==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 22-JAN-00 1DVV . COMPND 2 MOLECULE: CYTOCHROME C551; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; . AUTHOR J.HASEGAWA,S.UCHIYAMA,Y.TANIMOTO,M.MIZUTANI,Y.KOBAYASHI, . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5305.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 63.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 39.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 189 0, 0.0 5,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-176.2 70.2 16.1 0.3 2 2 A D > - 0 0 116 1,-0.1 4,-1.2 3,-0.1 71,-0.0 -0.041 360.0-109.5 -48.7 160.0 67.5 14.6 2.5 3 3 A P H >> S+ 0 0 30 0, 0.0 4,-1.7 0, 0.0 3,-0.8 0.948 118.8 53.6 -61.0 -49.9 67.0 10.8 2.3 4 4 A E H 3> S+ 0 0 111 1,-0.3 4,-1.5 2,-0.2 3,-0.4 0.945 101.1 60.6 -52.0 -46.9 63.6 11.1 0.6 5 5 A V H >> S+ 0 0 31 1,-0.3 4,-2.2 2,-0.2 3,-0.5 0.908 103.9 51.3 -48.1 -40.4 65.3 13.3 -2.1 6 6 A L H S+ 0 0 0 -4,-1.7 6,-2.0 -3,-0.4 5,-1.2 0.820 111.7 40.4 -58.2 -27.9 64.4 8.0 -3.1 8 8 A K H <<5S+ 0 0 155 -4,-1.5 -1,-0.2 -3,-0.5 -2,-0.2 0.841 112.3 52.6 -90.1 -36.6 63.3 10.3 -6.0 9 9 A N H <5S+ 0 0 84 -4,-2.2 -2,-0.2 -5,-0.3 -3,-0.2 0.800 119.9 35.6 -70.6 -25.9 66.7 10.8 -7.7 10 10 A K H <5S- 0 0 83 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.736 113.8-112.1 -97.9 -26.4 67.3 7.0 -7.8 11 11 A G T >X5S+ 0 0 33 -4,-0.7 3,-1.5 -5,-0.4 4,-0.8 0.634 71.1 138.0 103.4 18.5 63.7 5.9 -8.5 12 12 A C H 3> - 0 0 1 -7,-0.3 4,-1.9 -10,-0.1 -8,-0.2 0.011 36.5-119.9 -42.3 156.2 55.5 -0.7 1.4 27 27 A Y H > S+ 0 0 2 -10,-1.8 4,-1.6 2,-0.2 3,-0.3 0.994 112.6 41.3 -69.1 -60.6 58.4 1.3 3.1 28 28 A K H > S+ 0 0 117 -10,-1.5 4,-1.4 1,-0.3 3,-0.4 0.931 114.6 55.1 -53.1 -42.3 56.8 1.6 6.6 29 29 A D H > S+ 0 0 82 -11,-0.4 4,-1.7 1,-0.2 3,-0.5 0.919 100.3 58.9 -58.5 -40.9 55.6 -2.0 6.2 30 30 A V H X S+ 0 0 6 -4,-1.9 4,-2.0 -3,-0.3 -1,-0.2 0.907 106.9 47.7 -56.3 -38.1 59.3 -3.1 5.5 31 31 A A H X S+ 0 0 16 -4,-1.6 4,-0.9 -3,-0.4 -1,-0.3 0.782 105.5 60.0 -74.0 -24.2 60.1 -1.7 9.0 32 