==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-JUL-06 2DUY . COMPND 2 MOLECULE: COMPETENCE PROTEIN COMEA-RELATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR H.NIWA,A.SHIMADA,L.CHEN,Z.-J.LIU,B.-C.WANG,A.EBIHARA,S.YOKOY . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4050.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 53.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 21.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 24.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 11 A P 0 0 143 0, 0.0 21,-0.1 0, 0.0 20,-0.1 0.000 360.0 360.0 360.0 103.6 30.7 43.0 6.0 2 12 A L - 0 0 38 19,-0.3 5,-0.1 18,-0.0 16,-0.0 -0.679 360.0-136.0 -79.1 105.5 29.7 41.1 9.1 3 13 A P > - 0 0 54 0, 0.0 3,-1.6 0, 0.0 4,-0.1 -0.282 10.0-124.7 -64.6 147.2 26.0 41.7 9.5 4 14 A Q G > S+ 0 0 164 1,-0.3 3,-1.5 2,-0.2 -2,-0.0 0.795 106.7 68.1 -60.2 -31.7 24.5 42.6 12.9 5 15 A A G 3 S+ 0 0 103 1,-0.3 -1,-0.3 0, 0.0 -3,-0.0 0.496 98.8 52.0 -69.8 -2.3 22.1 39.7 12.6 6 16 A Q G < S+ 0 0 84 -3,-1.6 -1,-0.3 3,-0.0 -2,-0.2 0.338 91.1 138.3-115.5 6.3 25.0 37.3 12.9 7 17 A T < + 0 0 43 -3,-1.5 2,-0.1 -4,-0.1 56,-0.1 -0.831 48.9 39.9-112.9 148.1 26.6 38.7 16.1 8 18 A P S S- 0 0 64 0, 0.0 2,-0.4 0, 0.0 55,-0.3 0.530 89.8-143.5 -71.0 146.3 27.8 37.7 18.5 9 19 A V E -a 63 0A 5 53,-3.2 55,-1.9 -2,-0.1 2,-0.5 -0.661 11.1-125.5 -83.4 132.2 29.4 34.9 16.4 10 20 A S E > -a 64 0A 6 -2,-0.4 4,-2.2 53,-0.2 53,-0.1 -0.670 8.7-155.0 -81.1 121.7 29.7 31.5 18.0 11 21 A L T 4 S+ 0 0 0 53,-2.8 -1,-0.2 -2,-0.5 26,-0.1 0.839 96.7 43.6 -62.7 -31.7 33.3 30.1 18.0 12 22 A N T 4 S+ 0 0 48 52,-0.2 -1,-0.2 1,-0.1 25,-0.0 0.749 123.6 29.9 -85.7 -27.0 31.8 26.6 18.2 13 23 A E T 4 S+ 0 0 150 52,-0.1 -2,-0.2 2,-0.1 -1,-0.1 0.590 85.8 110.5-113.9 -11.5 29.0 26.8 15.7 14 24 A A < - 0 0 3 -4,-2.2 2,-0.1 1,-0.1 -5,-0.0 -0.279 63.3-122.6 -66.6 151.7 29.9 29.3 13.0 15 25 A S > - 0 0 54 1,-0.1 4,-2.1 19,-0.0 5,-0.2 -0.406 33.7 -99.6 -84.0 168.5 30.6 28.1 9.4 16 26 A L H > S+ 0 0 70 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.911 124.6 50.3 -56.2 -45.5 34.0 29.0 7.8 17 27 A E H 4 S+ 0 0 141 1,-0.2 4,-0.3 2,-0.2 -1,-0.2 0.860 108.4 52.2 -60.8 -40.5 32.4 31.9 5.9 18 28 A E H >4 S+ 0 0 76 1,-0.2 3,-1.0 2,-0.2 4,-0.3 0.894 110.5 47.6 -65.3 -39.4 30.9 33.3 9.1 19 29 A L H >< S+ 0 0 0 -4,-2.1 3,-1.7 1,-0.2 -2,-0.2 0.866 105.1 60.7 -68.8 -34.9 34.2 33.2 10.9 20 30 A X T 3< S+ 0 0 67 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.578 92.2 67.4 -69.7 -7.0 35.8 34.8 7.8 21 31 A A T < S+ 0 0 33 -3,-1.0 -19,-0.3 -4,-0.3 -1,-0.3 0.623 81.4 100.1 -85.6 -13.0 33.5 37.8 8.4 22 32 A L S X S- 0 0 5 -3,-1.7 3,-2.1 -4,-0.3 2,-0.1 -0.471 90.7 -94.3 -74.8 142.0 35.4 38.6 11.6 23 33 A P T 3 S+ 0 0 61 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.330 108.6 7.1 -59.0 123.5 38.0 41.4 11.6 24 34 A G T 3 S+ 0 0 65 1,-0.2 2,-0.7 -4,-0.1 5,-0.1 0.472 97.9 121.4 85.6 1.6 41.4 39.9 11.0 25 35 A I < + 0 0 9 -3,-2.1 -1,-0.2 -6,-0.2 -3,-0.1 -0.877 34.9 173.7-106.1 113.2 40.2 36.4 10.3 26 36 A G > - 0 0 28 -2,-0.7 4,-2.6 -3,-0.1 5,-0.2 -0.297 51.1 -80.5-101.3-171.6 41.1 34.9 6.9 27 37 A P H > S+ 0 0 80 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.835 127.0 50.4 -62.2 -33.6 40.7 31.4 5.5 28 38 A V H > S+ 0 0 79 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.931 115.0 41.0 -71.6 -45.9 43.7 30.0 7.2 29 39 A L H > S+ 0 0 30 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.893 113.0 55.0 -68.8 -38.7 42.8 31.3 10.7 30 40 A A H X S+ 0 0 0 -4,-2.6 4,-2.0 1,-0.2 -1,-0.2 0.912 108.7 49.5 -60.0 -42.1 39.1 30.4 10.2 31 41 A R H X S+ 0 0 103 -4,-1.7 4,-2.4 1,-0.2 -1,-0.2 0.915 110.5 48.8 -63.0 -45.8 40.1 26.8 9.4 32 42 A R H X S+ 0 0 76 -4,-1.9 4,-1.5 1,-0.2 -1,-0.2 0.850 107.8 55.7 -64.4 -34.4 42.3 26.5 12.5 33 43 A I H < S+ 0 0 1 -4,-2.3 3,-0.4 2,-0.2 4,-0.3 0.953 109.7 45.2 -63.9 -47.0 39.5 27.9 14.6 34 44 A V H >< S+ 0 0 52 -4,-2.0 3,-1.5 1,-0.2 -2,-0.2 0.928 112.3 52.0 -61.0 -44.4 37.1 25.2 13.4 35 45 A E H 3< S+ 0 0 129 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.761 104.8 57.4 -63.9 -25.4 39.8 22.5 13.9 36 46 A G T 3< S+ 0 0 19 -4,-1.5 -1,-0.3 -3,-0.4 -2,-0.2 0.470 91.5 164.1 -86.2 -0.3 40.4 23.7 17.4 37 47 A R < + 0 0 69 -3,-1.5 2,-0.1 -4,-0.3 -25,-0.1 -0.250 34.3 57.8 -62.9 151.5 36.8 23.2 18.6 38 48 A P - 0 0 102 0, 0.0 2,-0.4 0, 0.0 -26,-0.0 0.520 60.2-172.3 -87.4 160.9 35.3 23.0 21.1 39 49 A Y - 0 0 5 1,-0.1 3,-0.1 -2,-0.1 -27,-0.1 -0.944 13.7-166.8-111.9 131.0 36.0 26.2 23.0 40 50 A A S S+ 0 0 84 -2,-0.4 2,-0.3 1,-0.3 -1,-0.1 0.755 80.6 4.5 -86.8 -28.2 34.7 26.5 26.6 41 51 A R S > S- 0 0 155 23,-0.1 3,-1.9 1,-0.1 -1,-0.3 -0.966 79.7-106.0-149.3 160.9 35.3 30.2 26.6 42 52 A V G > S+ 0 0 23 -2,-0.3 3,-2.1 1,-0.3 4,-0.1 