==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-FEB-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 13-FEB-12 4DP4 . COMPND 2 MOLECULE: PLASTOCYANIN B, CHLOROPLASTIC; . SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS NIGRA; . AUTHOR G.S.KACHALOVA,A.H.SHOSHEVA,G.P.BOURENKOV,A.A.DONCHEV,M.I.DIM . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5051.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 21.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 15 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X V 0 0 57 0, 0.0 27,-2.9 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 142.1 -4.0 5.5 52.0 2 2 X D E -a 28 0A 91 25,-0.2 2,-0.4 27,-0.1 27,-0.2 -0.774 360.0-168.3-100.4 142.7 -1.1 3.1 52.7 3 3 X V E -a 29 0A 0 25,-2.7 27,-3.1 -2,-0.3 2,-0.2 -0.992 17.1-136.0-129.5 124.4 -1.4 -0.6 52.1 4 4 X L E -aB 30 15A 48 11,-3.2 11,-2.1 -2,-0.4 2,-0.9 -0.560 4.7-139.4 -85.2 143.8 1.3 -2.9 53.3 5 5 X L E S+aB 31 14A 0 25,-2.7 27,-2.2 -2,-0.2 28,-2.1 -0.882 79.8 3.3-100.5 101.8 2.8 -5.7 51.3 6 6 X G S S- 0 0 0 7,-2.4 6,-0.2 -2,-0.9 2,-0.2 0.359 86.6-100.4 93.7 132.7 3.2 -8.6 53.7 7 7 X A > - 0 0 16 4,-2.4 3,-2.4 1,-0.1 -2,-0.0 -0.476 31.5-110.5 -78.5 158.1 2.2 -8.6 57.3 8 8 X D T 3 S+ 0 0 134 1,-0.3 -1,-0.1 -2,-0.2 26,-0.1 0.789 119.2 57.1 -58.7 -26.6 4.7 -8.1 60.0 9 9 X D T 3 S- 0 0 128 24,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.303 125.7 -98.5 -86.4 8.2 4.3 -11.8 61.0 10 10 X G S < S+ 0 0 42 -3,-2.4 -2,-0.1 1,-0.3 2,-0.1 0.427 71.6 152.8 89.9 1.6 5.2 -13.0 57.5 11 11 X S - 0 0 48 1,-0.1 -4,-2.4 -5,-0.1 2,-1.7 -0.366 50.6-125.0 -65.7 138.9 1.7 -13.4 56.3 12 12 X L + 0 0 65 -6,-0.2 2,-0.3 78,-0.1 -1,-0.1 -0.622 67.6 117.4 -80.9 84.8 1.2 -13.1 52.6 13 13 X A - 0 0 31 -2,-1.7 -7,-2.4 79,-0.1 2,-0.3 -0.995 67.5-118.7-147.5 148.8 -1.4 -10.5 52.7 14 14 X F E -B 5 0A 3 79,-0.4 -9,-0.2 -2,-0.3 3,-0.1 -0.751 43.5-119.5 -76.5 144.9 -2.1 -7.0 51.7 15 15 X V E S+B 4 0A 58 -11,-2.1 -11,-3.2 -2,-0.3 2,-0.1 -0.924 105.1 20.3-135.5 105.1 -2.8 -4.9 54.8 16 16 X P S S- 0 0 53 0, 0.0 -1,-0.3 0, 0.0 3,-0.1 