==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-JAN-00 1DV0 . COMPND 2 MOLECULE: DNA REPAIR PROTEIN HHR23A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR E.S.WITHERS-WARD,T.D.MUELLER,I.S.CHEN,J.FEIGON . 45 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3840.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 55.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 33.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A Q 0 0 231 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -17.6 29.5 12.0 6.7 2 2 A E >> + 0 0 51 2,-0.1 3,-1.4 1,-0.1 4,-0.7 0.182 360.0 102.4-126.2 9.9 31.3 9.2 4.8 3 3 A K H 3> + 0 0 143 1,-0.3 4,-0.5 2,-0.2 5,-0.2 0.657 66.9 75.5 -69.0 -17.8 28.8 8.7 2.0 4 4 A E H 34 S+ 0 0 106 1,-0.2 4,-0.4 2,-0.2 -1,-0.3 0.696 101.5 41.8 -66.0 -21.6 31.1 10.6 -0.3 5 5 A A H <> S+ 0 0 4 -3,-1.4 4,-2.6 2,-0.2 5,-0.4 0.707 95.7 75.8 -92.7 -29.3 33.1 7.5 -0.4 6 6 A I H < S+ 0 0 41 -4,-0.7 -2,-0.2 1,-0.3 -1,-0.1 0.658 109.3 34.1 -63.7 -12.2 30.2 5.0 -0.7 7 7 A E T X S+ 0 0 114 -4,-0.5 4,-1.4 2,-0.1 -1,-0.3 0.631 116.8 53.1-106.9 -28.4 30.0 6.2 -4.4 8 8 A R T 4 S+ 0 0 145 -4,-0.4 4,-0.3 2,-0.2 -2,-0.2 0.684 113.1 45.4 -80.1 -21.5 33.8 6.7 -4.9 9 9 A L T <>S+ 0 0 7 -4,-2.6 5,-0.7 2,-0.2 -1,-0.2 0.689 115.9 46.3 -89.2 -31.2 34.4 3.1 -3.6 10 10 A K T >45S+ 0 0 77 -5,-0.4 3,-1.3 1,-0.2 -2,-0.2 0.766 106.6 59.0 -78.6 -31.9 31.6 1.9 -5.8 11 11 A A T 3<5S+ 0 0 79 -4,-1.4 -2,-0.2 1,-0.3 -1,-0.2 0.705 86.1 75.4 -75.9 -21.3 32.9 3.9 -8.8 12 12 A L T 3 5S- 0 0 82 -4,-0.3 -1,-0.3 1,-0.1 -2,-0.2 0.709 129.8 -94.0 -56.1 -22.8 36.2 2.0 -8.5 13 13 A G T < 5S+ 0 0 68 -3,-1.3 -2,-0.2 1,-0.4 -3,-0.1 0.404 89.3 120.1 121.7 6.5 34.0 -0.7 -10.1 14 14 A F < - 0 0 52 -5,-0.7 -1,-0.4 1,-0.1 2,-0.2 -0.543 67.4 -96.6 -98.0 162.8 32.8 -2.6 -7.0 15 15 A P >> - 0 0 75 0, 0.0 3,-1.6 0, 0.0 4,-1.2 -0.586 29.2-121.5 -78.6 141.4 29.3 -3.2 -5.6 16 16 A E H 3> S+ 0 0 115 1,-0.3 4,-2.0 -2,-0.2 5,-0.2 0.641 108.2 70.6 -52.4 -20.1 28.0 -0.9 -2.8 17 17 A S H 3> S+ 0 0 93 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.861 104.1 36.7 -72.1 -38.6 27.6 -4.0 -0.6 18 18 A L H <> S+ 0 0 60 -3,-1.6 4,-0.8 2,-0.2 -1,-0.2 0.752 112.3 63.8 -76.8 -26.1 31.4 -4.4 -0.2 19 19 A V H >X S+ 0 0 0 -4,-1.2 4,-1.5 2,-0.2 3,-0.6 0.932 100.9 47.8 -65.8 -51.6 31.8 -0.7 -0.1 20 20 A I H 3X S+ 0 0 67 -4,-2.0 4,-2.4 1,-0.2 3,-0.4 0.914 118.5 39.5 -51.0 -53.1 29.9 -0.1 3.1 21 21 A Q H 3< S+ 0 0 119 -4,-0.9 -1,-0.2 1,-0.2 -2,-0.2 0.469 114.2 55.1 -86.8 -3.1 31.7 -2.9 5.0 22 22 A A H << S+ 0 0 2 -4,-0.8 4,-0.3 -3,-0.6 -1,-0.2 0.582 115.1 38.8 -97.2 -18.2 35.0 -2.0 3.4 23 23 A Y H <>S+ 0 0 14 -4,-1.5 6,-0.8 -3,-0.4 5,-0.5 0.905 120.7 41.7 -89.0 -59.1 34.8 1.6 4.6 24 24 A F T ><5S+ 0 0 104 -4,-2.4 3,-0.8 3,-0.3 -3,-0.2 0.769 116.2 51.1 -57.9 -34.2 33.2 1.0 8.0 25 25 A A T 3 5S+ 0 0 53 -5,-0.3 -1,-0.2 1,-0.2 -3,-0.1 0.852 111.7 46.8 -73.5 -34.0 35.5 -2.0 8.6 26 26 A C T 3 5S- 0 0 15 -4,-0.3 -1,-0.2 -3,-0.2 -2,-0.2 0.187 131.1 -95.4 -88.6 15.1 38.6 0.0 7.7 27 27 A E T < 5 - 0 0 138 -3,-0.8 -3,-0.3 1,-0.2 -2,-0.1 0.996 68.3 -66.2 61.6 69.0 37.3 2.9 10.0 28 28 A K S - 0 0 65 -6,-0.8 4,-1.0 -7,-0.2 -1,-0.1 -0.784 42.5-152.4-107.4 140.5 39.0 5.6 5.8 30 30 A E H > S+ 0 0 92 -2,-0.4 4,-2.0 2,-0.2 -1,-0.1 0.976 96.5 33.9 -70.8 -58.1 39.7 6.6 2.2 31 31 A N H 4 S+ 0 0 127 1,-0.2 -1,-0.1 2,-0.2 5,-0.1 0.907 121.3 47.9 -65.2 -46.6 43.2 5.2 1.8 32 32 A L H >> S+ 0 0 89 1,-0.2 4,-1.4 2,-0.2 3,-0.8 0.806 110.9 52.7 -67.1 -31.3 42.7 2.2 4.0 33 33 A A H 3X S+ 0 0 0 -4,-1.0 4,-2.0 1,-0.2 5,-0.2 0.871 102.6 56.6 -72.0 -37.4 39.4 1.4 2.2 34 34 A A H 3< S+ 0 0 38 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.320 111.4 47.2 -74.5 9.4 41.2 1.5 -1.2 35 35 A N H <> S+ 0 0 84 -3,-0.8 4,-1.2 -13,-0.2 -2,-0.2 0.562 111.1 47.3-113.9 -31.0 43.3 -1.2 0.4 36 36 A F H < S+ 0 0 72 -4,-1.4 -2,-0.2 -14,-0.2 -3,-0.2 0.717 122.0 39.4 -78.7 -21.1 40.4 -3.2 1.8 37 37 A L T < S+ 0 0 6 -4,-2.0 -3,-0.2 -5,-0.1 -1,-0.1 0.816 129.9 26.7 -92.3 -36.6 38.8 -2.9 -1.6 38 38 A L T 4 S+ 0 0 78 -5,-0.2 -2,-0.2 2,-0.1 -3,-0.1 0.460 131.8 35.2-111.4 -7.7 41.8 -3.3 -3.8 39 39 A S S < S+ 0 0 82 -4,-1.2 3,-0.3 2,-0.1 -3,-0.2 0.447 107.8 63.1-124.4 -10.4 44.1 -5.4 -1.6 40 40 A Q + 0 0 91 1,-0.2 -4,-0.1 -5,-0.2 -2,-0.1 -0.055 61.5 129.4-106.0 29.1 41.5 -7.6 0.2 41 41 A N + 0 0 125 1,-0.1 2,-1.0 -3,-0.0 -1,-0.2 0.873 45.8 91.1 -47.1 -50.1 40.4 -9.3 -3.1 42 42 A F + 0 0 200 -3,-0.3 2,-0.2 2,-0.0 -1,-0.1 -0.354 68.0 96.0 -53.0 91.1 40.8 -12.7 -1.4 43 43 A D - 0 0 121 -2,-1.0 2,-0.3 0, 0.0 -3,-0.0 -0.772 55.2-152.0 175.8 134.3 37.3 -13.1 -0.2 44 44 A D 0 0 147 -2,-0.2 -2,-0.0 0, 0.0 -3,-0.0 -0.899 360.0 360.0-117.7 149.6 34.1 -14.7 -1.4 45 45 A E 0 0 253 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 0.317 360.0 360.0 53.4 360.0 30.5 -13.7 -0.6