0.834 115.3 67.0 -60.3 -30.5 36.4 32.8 24.1 43 53 A E G > S+ 0 0 67 1,-0.3 3,-1.6 2,-0.2 -1,-0.3 0.694 82.4 75.2 -65.8 -15.3 39.8 33.0 25.8 44 54 A D G X S+ 0 0 38 -3,-1.9 3,-2.1 1,-0.3 -1,-0.3 0.633 72.2 85.3 -70.7 -9.8 40.5 29.4 24.6 45 55 A L G X + 0 0 0 -3,-2.1 3,-2.1 1,-0.3 -1,-0.3 0.719 69.2 79.6 -62.9 -17.7 41.0 31.0 21.2 46 56 A L G < S+ 0 0 83 -3,-1.6 -1,-0.3 1,-0.3 -2,-0.1 0.586 78.7 69.5 -66.9 -7.1 44.6 31.6 22.3 47 57 A K G < S+ 0 0 121 -3,-2.1 2,-0.4 2,-0.1 -1,-0.3 0.610 80.2 95.2 -83.8 -10.1 45.2 27.9 21.5 48 58 A V S X S- 0 0 10 -3,-2.1 3,-1.8 -4,-0.2 2,-0.1 -0.682 84.4-118.0 -85.9 127.1 44.9 28.7 17.8 49 59 A K T 3 S+ 0 0 159 -2,-0.4 -17,-0.1 1,-0.2 -2,-0.1 -0.420 98.6 24.0 -63.9 129.7 48.1 29.4 16.0 50 60 A G T 3 S+ 0 0 51 -2,-0.1 2,-0.9 -4,-0.1 -1,-0.2 0.333 89.4 109.2 100.3 -9.0 48.1 32.9 14.7 51 61 A I < - 0 0 8 -3,-1.8 -3,-0.1 -6,-0.2 -1,-0.1 -0.764 48.4-176.8-105.1 87.7 45.7 34.5 17.1 52 62 A G > - 0 0 29 -2,-0.9 4,-2.7 1,-0.1 3,-0.4 -0.234 43.1 -97.5 -75.8 170.2 47.7 36.8 19.3 53 63 A P H > S+ 0 0 92 0, 0.0 4,-2.8 0, 0.0 5,-0.1 0.823 125.4 54.3 -58.2 -33.3 46.3 38.8 22.2 54 64 A A H > S+ 0 0 67 2,-0.2 4,-1.3 1,-0.2 5,-0.1 0.862 110.2 47.4 -69.1 -34.8 46.0 41.9 20.0 55 65 A T H > S+ 0 0 42 -3,-0.4 4,-1.3 2,-0.2 3,-0.3 0.944 115.2 44.8 -68.3 -49.4 44.0 39.9 17.5 56 66 A L H X S+ 0 0 0 -4,-2.7 4,-1.9 1,-0.2 3,-0.2 0.883 105.6 61.8 -62.4 -40.3 41.8 38.5 20.2 57 67 A E H < S+ 0 0 106 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.886 106.4 45.9 -54.1 -41.6 41.4 41.9 21.9 58 68 A R H < S+ 0 0 158 -4,-1.3 -1,-0.2 -3,-0.3 -2,-0.2 0.826 114.5 48.3 -72.0 -32.3 39.8 43.2 18.8 59 69 A L H >X S+ 0 0 0 -4,-1.3 3,-1.7 -3,-0.2 4,-0.8 0.686 84.1 88.9 -83.0 -21.7 37.5 40.2 18.4 60 70 A R G >< S+ 0 0 102 -4,-1.9 3,-0.8 1,-0.3 -1,-0.2 0.824 83.2 56.7 -49.0 -39.8 36.2 39.9 21.9 61 71 A P G 34 S+ 0 0 100 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.817 111.8 43.5 -64.3 -25.9 33.2 42.2 21.3 62 72 A Y G <4 S+ 0 0 97 -3,-1.7 -53,-3.2 -4,-0.2 2,-0.3 0.490 101.9 84.8 -96.8 -4.0 32.0 40.0 18.5 63 73 A L E << +a 9 0A 16 -4,-0.8 -53,-0.2 -3,-0.8 -21,-0.1 -0.698 37.4 167.4-111.9 155.6 32.4 36.5 20.0 64 74 A R E a 10 0A 115 -55,-1.9 -53,-2.8 -2,-0.3 -52,-0.2 -0.928 360.0 360.0-145.8 162.6 30.7 34.0 22.2 65 75 A P 0 0 68 0, 0.0 -52,-0.1 0, 0.0 -25,-0.1 -0.280 360.0 360.0 -55.5 360.0 31.5 30.3 22.7