==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN, PROTEIN BINDING 22-JUN-06 2DS5 . COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR H.K.SONG,E.Y.PARK,B.G.LEE,S.B.HONG . 87 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5832.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 51.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 14.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 26.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 9 A G 0 0 140 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 41.2 0.7 -20.3 -6.7 2 10 A K - 0 0 84 2,-0.0 2,-0.4 0, 0.0 0, 0.0 -0.995 360.0-104.1-152.3 147.8 -0.9 -16.9 -6.2 3 11 A L - 0 0 93 -2,-0.3 2,-0.4 9,-0.1 9,-0.0 -0.611 37.2-165.7 -75.9 127.1 0.0 -13.5 -4.7 4 12 A L - 0 0 59 -2,-0.4 9,-1.4 15,-0.0 2,-0.4 -0.909 4.2-154.9-113.8 141.9 -1.6 -13.1 -1.3 5 13 A Y B -A 12 0A 113 -2,-0.4 7,-0.2 7,-0.2 2,-0.2 -0.909 23.8-107.0-124.3 148.9 -1.8 -9.7 0.4 6 14 A C > - 0 0 3 5,-3.1 4,-1.5 -2,-0.4 21,-0.2 -0.503 27.6-141.7 -65.7 130.4 -2.0 -8.4 4.0 7 15 A S T 4 S+ 0 0 39 19,-2.3 -1,-0.2 -2,-0.2 20,-0.1 0.687 96.2 45.8 -70.0 -17.7 -5.6 -7.1 4.4 8 16 A F T 4 S+ 0 0 29 18,-0.4 -1,-0.2 59,-0.1 19,-0.1 0.901 130.4 11.5 -92.4 -47.9 -4.4 -4.2 6.5 9 17 A C T 4 S- 0 0 63 2,-0.1 -2,-0.1 58,-0.1 18,-0.1 0.586 91.6-124.1-108.9 -14.1 -1.4 -2.8 4.6 10 18 A G < + 0 0 40 -4,-1.5 2,-0.1 1,-0.3 -3,-0.1 0.466 57.7 143.2 86.9 0.1 -1.5 -4.5 1.3 11 19 A K - 0 0 71 -6,-0.1 -5,-3.1 1,-0.1 -1,-0.3 -0.480 46.6-124.1 -74.2 146.9 2.0 -6.0 1.2 12 20 A S B >> -A 5 0A 10 -7,-0.2 3,-1.9 -2,-0.1 4,-0.7 -0.324 26.8-100.5 -84.9 171.9 2.3 -9.5 -0.3 13 21 A Q T 34 S+ 0 0 54 -9,-1.4 3,-0.1 1,-0.3 -8,-0.1 0.708 123.3 61.2 -64.5 -17.4 3.7 -12.6 1.3 14 22 A H T 34 S+ 0 0 140 -10,-0.3 -1,-0.3 1,-0.2 -9,-0.1 0.486 103.1 48.9 -87.7 -3.8 6.9 -11.9 -0.7 15 23 A E T <4 S+ 0 0 119 -3,-1.9 2,-0.3 3,-0.0 -2,-0.2 0.513 108.3 58.1-109.5 -11.6 7.4 -8.5 1.1 16 24 A V S < S- 0 0 18 -4,-0.7 3,-0.1 -3,-0.1 12,-0.0 -0.787 77.3-124.1-121.9 164.2 6.9 -9.7 4.7 17 25 A R S S+ 0 0 204 1,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.862 97.1 4.1 -71.7 -36.1 8.4 -12.2 7.1 18 26 A K - 0 0 58 2,-0.0 11,-1.6 -3,-0.0 2,-0.6 -0.983 55.6-158.5-154.7 139.2 5.1 -13.9 7.7 19 27 A L E -B 28 0B 33 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.935 19.1-154.9-121.3 105.8 1.5 -13.6 