==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN, PROTEIN BINDING 22-JUN-06 2DS7 . COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR E.Y.PARK,B.G.LEE,S.B.HONG,H.K.SONG . 40 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3138.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 55.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A L 0 0 112 0, 0.0 9,-2.1 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 124.8 43.7 13.2 30.5 2 13 A Y B -A 9 0A 149 7,-0.2 2,-0.6 8,-0.1 7,-0.2 -0.922 360.0 -96.9-132.6 157.7 40.6 11.2 29.4 3 14 A C > - 0 0 2 5,-2.9 4,-2.8 -2,-0.3 3,-0.3 -0.615 25.2-146.9 -76.0 118.9 37.5 11.9 27.3 4 15 A S T 4 S+ 0 0 69 19,-2.2 -1,-0.2 -2,-0.6 20,-0.1 0.486 97.0 46.0 -63.4 -1.3 34.6 12.7 29.6 5 16 A F T 4 S+ 0 0 117 18,-0.5 -1,-0.2 3,-0.1 19,-0.1 0.745 130.8 10.9-112.8 -32.7 32.4 10.9 27.1 6 17 A C T 4 S- 0 0 57 -3,-0.3 -2,-0.2 2,-0.2 3,-0.1 0.322 89.6-126.6-128.0 1.6 34.1 7.7 26.1 7 18 A G < + 0 0 44 -4,-2.8 -3,-0.1 1,-0.2 0, 0.0 0.242 56.7 146.2 72.6 -15.8 36.9 7.4 28.7 8 19 A K - 0 0 69 -6,-0.2 -5,-2.9 1,-0.1 -1,-0.2 -0.170 46.3-116.3 -54.1 148.1 39.6 7.0 26.1 9 20 A S B > -A 2 0A 25 -7,-0.2 4,-0.9 -3,-0.1 3,-0.3 -0.334 26.3 -95.3 -87.5 169.3 42.9 8.6 27.1 10 21 A Q T 4 S+ 0 0 70 -9,-2.1 3,-0.2 1,-0.2 -8,-0.1 0.762 126.5 45.9 -49.3 -30.3 45.0 11.4 25.6 11 22 A H T 4 S+ 0 0 91 -10,-0.2 -1,-0.2 1,-0.2 -9,-0.1 0.844 101.7 62.0 -85.4 -37.7 47.0 8.7 23.7 12 23 A E T 4 S+ 0 0 118 -3,-0.3 2,-0.3 2,-0.0 -2,-0.2 0.586 104.4 52.3 -67.3 -11.7 44.1 6.5 22.4 13 24 A V S < S- 0 0 15 -4,-0.9 3,-0.1 -3,-0.2 12,-0.0 -0.800 79.4-120.9-125.5 168.6 42.6 9.3 20.3 14 25 A R S S+ 0 0 88 -2,-0.3 2,-0.3 1,-0.2 -1,-0.1 0.937 92.6 3.2 -71.6 -50.0 43.7 11.9 17.6 15 26 A K - 0 0 144 2,-0.0 11,-1.6 0, 0.0 2,-0.5 -0.986 57.1-155.7-141.1 151.8 42.7 15.0 19.5 16 27 A L E -B 25 0B 39 -2,-0.3 2,-0.2 9,-0.2 9,-0.2 -0.978 15.3-152.8-131.3 116.9 41.4 16.0 22.9 17 28 A I E -B 24 0B 83 7,-2.6 7,-1.3 -2,-0.5 2,-0.5 -0.616 14.8-125.5 -89.7 148.7 39.5 19.2 23.4 18 29 A A E -B 23 0B 75 -2,-0.2 5,-0.2 5,-0.2 4,-0.1 -0.821 31.4-178.8 -96.7 127.0 39.3 21.1 26.7 19 30 A G - 0 0 28 3,-2.4 0, 0.0 -2,-0.5 0, 0.0 -0.454 52.9 -69.4-111.8-172.7 