1 -0.849 83.2-155.4-126.1 90.5 34.5 4.3 30.7 83 88 A P >> - 0 0 51 0, 0.0 4,-2.4 0, 0.0 3,-0.5 -0.219 34.9 -97.4 -61.6 158.9 34.2 0.6 30.5 84 89 A P H 3> S+ 0 0 68 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.849 124.8 52.0 -45.1 -47.4 36.9 -1.6 32.1 85 90 A A H 3> S+ 0 0 65 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.913 112.5 46.5 -59.0 -40.6 38.7 -2.2 28.8 86 91 A D H <> S+ 0 0 33 -3,-0.5 4,-2.3 1,-0.2 -1,-0.2 0.861 107.5 56.2 -70.6 -38.1 38.8 1.6 28.2 87 92 A A H X S+ 0 0 2 -4,-2.4 4,-2.5 2,-0.2 -1,-0.2 0.886 106.8 50.8 -58.3 -41.4 40.0 2.3 31.7 88 93 A L H X S+ 0 0 56 -4,-1.9 4,-3.1 -5,-0.2 -2,-0.2 0.921 109.0 50.9 -62.2 -45.4 43.0 0.0 31.1 89 94 A K H X S+ 0 0 70 -4,-1.7 4,-2.3 2,-0.2 -2,-0.2 0.888 110.9 48.1 -58.7 -45.9 43.8 1.8 27.8 90 95 A I H X S+ 0 0 2 -4,-2.3 4,-2.4 2,-0.2 -1,-0.2 0.925 112.4 49.4 -62.0 -47.4 43.7 5.2 29.6 91 96 A G H X S+ 0 0 0 -4,-2.5 4,-2.5 2,-0.2 5,-0.2 0.930 109.9 51.7 -52.9 -49.7 45.9 3.8 32.4 92 97 A E H X S+ 0 0 94 -4,-3.1 4,-2.8 1,-0.2 -2,-0.2 0.906 110.8 47.5 -50.9 -48.6 48.4 2.4 29.7 93 98 A Y H X S+ 0 0 82 -4,-2.3 4,-1.5 2,-0.2 5,-0.2 0.911 110.9 51.1 -65.6 -42.6 48.6 5.8 28.1 94 99 A V H X S+ 0 0 7 -4,-2.4 4,-2.1 2,-0.2 3,-0.4 0.955 115.7 41.5 -58.2 -49.2 49.1 7.6 31.4 95 100 A V H < S+ 0 0 59 -4,-2.5 -2,-0.2 1,-0.2 -1,-0.2 0.908 117.6 46.8 -67.7 -41.2 52.0 5.2 32.4 96 101 A A H < S+ 0 0 89 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.674 120.6 39.5 -69.9 -18.9 53.5 5.2 28.8 97 102 A S H < S+ 0 0 44 -4,-1.5 -2,-0.2 -3,-0.4 -3,-0.2 0.794 100.2 60.3-106.2 -36.9 53.3 9.0 28.6 98 103 A F < 0 0 22 -4,-2.1 -49,-0.4 -5,-0.2 -1,-0.2 -0.820 360.0 360.0-113.8 102.4 54.2 10.9 31.7 99 104 A P 0 0 131 0, 0.0 -49,-0.4 0, 0.0 -1,-0.1 0.549 360.0 360.0 -77.1 360.0 57.7 10.5 33.2