6.4 20 28 A I E -B 27 0B 18 7,-2.8 7,-2.2 -2,-0.6 2,-0.4 -0.662 10.8-141.3 -84.5 130.5 -1.0 -15.0 8.8 21 29 A A E -B 26 0B 62 -2,-0.4 5,-0.3 5,-0.2 -15,-0.0 -0.771 15.5-172.4-100.0 133.7 -4.3 -16.2 7.3 22 30 A G - 0 0 18 3,-3.4 31,-0.1 -2,-0.4 32,-0.1 -0.357 55.7 -76.3-100.7-172.1 -7.7 -15.8 8.9 23 31 A P S S- 0 0 108 0, 0.0 30,-0.1 0, 0.0 -2,-0.0 0.907 124.8 -6.5 -55.3 -43.4 -10.8 -17.5 7.3 24 32 A S S S+ 0 0 112 28,-0.5 2,-0.3 2,-0.0 29,-0.1 0.099 129.1 60.8-140.6 21.8 -11.0 -15.0 4.5 25 33 A V - 0 0 19 27,-0.1 -3,-3.4 28,-0.1 2,-0.3 -0.862 58.9-145.7-142.8 175.3 -8.4 -12.4 5.5 26 34 A Y E -B 21 0B 70 -2,-0.3 -19,-2.3 -5,-0.3 -18,-0.4 -0.987 5.4-168.8-145.8 152.1 -4.6 -12.0 6.1 27 35 A I E -B 20 0B 0 -7,-2.2 -7,-2.8 -2,-0.3 2,-0.1 -0.989 17.1-140.4-143.6 133.5 -2.3 -9.9 8.4 28 36 A C E > -B 19 0B 0 -2,-0.3 4,-1.9 -9,-0.2 -9,-0.2 -0.432 28.6-106.2 -90.5 168.6 1.4 -9.6 8.1 29 37 A D H > S+ 0 0 13 -11,-1.6 4,-2.3 1,-0.2 5,-0.1 0.814 118.4 57.2 -62.5 -31.8 4.0 -9.5 10.8 30 38 A E H > S+ 0 0 70 -12,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.917 108.8 45.0 -67.2 -41.9 4.6 -5.8 10.4 31 39 A C H > S+ 0 0 14 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.835 111.1 53.1 -70.7 -31.3 0.9 -5.1 11.0 32 40 A V H X S+ 0 0 1 -4,-1.9 4,-2.0 2,-0.2 -2,-0.2 0.923 108.2 52.0 -66.6 -41.1 0.9 -7.4 14.0 33 41 A D H X S+ 0 0 100 -4,-2.3 4,-1.3 1,-0.2 -2,-0.2 0.927 111.0 46.6 -57.8 -46.9 3.8 -5.4 15.2 34 42 A L H X S+ 0 0 97 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.880 107.6 57.4 -64.0 -38.6 1.8 -2.2 14.8 35 43 A C H X S+ 0 0 4 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.871 101.8 56.0 -60.9 -36.7 -1.2 -3.9 16.5 36 44 A N H X S+ 0 0 9 -4,-2.0 4,-3.0 1,-0.2 5,-0.2 0.897 106.6 49.7 -63.7 -38.4 1.0 -4.5 19.6 37 45 A D H X>S+ 0 0 51 -4,-1.3 5,-1.3 2,-0.2 4,-1.2 0.889 112.3 48.3 -65.8 -39.3 1.8 -0.8 19.8 38 46 A I H <5S+ 0 0 71 -4,-2.0 -2,-0.2 2,-0.2 -1,-0.2 0.938 117.5 40.1 -65.8 -48.0 -1.9 0.1 19.5 39 47 A I H <5S+ 0 0 48 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.923 123.0 39.2 -68.0 -45.9 -3.0 -2.4 22.1 40 48 A R H <5S- 0 0 109 -4,-3.0 -1,-0.2 -5,-0.2 -2,-0.2 0.609 101.2-136.5 -80.2 -12.1 -0.1 -1.7 24.5 41 49 A E T <5 + 0 0 159 -4,-1.2 2,-0.3 -5,-0.2 -3,-0.2 0.959 61.6 117.7 53.2 57.8 -0.3 2.0 23.7 42 50 A E < 0 0 101 -5,-1.3 -1,-0.2 -6,-0.1 -2,-0.1 -0.982 360.0 360.0-150.6 157.5 3.5 2.3 23.4 43 51 A I 0 0 227 -2,-0.3 -5,-0.0 -3,-0.1 0, 0.0 -0.980 360.0 360.0-120.5 360.0 6.2 3.2 21.0 44 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 45 8 B S 0 0 167 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 130.0 -23.5 4.3 14.8 46 9 B G + 0 0 88 1,-0.2 2,-0.1 0, 0.0 0, 0.0 0.340 360.0 139.6 72.7 -7.2 -24.5 1.4 17.1 47 10 B K - 0 0 87 1,-0.1 2,-0.4 0, 0.0 -1,-0.2 -0.384 56.0-113.7 -73.5 146.6 -23.5 -1.2 14.5 48 11 B L - 0 0 83 -3,-0.1 2,-0.4 -2,-0.1 -1,-0.1 -0.642 27.5-161.8 -81.4 130.2 -21.7 -4.4 15.5 49 12 B L - 0 0 67 -2,-0.4 9,-1.6 15,-0.0 2,-0.3 -0.901 8.2-156.4-110.7 140.3 -18.2 -4.8 14.3 50 13 B Y B -C 57 0C 120 -2,-0.4 2,-0.3 7,-0.2 7,-0.2 -0.904 24.0-109.3-121.6 149.1 -16.5 -8.2 14.2 51 14 B C > - 0 0 2 5,-3.0 4,-1.6 -2,-0.3 21,-0.2 -0.589 26.5-143.2 -70.0 128.9 -13.0 -9.4 14.3 52 15 B S T 4 S+ 0 0 37 19,-2.4 -28,-0.5 -2,-0.3 20,-0.2 0.633 94.6 48.2 -70.6 -13.4 -12.3 -10.8 10.8 53 16 B F T 4 S+ 0 0 27 18,-0.4 -1,-0.2 -31,-0.1 19,-0.1 0.874 128.6 11.8 -95.9 -43.3 -10.2 -13.6 12.2 54 17 B C T 4 S- 0 0 64 2,-0.1 -2,-0.1 -32,-0.1 18,-0.1 0.577 92.4-123.5-111.6 -14.7 -12.2 -15.1 15.1 55 18 B G < + 0 0 41 -4,-1.6 2,-0.1 1,-0.3 -3,-0.1 0.456 58.2 143.4 88.0 -0.4 -15.6 -13.6 14.6 56 19 B K - 0 0 75 -6,-0.1 -5,-3.0 1,-0.1 -1,-0.3 -0.459 47.7-122.7 -73.8 147.4 -16.0 -12.0 18.0 57 20 B S B > -C 50 0C 11 -7,-0.2 3,-1.8 -2,-0.1 4,-0.5 -0.342 28.8-100.6 -82.8 169.9 -17.8 -8.6 18.2 58 21 B Q T 3 S+ 0 0 53 -9,-1.6 3,-0.2 1,-0.3 -8,-0.1 0.671 123.2 59.1 -65.9 -14.6 -16.2 -5.5 19.7 59 22 B H T 3 S+ 0 0 143 -10,-0.2 -1,-0.3 1,-0.2 -3,-0.0 0.546 102.1 53.6 -89.5 -8.0 -18.2 -6.1 22.9 60 23 B E S < S+ 0 0 117 -3,-1.8 2,-0.3 3,-0.0 -2,-0.2 0.448 108.8 50.7-103.6 -3.9 -16.6 -9.5 23.4 61 24 B V S S- 0 0 19 -4,-0.5 3,-0.1 -3,-0.2 12,-0.0 -0.835 79.3-120.1-130.7 168.2 -13.0 -8.3 23.2 62 25 B R S S+ 0 0 232 1,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.917 95.3 3.1 -73.4 -45.5 -10.8 -5.6 24.8 63 26 B K - 0 0 65 -3,-0.1 11,-1.6 2,-0.0 2,-0.5 -1.000 55.6-158.2-146.8 144.0 -9.9 -3.9 21.5 64 27 B L E -D 73 0D 33 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.973 16.9-153.0-123.5 112.8 -10.8 -4.3 17.9 65 28 B I E -D 72 0D 16 7,-3.1 7,-2.0 -2,-0.5 2,-0.4 -0.752 13.0-143.7 -89.9 129.1 -8.2 -2.8 15.5 66 29 B A E +D 71 0D 66 -2,-0.5 5,-0.2 