0.563 82.1-171.8 -77.8 156.9 -5.6 -3.8 54.6 17 17 X S S S+ 0 0 61 1,-0.2 78,-2.5 -2,-0.1 2,-0.3 0.586 75.4 29.0 -94.4 -12.5 -6.9 -6.3 52.0 18 18 X E E S+d 95 0B 133 76,-0.2 2,-0.3 -4,-0.1 -1,-0.2 -0.982 75.6 139.3-142.5 137.2 -10.2 -4.5 51.5 19 19 X F E -d 96 0B 25 76,-1.9 78,-2.6 -2,-0.3 2,-0.4 -0.983 39.6-121.7-164.5 164.7 -10.8 -0.8 51.8 20 20 X S E +d 97 0B 76 -2,-0.3 78,-0.2 76,-0.2 59,-0.0 -0.929 25.1 177.5-116.2 149.0 -12.6 2.1 50.3 21 21 X V E -d 98 0B 5 76,-2.4 78,-2.5 -2,-0.4 2,-0.1 -0.981 34.5-105.1-145.7 146.0 -11.0 5.4 49.0 22 22 X P > - 0 0 65 0, 0.0 3,-2.2 0, 0.0 52,-0.2 -0.457 56.9 -82.6 -70.9 150.2 -12.5 8.4 47.3 23 23 X A T 3 S+ 0 0 40 76,-2.9 52,-0.3 1,-0.2 3,-0.1 -0.282 117.6 22.1 -50.9 134.1 -11.8 8.6 43.6 24 24 X G T 3 S+ 0 0 46 50,-3.4 2,-0.3 1,-0.3 -1,-0.2 0.289 80.8 137.3 91.7 -10.5 -8.4 10.1 43.2 25 25 X E < - 0 0 74 -3,-2.2 49,-0.7 49,-0.3 2,-0.3 -0.510 60.4-116.2 -65.7 132.3 -6.9 9.4 46.5 26 26 X K E - C 0 73A 102 -2,-0.3 2,-0.5 47,-0.2 47,-0.3 -0.557 25.2-153.4 -71.8 127.7 -3.3 8.2 46.0 27 27 X I E - C 0 72A 0 45,-3.8 45,-2.3 -2,-0.3 2,-0.7 -0.916 6.8-159.2-102.7 126.2 -2.9 4.5 47.3 28 28 X V E -aC 2 71A 16 -27,-2.9 -25,-2.7 -2,-0.5 2,-0.5 -0.907 1.9-158.9-110.7 103.9 0.6 3.9 48.4 29 29 X F E -aC 3 70A 0 41,-3.1 41,-2.2 -2,-0.7 2,-0.5 -0.751 15.8-162.9 -80.4 122.9 1.5 0.2 48.4 30 30 X K E -aC 4 69A 88 -27,-3.1 -25,-2.7 -2,-0.5 2,-0.3 -0.954 18.3-123.9-119.4 123.8 4.4 -0.1 50.7 31 31 X N E +a 5 0A 0 37,-3.0 36,-3.1 -2,-0.5 -25,-0.1 -0.506 41.8 160.2 -67.3 126.9 6.6 -3.1 50.8 32 32 X N - 0 0 14 -27,-2.2 2,-0.3 1,-0.3 -26,-0.2 0.804 44.9 -19.6-118.1 -59.5 6.7 -4.5 54.2 33 33 X A S S+ 0 0 21 -28,-2.1 -1,-0.3 -22,-0.1 -24,-0.1 -0.997 104.6 27.1-156.7 156.1 7.8 -8.0 54.9 34 34 X G S S- 0 0 42 -2,-0.3 -1,-0.1 -28,-0.1 -28,-0.1 0.822 90.1-168.3 59.8 34.9 8.3 -11.4 53.4 35 35 X F + 0 0 72 -30,-0.1 2,-0.2 2,-0.1 29,-0.1 -0.277 64.8 107.4 -70.9 165.4 8.9 -10.1 49.9 36 36 X P + 0 0 44 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.288 63.1 150.0 -82.9 148.2 9.2 -10.4 47.1 37 37 X H B +G 63 0C 0 26,-1.5 