35.9 22.0 28.0 20 31 A P S S- 0 0 148 0, 0.0 3,-0.1 0, 0.0 -2,-0.0 0.697 120.4 -35.8 -50.2 -21.1 34.6 23.8 31.1 21 32 A S S S+ 0 0 62 1,-0.1 -17,-0.0 0, 0.0 0, 0.0 0.155 127.3 85.8-173.0 -29.0 35.9 20.8 33.0 22 33 A V - 0 0 54 -4,-0.1 -3,-2.4 -19,-0.0 2,-0.3 -0.025 65.4-133.9 -78.0-178.2 35.2 17.9 30.7 23 34 A Y E -B 18 0B 74 -5,-0.2 -19,-2.2 -3,-0.1 -18,-0.5 -0.966 14.1-167.4-144.7 123.5 37.3 16.6 27.8 24 35 A I E -B 17 0B 23 -7,-1.3 -7,-2.6 -2,-0.3 2,-0.1 -0.962 9.9-153.4-117.4 120.7 35.8 15.7 24.4 25 36 A C E > -B 16 0B 0 -2,-0.5 4,-1.6 -9,-0.2 -9,-0.2 -0.402 32.1-102.7 -87.3 167.6 37.9 13.7 21.9 26 37 A D H > S+ 0 0 46 -11,-1.6 4,-2.4 1,-0.2 5,-0.2 0.866 118.8 57.6 -56.5 -39.9 37.5 13.7 18.1 27 38 A E H > S+ 0 0 77 1,-0.2 4,-2.2 -12,-0.2 -1,-0.2 0.939 107.5 45.6 -58.4 -49.2 35.7 10.4 18.0 28 39 A C H > S+ 0 0 13 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.783 110.3 55.0 -66.8 -26.2 32.9 11.7 20.3 29 40 A V H X S+ 0 0 57 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.927 107.4 49.2 -71.8 -42.9 32.6 14.9 18.3 30 41 A D H X S+ 0 0 103 -4,-2.4 4,-1.9 2,-0.2 -2,-0.2 0.937 113.6 48.5 -58.1 -45.0 32.1 12.9 15.1 31 42 A L H X S+ 0 0 95 -4,-2.2 4,-2.7 1,-0.2 3,-0.4 0.966 109.2 49.4 -59.4 -55.9 29.4 10.9 17.0 32 43 A X H X S+ 0 0 65 -4,-2.9 4,-2.4 1,-0.3 -1,-0.2 0.821 108.1 57.7 -53.6 -31.3 27.7 14.0 18.4 33 44 A N H X S+ 0 0 101 -4,-2.0 4,-3.0 2,-0.2 -1,-0.3 0.933 107.7 44.7 -64.9 -47.0 27.7 15.3 14.9 34 45 A D H X>S+ 0 0 68 -4,-1.9 5,-1.5 -3,-0.4 4,-1.0 0.920 111.8 53.8 -62.6 -44.3 25.8 12.2 13.7 35 46 A I H <5S+ 0 0 108 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.923 115.6 39.1 -56.0 -45.3 23.4 12.5 16.6 36 47 A I H <5S+ 0 0 144 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.898 117.7 45.7 -74.7 -41.4 22.6 16.1 15.7 37 48 A R H <5S- 0 0 62 -4,-3.0 -1,-0.2 -5,-0.2 -2,-0.2 0.521 103.2-135.2 -78.6 -3.2 22.5 15.8 12.0 38 49 A E T <5 + 0 0 181 -4,-1.0 2,-0.3 -5,-0.2 -3,-0.2 0.882 65.2 117.0 48.6 45.3 20.4 12.6 12.6 39 50 A E < 0 0 53 -5,-1.5 -1,-0.2 -6,-0.2 -2,-0.1 -0.928 360.0 360.0-137.3 159.0 22.5 10.8 10.0 40 51 A I 0 0 209 -2,-0.3 -9,-0.0 -3,-0.1 -5,-0.0 -0.957 360.0 360.0-114.0 360.0 24.8 7.8 10.0