5,-0.2 -15,-0.0 -0.762 22.9 169.9-100.8 136.8 -9.6 -1.6 12.1 67 30 B G E > -D 70 0D 22 3,-3.4 2,-1.1 -2,-0.4 3,-0.9 -0.461 62.3 -48.2-119.8-166.6 -8.0 -1.8 8.7 68 31 B P T 3 S- 0 0 91 0, 0.0 3,-0.1 0, 0.0 -59,-0.0 -0.578 123.1 -28.7 -73.2 101.4 -9.6 -1.2 5.3 69 32 B S T 3 S+ 0 0 122 -2,-1.1 2,-0.3 1,-0.2 -61,-0.0 0.864 127.3 90.4 59.7 38.9 -12.8 -3.2 5.6 70 33 B V E < -D 67 0D 2 -3,-0.9 -3,-3.4 -62,-0.0 2,-0.3 -0.976 53.9-163.6-158.0 153.1 -11.1 -5.7 8.0 71 34 B Y E -D 66 0D 65 -2,-0.3 -19,-2.4 -5,-0.2 -18,-0.4 -0.985 5.6-169.5-143.0 152.5 -10.7 -6.0 11.8 72 35 B I E -D 65 0D 0 -7,-2.0 -7,-3.1 -2,-0.3 2,-0.1 -0.991 16.0-141.9-144.2 134.1 -8.6 -7.9 14.3 73 36 B C E > -D 64 0D 0 -2,-0.3 4,-1.8 -9,-0.2 -9,-0.2 -0.441 29.5-105.1 -92.1 168.5 -9.0 -8.2 18.1 74 37 B D H > S+ 0 0 7 -11,-1.6 4,-2.0 1,-0.2 5,-0.1 0.810 118.6 56.2 -61.3 -32.4 -6.5 -8.2 20.9 75 38 B E H > S+ 0 0 80 -12,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.902 108.8 45.5 -68.5 -41.0 -6.9 -12.0 21.4 76 39 B C H > S+ 0 0 15 2,-0.2 4,-2.5 1,-0.2 -2,-0.2 0.829 110.1 55.1 -71.5 -30.1 -6.1 -12.8 17.7 77 40 B V H X S+ 0 0 0 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.914 105.7 52.6 -66.8 -40.5 -3.1 -10.4 17.9 78 41 B D H X S+ 0 0 86 -4,-2.0 4,-1.5 1,-0.2 -2,-0.2 0.910 110.3 47.9 -59.6 -42.2 -1.9 -12.4 20.9 79 42 B L H X S+ 0 0 98 -4,-1.7 4,-2.1 1,-0.2 -1,-0.2 0.909 107.6 55.2 -65.0 -41.9 -2.2 -15.5 18.8 80 43 B C H X S+ 0 0 4 -4,-2.5 4,-2.9 1,-0.2 5,-0.2 0.877 103.6 56.3 -58.8 -37.5 -0.4 -13.9 15.9 81 44 B N H X S+ 0 0 7 -4,-2.1 4,-2.8 1,-0.2 -1,-0.2 0.908 107.0 48.2 -62.0 -41.1 2.5 -13.1 18.3 82 45 B D H X>S+ 0 0 60 -4,-1.5 5,-1.5 2,-0.2 4,-1.2 0.890 112.6 49.8 -65.6 -38.0 2.8 -16.8 19.2 83 46 B I H <5S+ 0 0 67 -4,-2.1 -2,-0.2 2,-0.2 -1,-0.2 0.921 115.5 41.5 -66.5 -44.3 2.8 -17.6 15.5 84 47 B I H <5S+ 0 0 49 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.913 120.7 41.6 -70.3 -43.5 5.4 -15.1 14.6 85 48 B R H <5S- 0 0 113 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.644 101.3-137.8 -78.2 -14.8 7.6 -15.8 17.6 86 49 B E T <5 + 0 0 154 -4,-1.2 2,-0.3 -5,-0.2 -3,-0.2 0.941 62.4 113.0 55.4 52.0 7.0 -19.6 17.1 87 50 B E < 0 0 105 -5,-1.5 -1,-0.2 -6,-0.1 -2,-0.1 -0.950 360.0 360.0-147.4 164.8 6.6 -20.1 20.8 88 51 B I 0 0 221 -2,-0.3 -5,-0.0 -3,-0.1 0, 0.0 -0.991 360.0 360.0-126.5 360.0 4.0 -21.0 23.5