26,-3.4 -2,-0.2 2,-0.3 -0.982 18.8 176.2-134.3 157.7 5.9 -8.8 46.4 38 38 X N - 0 0 0 -2,-0.3 2,-0.4 24,-0.2 49,-0.1 -0.894 23.5-120.0-146.5-168.7 4.3 -6.8 43.7 39 39 X V + 0 0 0 -2,-0.3 18,-3.2 45,-0.2 2,-0.3 -0.973 31.0 159.3-140.9 114.7 1.0 -5.2 42.8 40 40 X L E -E 83 0B 12 43,-2.9 43,-2.7 -2,-0.4 2,-0.4 -0.951 32.0-126.6-128.5 159.3 -1.2 -5.8 39.9 41 41 X F E -E 82 0B 2 -2,-0.3 2,-0.6 11,-0.3 41,-0.3 -0.814 28.4-115.6-104.6 141.5 -4.9 -5.2 39.1 42 42 X D > - 0 0 43 39,-3.2 3,-2.2 -2,-0.4 39,-0.4 -0.692 13.1-151.3 -83.8 114.8 -7.1 -8.0 37.8 43 43 X E T 3 S+ 0 0 143 -2,-0.6 3,-0.4 1,-0.3 -1,-0.2 0.733 97.1 52.4 -55.4 -23.6 -8.4 -7.3 34.4 44 44 X D T 3 S+ 0 0 140 1,-0.2 -1,-0.3 37,-0.1 -2,-0.0 0.393 111.3 45.5 -94.8 7.7 -11.5 -9.4 35.1 45 45 X A S < S+ 0 0 33 -3,-2.2 36,-1.9 36,-0.2 -3,-0.2 -0.208 88.4 90.8-149.8 51.7 -12.4 -7.7 38.3 46 46 X V S S- 0 0 25 -3,-0.4 34,-0.2 34,-0.2 3,-0.1 -0.933 84.7 -75.7-134.1 167.2 -12.2 -3.9 37.8 47 47 X P > - 0 0 20 0, 0.0 3,-2.0 0, 0.0 31,-0.1 -0.187 59.9 -89.4 -59.4 152.0 -14.8 -1.4 36.7 48 48 X S T 3 S+ 0 0 122 1,-0.2 3,-0.1 3,-0.0 -3,-0.0 -0.327 115.8 31.8 -60.7 138.8 -15.8 -1.3 33.1 49 49 X G T 3 S+ 0 0 77 1,-0.3 2,-0.4 -3,-0.1 -1,-0.2 0.266 88.6 124.3 98.9 -14.5 -13.6 1.1 31.3 50 50 X V < - 0 0 25 -3,-2.0 2,-0.7 -7,-0.1 -1,-0.3 -0.690 49.4-152.0 -87.0 135.6 -10.5 0.6 33.4 51 51 X D > - 0 0 70 -2,-0.4 3,-1.5 1,-0.1 4,-0.3 -0.924 4.2-161.7-104.2 107.6 -7.2 -0.5 31.8 52 52 X V G >> S+ 0 0 23 -2,-0.7 3,-1.6 1,-0.3 4,-0.7 0.781 82.5 71.5 -66.4 -20.9 -5.3 -2.4 34.4 53 53 X S G 34 S+ 0 0 86 1,-0.3 3,-0.5 2,-0.2 -1,-0.3 0.831 95.2 54.3 -63.1 -24.8 -2.0 -2.0 32.6 54 54 X K G <4 S+ 0 0 167 -3,-1.5 -1,-0.3 1,-0.2 -2,-0.2 0.642 116.3 36.6 -80.6 -11.5 -1.9 1.7 33.6 55 55 X I T <4 S+ 0 0 19 -3,-1.6 2,-0.3 -4,-0.3 -1,-0.2 0.239 104.8 78.5-128.1 10.2 -2.4 1.0 37.3 56 56 X S S < S- 0 0 23 -4,-0.7 -16,-0.2 -3,-0.5 2,-0.1 -0.865 75.4-113.4-117.5 157.1 -0.3 -2.2 37.8 57 57 X M - 0 0 22 -18,-3.2 2,-0.2 -2,-0.3 -16,-0.1 -0.468 48.2 -89.4 -71.1 161.8 3.3 -3.0 38.2 58 58 X S > - 0 0 57 1,-0.1 3,-2.3 -2,-0.1 -19,-0.1 -0.505 38.8-124.2 -67.4 137.1 5.0 -4.9 35.5 59 59 X E T 3 S+ 0 0 95 1,-0.3 -1,-0.1 -2,-0.2 26,-0.1 0.823 109.7 52.9 -58.4 -33.0 4.6 -8.5 36.4 60 60 X E T 3 S+ 0 0 149 25,-0.1 2,-0.5 2,-0.0 -1,-0.3 0.523 89.1 92.4 -77.6 -6.1 8.3 -9.1 36.3 61 61 X D < - 0 0 85 -3,-2.3 2,-0.4 2,-0.0 -4,-0.1 -0.776 58.4-175.4 -93.0 124.8 9.1 -6.2 38.7 62 62 X L - 0 0 65 -2,-0.5 2,-0.7 -24,-0.1 -24,-0.2 -0.938 26.7-130.7-124.4 142.8 9.3 -7.3 42.2 63 63 X L B +G 37 0C 19 -26,-3.4 -26,-1.5 -2,-0.4 4,-0.1 -0.860 30.8 170.4 -91.7 118.3 9.7 -5.3 45.4 64 64 X N + 0 0 99 -2,-0.7 2,-0.4 -28,-0.2 -1,-0.1 0.252 52.2 60.0-114.2 10.0 12.4 -7.0 47.3 65 65 X A S > S- 0 0 44 -32,-0.1 3,-1.6 0, 0.0 -34,-0.2 -0.998 85.6-101.4-145.3 145.7 13.2 -4.5 50.1 66 66 X K T 3 S+ 0 0 143 -2,-0.4 -34,-0.2 1,-0.2 3,-0.1 -0.256 102.7 27.4 -67.6 139.9 11.2 -3.0 52.8 67 67 X G T 3 S+ 0 0 41 -36,-3.1 -1,-0.2 1,-0.4 -35,-0.1 0.189 80.7 129.3 92.1 -11.5 10.0 0.6 52.2 68 68 X E < - 0 0 76 -3,-1.6 -37,-3.0 -38,-0.1 -1,-0.4 -0.364 44.0-154.9 -60.1 151.0 9.8 0.5 48.4 69 69 X T E -C 30 0A 59 -39,-0.2 2,-0.4 -3,-0.1 -39,-0.2 -0.938 25.2-158.3-130.9 161.3 6.5 1.7 47.2 70 70 X F E -C 29 0A 39 -41,-2.2 -41,-3.1 -2,-0.3 2,-0.4 -0.997 26.4-163.2-132.0 125.5 4.1 1.4 44.3 71 71 X E E +C 28 0A 96 -2,-0.4 2,-0.3 -43,-0.2 -43,-0.2 -0.916 15.1 163.2-121.1 134.1 1.7 4.4 44.1 72 72 X V E -C 27 0A 15 -45,-2.3 -45,-3.8 -2,-0.4 2,-0.4 -0.983 24.6-151.1-147.1 149.1 -1.5 4.7 42.2 73 73 X A E -C 26 0A 54 -2,-0.3 2,-0.5 -47,-0.3 -47,-0.2 -0.961 16.5-152.7-120.3 123.8 -4.6 6.9 42.1 74 74 X L + 0 0 4 -49,-0.7 -50,-3.4 -2,-0.4 -49,-0.3 -0.895 17.3 174.9-105.6 129.3 -7.8 5.4 40.9 75 75 X S + 0 0 84 -2,-0.5 2,-0.4 -52,-0.3 -1,-0.2 0.768 53.6 83.5-104.5 -32.9 -10.3 7.7 39.4 76 76 X D S S- 0 0 77 1,-0.1 22,-0.2 -29,-0.1 -52,-0.1 -0.581 79.6-122.8 -80.0 131.3 -13.1 5.5 38.1 77 77 X K + 0 0 141 -2,-0.4 2,-0.2 20,-0.1 22,-0.2 -0.331 65.0 58.8 -73.2 148.8 -15.6 4.5 40.7 78 78 X G E S- F 0 98B 27 20,-2.2 20,-3.0 -31,-0.1 2,-0.3 -0.751 86.9 -34.2 135.5-163.6 -16.4 0.8 41.6 79 79 X E E - F 0 97B 100 -2,-0.2 2,-0.4 18,-0.2 