==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN, PROTEIN BINDING 22-JUN-06 2DS6 . COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR E.Y.PARK,B.G.LEE,S.B.HONG,H.K.SONG . 83 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5545.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 44 53.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 27.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 10 A K 0 0 132 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.9 -9.9 3.8 4.7 2 11 A L - 0 0 96 9,-0.1 2,-0.4 10,-0.1 9,-0.0 -0.598 360.0-175.5 -77.1 125.0 -8.7 7.4 5.4 3 12 A L - 0 0 69 -2,-0.4 9,-1.2 0, 0.0 2,-0.4 -0.957 8.7-154.0-119.5 138.5 -6.3 7.7 8.3 4 13 A Y B -A 11 0A 113 -2,-0.4 7,-0.2 7,-0.2 2,-0.2 -0.915 21.3-115.0-122.6 142.9 -5.0 11.0 9.5 5 14 A C > - 0 0 2 5,-3.1 4,-1.5 -2,-0.4 21,-0.2 -0.531 26.7-140.7 -66.2 131.7 -1.9 12.2 11.3 6 15 A S T 4 S+ 0 0 35 19,-2.3 59,-0.4 -2,-0.2 -1,-0.2 0.654 95.2 46.0 -71.3 -16.2 -3.2 13.6 14.6 7 16 A F T 4 S+ 0 0 30 18,-0.3 -1,-0.2 56,-0.2 19,-0.1 0.869 128.8 14.5 -95.3 -44.0 -0.7 16.5 14.5 8 17 A C T 4 S- 0 0 64 2,-0.1 -2,-0.1 55,-0.1 18,-0.1 0.585 92.4-125.4-108.3 -15.2 -0.9 17.9 11.0 9 18 A G < + 0 0 42 -4,-1.5 2,-0.1 1,-0.3 -3,-0.1 0.525 57.8 143.1 85.6 3.3 -4.1 16.3 9.7 10 19 A K - 0 0 65 -6,-0.1 -5,-3.1 1,-0.1 -1,-0.3 -0.444 45.0-125.2 -76.5 154.0 -2.6 14.8 6.6 11 20 A S B >> -A 4 0A 11 -7,-0.2 3,-1.9 -2,-0.1 4,-1.1 -0.448 28.5 -99.5 -93.8 170.3 -3.8 11.4 5.4 12 21 A Q T 34 S+ 0 0 55 -9,-1.2 3,-0.1 1,-0.3 -8,-0.1 0.794 124.6 59.1 -58.6 -28.1 -1.7 8.3 4.6 13 22 A H T 34 S+ 0 0 139 -10,-0.2 -1,-0.3 1,-0.2 -11,-0.0 0.666 105.5 50.2 -75.0 -15.7 -1.9 9.2 0.9 14 23 A E T <4 S+ 0 0 111 -3,-1.9 2,-0.2 2,-0.0 -2,-0.2 0.692 109.6 48.5 -94.9 -23.3 -0.2 12.5 1.7 15 24 A V S < S- 0 0 15 -4,-1.1 3,-0.1 -3,-0.1 12,-0.0 -0.714 75.4-124.3-117.3 168.7 2.8 11.3 3.8 16 25 A R S S+ 0 0 226 1,-0.3 2,-0.3 -2,-0.2 -1,-0.1 0.875 94.7 10.1 -77.7 -39.6 5.5 8.7 3.4 17 26 A K - 0 0 71 2,-0.0 11,-1.5 -3,-0.0 2,-0.6 -0.982 56.7-162.6-148.7 133.9 4.8 7.0 6.7 18 27 A L E -B 27 0B 35 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.958 17.5-151.4-115.9 115.1 2.0 7.2 9.3 19 28 A I