==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 08-JAN-00 1DSQ . COMPND 2 MOLECULE: NUCLEIC ACID BINDING PROTEIN P14; . SOURCE 2 ORGANISM_SCIENTIFIC: MOUSE MAMMARY TUMOR VIRUS; . AUTHOR D.J.KLEIN,P.E.JOHNSON,E.S.ZOLLARS,R.N.DE GUZMAN,M.F.SUMMERS . 21 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2152.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 42.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 27 A K 0 0 263 0, 0.0 3,-0.0 0, 0.0 10,-0.0 0.000 360.0 360.0 360.0 136.6 1.3 0.2 -0.7 2 28 A G - 0 0 53 11,-0.1 2,-0.4 1,-0.0 0, 0.0 -0.578 360.0 -24.4-145.5-152.8 1.9 2.8 -3.5 3 29 A P - 0 0 48 0, 0.0 9,-2.6 0, 0.0 10,-2.1 -0.580 57.9-144.7 -75.0 125.9 4.4 4.1 -5.9 4 30 A V B -A 11 0A 89 -2,-0.4 11,-0.8 7,-0.2 2,-0.7 -0.760 8.2-134.0 -94.0 135.9 8.0 3.5 -4.8 5 31 A C > - 0 0 1 5,-3.2 4,-1.3 -2,-0.4 9,-0.1 -0.811 13.8-169.1 -92.5 114.0 10.6 6.1 -5.5 6 32 A F T 4 S+ 0 0 175 -2,-0.7 -1,-0.1 1,-0.2 8,-0.1 0.239 85.8 56.7 -84.4 13.1 13.8 4.5 -6.8 7 33 A S T 4 S+ 0 0 45 3,-0.1 -1,-0.2 0, 0.0 7,-0.0 0.764 128.3 7.8-107.9 -45.9 15.5 7.8 -6.5 8 34 A C T 4 S- 0 0 78 2,-0.1 -2,-0.2 0, 0.0 3,-0.1 0.711 96.7-122.4-106.0 -34.8 15.0 8.6 -2.8 9 35 A G < + 0 0 57 -4,-1.3 -3,-0.1 1,-0.2 2,-0.1 0.702 67.5 126.8 95.6 26.3 13.5 5.3 -1.8 10 36 A K - 0 0 142 -5,-0.1 -5,-3.2 3,-0.1 2,-0.4 -0.372 56.0-112.0-103.3-175.9 10.2 6.8 -0.4 11 37 A T B S+A 4 0A 101 -7,-0.2 -7,-0.2 1,-0.1 3,-0.1 -0.935 83.2 58.6-123.6 145.9 6.6 6.1 -1.1 12 38 A G S S+ 0 0 56 -9,-2.6 2,-0.3 -2,-0.4 -8,-0.2 0.438 104.3 40.3 116.4 8.3 4.0 8.1 -2.9 13 39 A H S S- 0 0 49 -10,-2.1 2,-0.2 -3,-0.2 -1,-0.2 -0.925 75.5-115.5-176.4 154.2 5.7 8.5 -6.2 14 40 A I > - 0 0 72 -2,-0.3 4,-2.1 -9,-0.1 3,-0.4 -0.603 34.3-108.1 -98.3 160.7 7.8 6.7 -8.7 15 41 A K T >4 S+ 0 0 100 -11,-0.8 3,-0.7 1,-0.3 -10,-0.1 0.934 124.8 47.5 -49.5 -53.8 11.4 7.4 -9.7 16 42 A R T 34 S+ 0 0 203 1,-0.3 -1,-0.3 4,-0.0 -11,-0.1 0.800 112.6 50.8 -58.3 -29.9 10.3 8.7 -13.0 17 43 A D T >4 S+ 0 0 75 -3,-0.4 3,-0.7 2,-0.1 2,-0.5 0.746 95.2 86.5 -78.5 -25.6 7.7 10.7 -11.1 18 44 A C T << S- 0 0 23 -4,-2.1 -12,-0.0 -3,-0.7 -5,-0.0 -0.658 115.5 -16.2 -80.0 125.9 10.5 12.0 -8.8 19 45 A K T 3 S+ 0 0 153 -2,-0.5 -1,-0.3 1,-0.1 -2,-0.1 0.928 80.4 164.6 42.3 63.6 12.1 15.1 -10.3 20 46 A E < 0 0 158 -3,-0.7 -1,-0.1 1,-0.2 -2,-0.1 0.807 360.0 360.0 -76.9 -32.1 10.7 14.4 -13.7 21 47 A E 0 0 211 -4,-0.2 -1,-0.2 0, 0.0 -2,-0.1 0.075 360.0 360.0-111.9 360.0 11.4 17.9 -14.9