18,-0.2 -0.664 46.3-172.1 -95.2 136.0 -14.6 -2.3 42.8 80 80 X Y E - F 0 96B 3 16,-2.8 16,-2.8 -2,-0.3 2,-0.5 -0.995 10.9-152.6-128.6 130.3 -11.0 -3.2 41.9 81 81 X T E - F 0 95B 26 -36,-1.9 -39,-3.2 -2,-0.4 2,-0.3 -0.874 17.0-175.0 -98.8 126.8 -9.2 -6.5 42.7 82 82 X F E -EF 41 94B 0 12,-2.2 12,-2.9 -2,-0.5 2,-0.3 -0.795 3.2-178.8-116.3 160.4 -5.5 -6.3 43.1 83 83 X Y E -EF 40 93B 28 -43,-2.7 -43,-2.9 -2,-0.3 2,-0.5 -0.978 30.0-116.4-153.1 158.7 -3.0 -9.1 43.6 84 84 X C > - 0 0 0 8,-2.0 4,-1.2 -2,-0.3 -45,-0.2 -0.908 24.5-141.9 -98.0 132.4 0.6 -9.9 44.1 85 85 X S T >4 S+ 0 0 32 -2,-0.5 3,-0.7 1,-0.2 4,-0.4 0.954 98.0 44.3 -65.1 -47.2 2.0 -12.0 41.3 86 86 X P T 34 S+ 0 0 55 0, 0.0 -1,-0.2 0, 0.0 3,-0.2 0.847 126.6 32.3 -61.7 -32.3 4.2 -14.3 43.4 87 87 X H T >4>S+ 0 0 30 1,-0.2 5,-2.0 5,-0.1 3,-1.7 0.297 80.3 106.3-114.7 10.0 1.5 -14.8 46.0 88 88 X Q G X<5S+ 0 0 86 -4,-1.2 3,-1.5 -3,-0.7 -1,-0.2 0.890 84.8 52.4 -57.3 -39.7 -1.8 -14.7 44.1 89 89 X G G 3 5S+ 0 0 89 -4,-0.4 -1,-0.3 1,-0.3 -2,-0.1 0.518 104.8 57.0 -76.3 -4.9 -2.1 -18.5 44.5 90 90 X A G < 5S- 0 0 59 -3,-1.7 -1,-0.3 2,-0.1 -2,-0.2 0.223 126.6 -98.0-106.2 11.0 -1.6 -18.2 48.2 91 91 X G T < 5S+ 0 0 51 -3,-1.5 2,-1.9 1,-0.2 -3,-0.2 0.552 72.2 148.1 86.7 10.5 -4.5 -15.8 48.6 92 92 X M < + 0 0 0 -5,-2.0 -8,-2.0 -8,-0.2 2,-0.3 -0.615 36.2 116.9 -78.0 84.3 -2.5 -12.5 48.5 93 93 X V E - F 0 83B 57 -2,-1.9 -79,-0.4 -10,-0.2 2,-0.3 -0.918 39.1-174.9-144.9 161.6 -5.3 -10.5 46.9 94 94 X G E - F 0 82B 7 -12,-2.9 -12,-2.2 -2,-0.3 2,-0.4 -0.959 17.6-130.0-157.2 173.8 -7.4 -7.6 47.9 95 95 X K E -dF 18 81B 56 -78,-2.5 -76,-1.9 -2,-0.3 2,-0.4 -0.997 12.1-167.3-136.2 125.2 -10.2 -5.3 46.9 96 96 X V E -dF 19 80B 0 -16,-2.8 -16,-2.8 -2,-0.4 2,-0.6 -0.972 10.8-151.5-115.3 135.6 -10.5 -1.5 46.9 97 97 X I E -dF 20 79B 39 -78,-2.6 -76,-2.4 -2,-0.4 2,-0.5 -0.928 10.3-157.1-104.9 115.5 -13.8 0.3 46.5 98 98 X V E dF 21 78B 4 -20,-3.0 -20,-2.2 -2,-0.6 -23,-0.1 -0.831 360.0 360.0 -99.6 121.6 -13.4 3.6 44.8 99 99 X N 0 0 110 -78,-2.5 -76,-2.9 -2,-0.5 -1,-0.0 -0.517 360.0 360.0-128.9 360.0 -16.2 6.0 45.7