E -B 26 0B 15 7,-2.9 7,-1.2 -2,-0.6 2,-0.2 -0.765 14.7-133.3 -92.5 126.4 2.9 5.7 12.8 20 29 A A E +B 25 0B 68 -2,-0.5 5,-0.2 5,-0.2 3,-0.0 -0.504 23.7 177.5 -83.7 142.9 0.1 4.3 14.8 21 30 A G - 0 0 17 3,-3.0 28,-0.2 -2,-0.2 29,-0.1 -0.683 56.9 -72.1-124.8 178.9 -0.6 4.9 18.5 22 31 A P S S- 0 0 101 0, 0.0 27,-0.1 0, 0.0 -2,-0.0 0.904 123.7 -14.4 -40.7 -60.9 -3.5 3.6 20.6 23 32 A S S S+ 0 0 116 25,-0.4 2,-0.3 -3,-0.0 26,-0.1 0.029 129.3 75.5-133.2 24.9 -6.1 5.9 18.9 24 33 A V - 0 0 19 24,-0.2 -3,-3.0 25,-0.1 2,-0.3 -0.817 54.6-155.4-135.1 172.9 -3.6 8.3 17.3 25 34 A Y E -B 20 0B 66 -2,-0.3 -19,-2.3 -5,-0.2 -18,-0.3 -0.967 2.7-169.4-146.2 156.4 -1.2 8.8 14.4 26 35 A I E -B 19 0B 0 -7,-1.2 -7,-2.9 -2,-0.3 2,-0.1 -0.959 18.5-140.9-149.1 131.3 1.9 10.9 13.6 27 36 A C E > -B 18 0B 0 -2,-0.3 4,-1.9 -9,-0.2 3,-0.4 -0.442 29.5-103.2 -92.5 169.3 3.5 11.2 10.2 28 37 A D H > S+ 0 0 15 -11,-1.5 4,-1.8 1,-0.2 5,-0.1 0.765 119.3 59.0 -60.4 -28.6 7.1 11.3 9.2 29 38 A E H > S+ 0 0 69 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.907 107.3 43.9 -69.8 -42.3 6.8 15.1 8.6 30 39 A C H > S+ 0 0 12 -3,-0.4 4,-2.5 2,-0.2 -2,-0.2 0.832 108.5 59.4 -72.4 -29.6 5.7 15.8 12.2 31 40 A V H X S+ 0 0 2 -4,-1.9 4,-2.3 2,-0.2 -1,-0.2 0.927 102.8 52.3 -62.1 -43.1 8.4 13.4 13.4 32 41 A D H X S+ 0 0 93 -4,-1.8 4,-1.7 1,-0.2 -1,-0.2 0.912 110.0 49.8 -57.5 -41.3 11.0 15.6 11.7 33 42 A L H X S+ 0 0 107 -4,-1.4 4,-2.0 1,-0.2 -1,-0.2 0.900 107.9 52.6 -64.0 -41.8 9.4 18.5 13.6 34 43 A C H X S+ 0 0 4 -4,-2.5 4,-2.6 1,-0.2 5,-0.2 0.869 105.7 55.1 -63.3 -36.4 9.6 16.6 16.9 35 44 A N H X S+ 0 0 9 -4,-2.3 4,-3.1 2,-0.2 5,-0.3 0.918 107.3 48.6 -63.4 -43.0 13.3 16.0 16.4 36 45 A D H X>S+ 0 0 71 -4,-1.7 5,-1.5 1,-0.2 4,-1.1 0.904 113.1 49.5 -62.4 -40.4 14.1 19.7 15.9 37 46 A I H <5S+ 0 0 76 -4,-2.0 -2,-0.2 2,-0.2 -1,-0.2 0.894 116.5 39.7 -65.1 -44.1 12.1 20.4 19.1 38 47 A I H <5S+ 0 0 54 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.919 122.7 40.4 -73.9 -44.2 13.8 17.8 21.2 39 48 A R H <5S- 0 0 129 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.590 101.2-137.2 -79.5 -11.5 17.3 18.5 19.8 40 49 A E T <5 + 0 0 155 -4,-1.1 2,-0.3 -5,-0.3 -3,-0.2 0.966 