32 A A H < S+ 0 0 72 -4,-1.4 -1,-0.2 -3,-0.5 -2,-0.2 0.835 111.7 38.5 -73.3 -29.8 57.2 -3.5 10.5 33 33 A K H < S+ 0 0 149 -4,-1.7 -2,-0.2 -3,-0.2 -1,-0.2 0.844 125.8 36.3 -88.8 -35.4 58.6 -6.9 9.4 34 34 A Y H >< S+ 0 0 68 -4,-2.0 3,-2.0 -5,-0.3 -2,-0.2 0.487 87.1 128.9 -94.1 -1.7 62.2 -6.1 10.1 35 35 A A T 3< + 0 0 69 -4,-0.9 3,-0.1 1,-0.2 -3,-0.1 -0.276 64.1 41.0 -54.0 130.2 61.4 -4.1 13.2 36 36 A G T 3 S+ 0 0 84 1,-0.4 -1,-0.2 -5,-0.0 -2,-0.1 0.141 80.4 130.4 115.2 -19.0 63.5 -5.3 16.1 37 37 A Q < - 0 0 126 -3,-2.0 2,-1.4 1,-0.1 3,-0.5 -0.364 66.2-123.0 -66.6 145.8 66.7 -5.8 14.1 38 38 A A S S- 0 0 112 1,-0.3 -1,-0.1 -3,-0.1 -3,-0.1 -0.244 97.6 -11.9 -85.1 52.3 69.8 -4.2 15.8 39 39 A G S >> S+ 0 0 38 -2,-1.4 4,-1.1 3,-0.0 3,-0.5 0.671 70.4 165.1 122.1 56.5 70.5 -2.0 12.7 40 40 A A H 3> S+ 0 0 8 -3,-0.5 4,-1.8 1,-0.2 5,-0.1 0.673 74.5 68.1 -75.3 -13.2 68.4 -3.2 9.7 41 41 A E H 3> S+ 0 0 78 2,-0.2 4,-1.5 3,-0.2 -1,-0.2 0.843 97.4 51.8 -75.2 -30.0 69.3 0.0 7.9 42 42 A A H <> S+ 0 0 44 -3,-0.5 4,-1.5 2,-0.2 -2,-0.2 0.976 115.5 38.3 -70.6 -53.0 72.9 -1.0 7.5 43 43 A Y H X S+ 0 0 126 -4,-1.1 4,-2.1 1,-0.2 5,-0.3 0.901 112.2 59.8 -65.6 -34.6 72.2 -4.4 6.0 44 44 A L H X S+ 0 0 17 -4,-1.8 4,-1.3 1,-0.2 -1,-0.2 0.910 102.7 53.5 -59.2 -36.6 69.4 -2.8 4.0 45 45 A A H X S+ 0 0 0 -4,-1.5 4,-1.6 1,-0.2 -1,-0.2 0.901 107.2 50.2 -65.9 -37.7 72.0 -0.5 2.5 46 46 A Q H < S+ 0 0 102 -4,-1.5 4,-0.4 1,-0.2 -1,-0.2 0.849 115.0 43.5 -70.6 -29.5 74.1 -3.6 1.5 47 47 A R H X S+ 0 0 90 -4,-2.1 4,-0.9 1,-0.2 -1,-0.2 0.632 112.2 54.7 -88.4 -12.4 71.0 -5.1 -0.1 48 48 A I H < S+ 0 0 15 -4,-1.3 16,-1.1 -5,-0.3 18,-0.3 0.752 105.8 50.3 -90.3 -25.2 70.0 -1.8 -1.7 49 49 A K T < S+ 0 0 85 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.1 0.661 130.1 21.0 -85.5 -14.3 73.3 -1.3 -3.4 50 50 A N T 4 S- 0 0 103 -4,-0.4 -2,-0.2 -5,-0.2 -3,-0.1 0.482 93.3-157.3-127.0 -11.7 73.1 -4.8 -4.9 51 51 A G < + 0 0 2 -4,-0.9 2,-0.2 11,-0.2 -3,-0.1 0.168 18.9 172.3 51.5 174.6 69.4 -5.6 -4.8 52 52 A S - 0 0 27 9,-0.1 9,-2.1 7,-0.1 