==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 14-JUN-06 2DRT . COMPND 2 MOLECULE: COLLAGEN LIKE PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR K.OKUYAMA . 86 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5276.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 34.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A X 0 0 192 0, 0.0 31,-0.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 165.9 -1.7 0.1 -39.3 2 3 A G - 0 0 20 59,-0.3 60,-0.2 1,-0.1 3,-0.1 -0.113 360.0 -88.2 -63.9 171.6 1.1 -1.5 -37.5 3 4 A P - 0 0 68 0, 0.0 60,-2.2 0, 0.0 29,-0.5 -0.334 55.6 -80.6 -75.1 167.1 0.5 -3.7 -34.5 4 5 A X - 0 0 94 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.254 51.0-110.2 -63.6 154.5 0.2 -2.4 -30.9 5 6 A G - 0 0 7 28,-1.7 60,-0.2 59,-0.5 -1,-0.1 -0.097 44.2 -73.0 -75.6-179.5 3.5 -1.6 -29.1 6 7 A P - 0 0 64 0, 0.0 60,-2.3 0, 0.0 29,-0.4 -0.240 62.6 -80.1 -66.3 161.5 4.9 -3.5 -26.1 7 8 A X - 0 0 99 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.266 57.3-106.4 -55.7 149.4 3.3 -3.2 -22.6 8 9 A G - 0 0 7 28,-2.4 60,-0.2 59,-0.3 -1,-0.1 -0.143 45.3 -71.0 -77.0 178.5 4.4 -0.0 -20.8 9 10 A P - 0 0 61 0, 0.0 60,-2.3 0, 0.0 29,-0.3 -0.217 59.8 -89.5 -65.4 154.2 6.9 0.2 -18.0 10 11 A X - 0 0 102 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.298 51.0-105.6 -58.1 148.7 6.0 -1.1 -14.5 11 12 A G - 0 0 12 28,-2.4 31,-0.4 59,-0.3 60,-0.2 -0.121 42.2 -81.4 -67.0 172.9 4.3 1.5 -12.3 12 13 A L - 0 0 119 57,-0.4 60,-2.4 29,-0.2 29,-0.4 -0.308 57.2 -84.1 -66.9 160.1 5.9 3.3 -9.3 13 14 A X - 0 0 88 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.307 53.5-106.8 -62.0 151.4 6.2 1.7 -5.9 14 15 A G - 0 0 8 28,-2.3 60,-0.2 59,-0.4 59,-0.2 0.011 46.7 -74.6 -67.5 178.8 3.1 2.1 -3.8 15 16 A P - 0 0 61 0, 0.0 60,-2.5 0, 0.0 29,-0.4 -0.310 62.3 -75.6 -72.6 162.8 2.9 4.4 -0.8 16 17 A X - 0 0 105 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.231 53.0-113.2 -52.5 145.9 4.5 3.7 2.6 17 18 A G - 0 0 7 28,-2.3 60,-0.2 59,-0.3 -1,-0.1 -0.233 41.5 -87.5 -71.8 171.3 2.7 1.2 4.7 18 19 A P - 0 0 57 0, 0.0 60,-2.2 0, 0.0 29,-0.3 -0.306 53.0 -74.5 -78.0 165.8 1.0 2.2 7.9 19 20 A X - 0 0 97 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.286 53.9-115.8 -51.1 139.8 2.4 2.4 11.4 20 21 A G - 0 0 6 28,-2.1 60,-0.2 59,-0.4 -1,-0.1 -0.037 47.9 -66.2 -67.6 177.5 3.0 -0.9 13.0 21 22 A P - 0 0 58 0, 0.0 60,-2.6 0, 0.0 29,-0.4 -0.207 62.2 -83.3 -63.9 157.9 1.1 -1.9 16.1 22 23 A X - 0 0 100 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.335 54.6-107.0 -55.1 146.6 1.5 -0.3 19.5 23 24 A G - 0 0 7 28,-2.4 60,-0.2 59,-0.4 -1,-0.1 -0.100 41.3 -83.1 -67.7 170.8 4.5 -1.6 21.4 24 25 A P - 0 0 58 0, 0.0 60,-2.2 0, 0.0 29,-0.5 -0.248 60.5 -73.8 -71.3 166.5 4.3 -3.9 24.5 25 26 A X - 0 0 95 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.207 53.2-115.3 -56.2 149.5 3.7 -2.6 28.0 26 27 A G - 0 0 8 28,-2.2 60,-0.2 59,-0.5 -1,-0.1 -0.080 46.4 -68.1 -78.2-173.3 6.6 -0.8 29.7 27 28 A P - 0 0 59 0, 0.0 60,-3.2 0, 0.0 29,-0.6 -0.367 64.4 -85.7 -73.1 