64.5 108.6 50.9 59.2 16.6 22.2 19.9 41 50 A E < 0 0 142 -5,-1.5 -1,-0.2 -6,-0.1 -2,-0.1 -0.978 360.0 360.0-157.0 161.2 18.1 22.7 16.4 42 51 A I 0 0 190 -2,-0.3 -5,-0.0 -3,-0.1 0, 0.0 -0.913 360.0 360.0-110.8 360.0 17.2 23.4 12.8 43 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 44 11 B L 0 0 123 0, 0.0 2,-0.4 0, 0.0 9,-0.0 0.000 360.0 360.0 360.0 164.6 -2.5 15.9 33.8 45 12 B L - 0 0 77 15,-0.0 9,-1.8 3,-0.0 2,-0.3 -0.856 360.0-167.4-104.8 140.4 -1.3 15.6 30.2 46 13 B Y B -C 53 0C 119 -2,-0.4 2,-0.3 7,-0.2 7,-0.2 -0.955 32.5 -99.5-130.1 149.4 -0.1 12.2 28.9 47 14 B C > - 0 0 2 5,-3.0 4,-1.8 -2,-0.3 21,-0.2 -0.505 31.1-143.0 -62.9 125.1 1.8 11.1 25.9 48 15 B S T 4 S+ 0 0 35 19,-2.1 -25,-0.4 -2,-0.3 -1,-0.2 0.619 94.7 49.1 -68.2 -11.5 -1.0 9.8 23.6 49 16 B F T 4 S+ 0 0 27 18,-0.4 -1,-0.2 -28,-0.2 19,-0.1 0.882 127.4 12.8 -96.1 -45.0 1.3 7.0 22.5 50 17 B C T 4 S- 0 0 62 2,-0.1 -2,-0.2 -29,-0.1 18,-0.1 0.574 92.9-124.8-108.2 -15.7 2.9 5.4 25.6 51 18 B G < + 0 0 43 -4,-1.8 -3,-0.1 1,-0.3 2,-0.1 0.404 57.0 145.5 88.5 -3.9 0.7 6.9 28.2 52 19 B K - 0 0 75 -6,-0.1 -5,-3.0 1,-0.1 -1,-0.3 -0.400 47.4-118.6 -68.4 145.8 3.4 8.4 30.4 53 20 B S B > -C 46 0C 8 -7,-0.2 3,-1.2 1,-0.1 4,-0.5 -0.275 25.7-102.8 -79.8 169.0 2.5 11.7 32.1 54 21 B Q T 3 S+ 0 0 58 -9,-1.8 3,-0.2 1,-0.3 -8,-0.1 0.647 122.8 59.4 -66.5 -11.4 4.2 15.0 31.6 55 22 B H T 3 S+ 0 0 142 -10,-0.2 -1,-0.3 1,-0.2 -9,-0.1 0.706 102.6 50.8 -86.8 -22.8 5.9 14.3 35.0 56 23 B E S < S+ 0 0 122 -3,-1.2 2,-0.3 3,-0.0 -2,-0.2 0.399 103.5 62.9 -98.1 2.1 7.6 11.1 33.8 57 24 B V S S- 0 0 21 -4,-0.5 3,-0.1 -3,-0.2 12,-0.0 -0.835 74.4-126.0-127.8 165.5 9.2 12.3 30.5 58 25 B R S S+ 0 0 225 1,-0.3 2,-0.3 -2,-0.3 -1,-0.1 0.874 95.0 3.4 -74.4 -39.0 11.8 14.8 29.3 59 26 B K - 0 0 68 -3,-0.0 11,-1.5 2,-0.0 2,-0.5 -0.985 55.4-158.3-154.2 139.2 9.5 16.5 26.9 60 27 B L E -D 69 0D 37 -2,-0.3 2,-0.5 9,-0.2 9,-0.2 -0.968 16.5-155.3-118.8 114.1 5.9 16.3 25.8 61 28 B I E -D 68 0D 17 7,-3.2 7,-2.0 -2,-0.5 2,-0.3 -0.799 13.7-143.0 -94.5 128.2 5.1 17.7 22.4 62 29 B A E +D 67 0D 65 -2,-0.5 5,-0.2 5,-0.2 -15,-0.0 -0.663 19.0 179.4 -96.8 144.8 1.6 18.9 21.8 63 30 B G - 0 0 19 3,-3.5 3,-0.3 -2,-0.3 -56,-0.2 -0.579 61.0 -59.3-123.0-174.1 -0.7 18.6 18.7 64 31 B P S S- 0 0 107 0, 0.0 -57,-0.1 0, 0.0 -2,-0.0 0.847 126.9 -23.7 -35.6 -51.8 -4.3 19.8 18.2 65 32 B S S S+ 0 0 109 -59,-0.4 2,-0.3 2,-0.0 -58,-0.1 -0.089 125.8 84.3-157.0 39.2 -5.4 17.6 21.1 66 33 B V - 0 0 3 -3,-0.3 -3,-3.5 -60,-0.1 2,-0.3 -0.945 54.1-155.3-143.3 159.6 -2.7 14.9 21.2 67 34 B Y E -D 62 0D 59 -2,-0.3 -19,-2.1 -5,-0.2 -18,-0.4 -0.971 4.8-168.7-138.9 152.4 0.8 14.6 22.7 68 35 B I E -D 61 0D 0 -7,-2.0 -7,-3.2 -2,-0.3 2,-0.1 -0.994 16.8-139.7-142.9 135.0 3.9 12.6 22.1 69 36 B C E > -D 60 0D 0 -2,-0.4 4,-1.9 -9,-0.2 -9,-0.2 -0.463 28.1-105.9 -93.6 167.3 6.9 12.2 24.4 70 37 B D H > S+ 0 0 21 -11,-1.5 4,-1.4 1,-0.2 5,-0.1 0.791 118.6 55.7 -59.3 -31.7 10.7 12.2 23.6 71 38 B E H > S+ 0 0 77 -12,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.938 108.6 44.9 -69.1 -47.0 10.8 8.4 24.2 72 39 B C H > S+ 0 0 12 1,-0.2 4,-2.0 2,-0.2 -2,-0.2 0.819 108.1 58.9 -67.2 -29.8 8.1 7.7 21.6 73 40 B V H X S+ 0 0 2 -4,-1.9 4,-2.0 1,-0.2 -1,-0.2 0.885 102.9 53.6 -65.8 -35.8 9.8 10.1 19.2 74 41 B D H X S+ 0 0 92 -4,-1.4 4,-1.6 1,-0.2 -1,-0.2 0.887 107.9 49.8 -65.0 -37.9 12.9 7.9 19.5 75 42 B L H X S+ 0 0 97 -4,-1.4 4,-2.5 1,-0.2 -1,-0.2 0.864 107.1 55.1 -68.0 -34.9 10.8 4.9 18.5 76 43 B C H X S+ 0 0 4 -4,-2.0 4,-3.2 1,-0.2 5,-0.2 0.888 105.2 53.1 -65.1 -36.8 9.4 6.8 15.6 77 44 B N H X S+ 0 0 10 -4,-2.0 4,-2.8 2,-0.2 -1,-0.2 0.887 109.6 48.0 -66.4 -36.5 13.0 7.5 14.4 78 45 B D H X>S+ 0 0 51 -4,-1.6 4,-1.3 2,-0.2 5,-1.3 0.943 113.9 47.6 -67.0 -45.3 13.7 3.7 14.5 79 46 B I H <5S+ 0 0 81 -4,-2.5 -2,-0.2 2,-0.2 -1,-0.2 0.937 117.3 41.5 -59.9 -48.4 10.5 3.0 12.7 80 47 B I H <5S+ 0 0 49 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.928 121.4 39.8 -68.0 -44.7 11.2 5.6 10.0 81 48 B R H <5S- 0 0 105 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.553 99.9-135.8 -82.1 -7.3 14.9 4.9 9.6 82 49 B E T <5 + 0 0 161 -4,-1.3 2,-0.3 1,-0.2 -3,-0.2 0.950 66.1 109.5 49.2 55.8 14.3 1.1 9.9 83 50 B E < 0 0 110 -5,-1.3 -1,-0.2 -6,-0.1 -2,-0.2 -0.981 360.0 360.0-154.3 158.5 17.3 0.8 12.2 84 51 B I 0 0 209 -2,-0.3 -6,-0.0 -3,-0.1 0, 0.0 -0.939 360.0 360.0-113.4 360.0 18.1 0.0 15.9