157.1 8.4 -2.1 32.8 28 29 A X 0 0 99 58,-0.2 30,-0.2 28,-0.2 31,-0.2 -0.164 360.0 360.0 -56.6 153.2 6.5 -2.2 36.2 29 30 A G 0 0 72 28,-3.2 -1,-0.1 59,-0.3 29,-0.0 -0.208 360.0 360.0 -59.8 360.0 6.5 0.9 38.4 30 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 31 2 B X 0 0 133 0, 0.0 31,-0.2 0, 0.0 32,-0.2 0.000 360.0 360.0 360.0 153.7 3.0 3.0 -36.4 32 3 B G - 0 0 9 29,-2.1 -28,-0.2 -29,-0.5 3,-0.1 0.048 360.0 -70.1 -67.0-172.9 0.4 1.0 -34.6 33 4 B P - 0 0 58 0, 0.0 -28,-1.7 0, 0.0 30,-0.4 -0.318 63.7 -76.1 -76.9 166.2 -1.3 2.2 -31.5 34 5 B X - 0 0 96 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.269 56.1-107.8 -55.7 148.9 0.4 2.5 -28.1 35 6 B G - 0 0 6 29,-2.2 -28,-0.2 -29,-0.4 -1,-0.1 -0.004 47.8 -69.1 -67.2 174.5 0.9 -0.8 -26.3 36 7 B P - 0 0 59 0, 0.0 -28,-2.4 0, 0.0 30,-0.4 -0.222 62.9 -86.3 -60.3 155.2 -1.0 -2.0 -23.2 37 8 B X - 0 0 102 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.332 52.4-103.2 -59.5 150.1 -0.5 -0.2 -19.9 38 9 B G - 0 0 6 29,-2.4 -28,-0.2 -29,-0.3 -1,-0.1 -0.100 42.3 -87.2 -66.6 169.2 2.4 -1.5 -17.8 39 10 B P - 0 0 57 0, 0.0 -28,-2.4 0, 0.0 30,-0.3 -0.279 55.3 -79.1 -73.8 166.0 2.0 -3.8 -14.8 40 11 B X - 0 0 99 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.291 50.8-112.0 -57.8 149.4 1.5 -2.5 -11.3 41 12 B G - 0 0 13 29,-1.8 32,-0.5 -29,-0.4 -29,-0.2 -0.117 41.8 -80.7 -71.1 179.7 4.5 -1.3 -9.3 42 13 B L - 0 0 123 -31,-0.4 -28,-2.3 30,-0.2 30,-0.4 -0.315 57.9 -81.6 -70.8 162.6 6.0 -3.0 -6.3 43 14 B X - 0 0 79 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.311 54.4-104.0 -58.0 151.1 4.5 -2.6 -2.9 44 15 B G - 0 0 5 29,-1.8 -28,-0.2 -29,-0.4 -1,-0.1 -0.135 52.1 -68.8 -71.7 173.8 5.6 0.6 -1.0 45 16 B P - 0 0 65 0, 0.0 -28,-2.3 0, 0.0 30,-0.3 -0.249 64.0 -89.5 -62.6 150.9 8.2 0.6 1.7 46 17 B X - 0 0 103 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.294 52.7-101.2 -57.2 152.1 7.2 -1.1 5.0 47 18 B G - 0 0 7 29,-2.5 -28,-0.2 -29,-0.3 -1,-0.1 -0.148 42.7 -91.7 -66.5 166.3 5.5 1.3 7.4 48 19 B P - 0 0 60 0, 0.0 -28,-2.1 0, 0.0 30,-0.5 -0.300 55.1 -76.6 -73.2 167.0 7.3 2.8 10.4 49 20 B X - 0 0 93 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.276 55.1-108.8 -59.3 149.0 7.4 1.2 13.8 50 21 B G - 0 0 7 29,-2.2 -28,-0.2 -29,-0.4 -1,-0.1 -0.052 45.8 -76.3 -70.9-179.6 4.2 1.7 15.8 51 22 B P - 0 0 58 0, 0.0 -28,-2.4 0, 0.0 30,-0.3 -0.306 59.9 -78.5 -78.3 165.7 4.0 3.9 18.8 52 23 B X - 0 0 93 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.258 53.9-109.8 -56.5 149.2 5.4 3.1 22.2 53 24 B G - 0 0 7 29,-2.1 -28,-0.2 -29,-0.5 3,-0.1 -0.054 44.8 -71.8 -67.3 178.0 3.2 0.7 24.3 54 25 B P - 0 0 59 0, 0.0 -28,-2.2 0, 0.0 30,-0.4 -0.149 61.7 -79.7 -62.0 156.3 1.3 1.6 27.4 55 26 B X - 0 0 94 -30,-0.2 31,-0.2 29,-0.2 32,-0.2 -0.375 55.2-110.2 -52.2 144.6 2.9 2.4 30.8 56 27 B G - 0 0 5 29,-2.3 -28,-0.2 -29,-0.6 -1,-0.1 -0.097 49.9 -66.1 -73.5 177.4 3.9 -0.7 32.6 57 28 B P - 0 0 60 0, 0.0 -28,-3.2 0, 0.0 30,-0.2 -0.113 63.5 -88.8 -65.7 164.1 2.0 -1.9 35.8 58 29 B X 0 0 104 -30,-0.2 29,-0.1 29,-0.2 -30,-0.1 -0.389 360.0 360.0 -67.1 154.7 2.2 0.2 38.9 59 30 B G 0 0 106 29,-3.2 -30,-0.1 -31,-0.2 -1,-0.1 0.010 360.0 360.0 -83.6 360.0 5.0 -0.4 41.4 60 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 61 1 C P 0 0 101 0, 0.0 -29,-2.1 0, 0.0 -59,-0.3 0.000 360.0 360.0 360.0 174.6 5.7 -0.9 -37.7 62 2 C X - 0 0 85 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.127 360.0-107.5 -60.1 156.0 4.5 -1.4 -34.1 63 3 C G - 0 0 7 -60,-2.2 -29,-0.2 -30,-0.4 -1,-0.1 -0.114 45.5 -82.4 -71.0 177.7 3.2 1.3 -31.9 64 4 C P - 0 0 57 0, 0.0 -29,-2.2 0, 0.0 -59,-0.5 -0.341 60.0 -73.4 -77.1 168.8 5.2 2.7 -29.0 65 5 C X - 0 0 91 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.231 57.4-106.8 -55.1 147.9 5.3 1.2 -25.5 66 6 C G - 0 0 8 -60,-2.3 -29,-0.2 -30,-0.4 -1,-0.1 -0.054 46.8 -78.0 -63.7 176.7 2.1 1.7 -23.5 67 7 C P - 0 0 62 0, 0.0 -29,-2.4 0, 0.0 -59,-0.3 -0.291 61.3 -76.3 -73.4 163.7 2.0 4.1 -20.6 68 8 C X - 0 0 101 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.195 52.5-107.3 -54.3 150.7 3.4 3.3 -17.2 69 9 C G - 0 0 10 -60,-2.3 -57,-0.4 -30,-0.3 -29,-0.2 -0.157 43.0 -84.9 -70.4 171.5 1.4 0.9 -14.9 70 10 C P - 0 0 65 0, 0.0 -29,-1.8 0, 0.0 -59,-0.3 -0.353 58.1 -78.8 -73.2 163.1 -0.5 2.1 -11.9 71 11 C X - 0 0 95 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.289 54.2-106.8 -55.8 148.2 1.3 2.6 -8.5 72 12 C G - 0 0 8 -60,-2.4 -30,-0.2 -30,-0.4 -29,-0.2 -0.017 45.9 -72.8 -61.2 171.2 1.9 -0.6 -6.5 73 13 C L - 0 0 120 -32,-0.5 -29,-1.8 -59,-0.2 -59,-0.4 -0.181 61.4 -87.7 -54.7 155.8 0.0 -1.6 -3.4 74 14 C X - 0 0 92 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.343 54.0 -95.0 -59.6 155.8 0.7 0.2 -0.1 75 15 C G - 0 0 6 -60,-2.5 -29,-0.2 -30,-0.3 -1,-0.1 -0.165 45.7 -94.7 -63.5 163.0 3.5 -1.1 1.9 76 16 C P - 0 0 59 0, 0.0 -29,-2.5 0, 0.0 -59,-0.3 -0.382 53.9 -80.7 -73.0 164.1 2.9 -3.6 4.7 77 17 C X - 0 0 99 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.214 51.1-110.9 -60.4 152.5 2.5 -2.4 8.3 78 18 C G - 0 0 9 -60,-2.2 -29,-0.2 -30,-0.5 -1,-0.1 -0.095 42.1 -80.2 -70.4-179.0 5.6 -1.6 10.2 79 19 C P - 0 0 63 0, 0.0 -29,-2.2 0, 0.0 -59,-0.4 -0.302 62.2 -72.8 -71.5 169.1 6.9 -3.6 13.2 80 20 C X - 0 0 97 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.246 56.5-109.1 -57.8 146.3 5.6 -3.2 16.7 81 21 C G - 0 0 7 -60,-2.6 -29,-0.2 -30,-0.3 -1,-0.1 -0.064 44.2 -75.5 -69.2 176.7 6.5 -0.0 18.5 82 22 C P - 0 0 60 0, 0.0 -29,-2.1 0, 0.0 -59,-0.4 -0.338 61.0 -80.9 -68.4 158.2 9.0 0.2 21.4 83 23 C X - 0 0 101 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.224 56.8-109.7 -54.9 147.4 8.0 -0.9 24.9 84 24 C G - 0 0 7 -60,-2.2 -29,-0.2 -30,-0.4 3,-0.1 0.023 44.2 -64.2 -73.6 179.8 6.0 1.7 26.8 85 25 C P - 0 0 58 0, 0.0 -29,-2.3 0, 0.0 -59,-0.5 -0.294 64.3 -82.4 -66.7 152.9 7.0 3.9 29.7 86 26 C X - 0 0 103 -31,-0.2 -58,-0.2 -60,-0.2 -57,-0.2 -0.171 56.9-101.9 -45.5 143.0 7.8 2.5 33.2 87 27 C G 0 0 8 -60,-3.2 -29,-0.2 -30,-0.2 -1,-0.1 -0.193 360.0 360.0 -69.3 168.0 4.7 1.9 35.2 88 28 C P 0 0 101 0, 0.0 -29,-3.2 0, 0.0 -59,-0.3 -0.333 360.0 360.0 -74.5 360.0 3.5 4.3 38.0