3,-0.2 -0.899 28.2-105.6 163.9 168.0 68.4 -9.3 -4.8 53 53 A Q S S+ 0 0 106 7,-0.3 8,-0.0 -2,-0.2 6,-0.0 -0.167 87.2 66.3-101.9-161.1 65.5 -11.8 -4.4 54 54 A G S S+ 0 0 78 3,-0.7 -1,-0.2 1,-0.1 0, 0.0 0.780 87.9 94.7 56.4 19.4 64.7 -14.2 -1.5 55 55 A V S S- 0 0 53 2,-0.7 -2,-0.1 -3,-0.2 -1,-0.1 0.819 109.1 -22.0-104.5 -62.9 64.0 -10.9 0.3 56 56 A W S S- 0 0 94 1,-0.5 -3,-0.1 3,-0.1 -32,-0.0 0.649 125.0 -21.8-120.0 -35.5 60.3 -10.1 0.1 57 57 A G S S- 0 0 27 2,-0.1 -2,-0.7 0, 0.0 -3,-0.7 -0.916 82.7 -69.9-160.1-175.9 59.2 -12.2 -3.0 58 58 A P S S+ 0 0 126 0, 0.0 -5,-0.1 0, 0.0 0, 0.0 0.375 105.3 92.4 -68.9 6.8 60.5 -13.8 -6.2 59 59 A I S S- 0 0 120 -36,-0.1 -7,-0.1 -7,-0.1 -2,-0.1 -0.718 71.7-152.3-106.1 85.4 61.1 -10.3 -7.6 60 60 A P - 0 0 60 0, 0.0 -7,-0.3 0, 0.0 -9,-0.0 -0.244 24.0-111.4 -54.1 133.9 64.7 -9.5 -6.7 61 61 A M - 0 0 57 -9,-2.1 -9,-0.1 1,-0.1 3,-0.1 -0.531 34.5-111.5 -70.5 131.9 65.3 -5.7 -6.4 62 62 A P - 0 0 91 0, 0.0 -11,-0.2 0, 0.0 -1,-0.1 -0.437 37.3-107.8 -64.4 130.2 67.5 -4.4 -9.2 63 63 A P - 0 0 87 0, 0.0 2,-0.3 0, 0.0 -13,-0.2 -0.298 37.3-149.8 -59.4 138.2 70.8 -3.3 -7.8 64 64 A N - 0 0 51 -16,-1.1 2,-0.1 2,-0.1 -13,-0.1 -0.745 21.2-121.5-110.4 160.6 71.2 0.5 -7.8 65 65 A A + 0 0 107 -2,-0.3 2,-0.6 -55,-0.1 -16,-0.1 -0.038 61.5 142.1 -89.3 35.7 74.3 2.6 -8.1 66 66 A V - 0 0 2 -18,-0.3 5,-0.2 1,-0.1 -2,-0.1 -0.653 54.9-120.5 -79.9 119.3 73.7 4.3 -4.7 67 67 A S > - 0 0 74 -2,-0.6 4,-2.2 1,-0.1 5,-0.2 0.090 31.4-100.3 -46.4 172.8 77.0 4.8 -2.9 68 68 A D H > S+ 0 0 61 2,-0.2 4,-1.4 1,-0.2 5,-0.1 0.917 125.3 47.3 -68.9 -39.2 77.3 3.0 0.4 69 69 A D H > S+ 0 0 114 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.882 112.9 49.5 -69.5 -34.8 76.5 6.3 2.4 70 70 A E H > S+ 0 0 55 1,-0.2 4,-1.5 2,-0.2 -2,-0.2 0.906 111.0 48.2 -71.7 -38.5 73.5 7.0 0.1 71 71 A A H X S+ 0 0 0 -4,-2.2 4,-1.5 2,-0.2 -1,-0.2 0.792 107.4 58.2 -72.5 -22.8 72.1 3.5 0.5 72 72 A Q H X S+ 0 0 71 -4,-1.4 4,-2.0 2,-0.2 5,-0.2 0.931 109.0 42.8 -71.7 -41.7 72.6 3.8 4.2 73 73 A T H X S+ 0 0 40 -4,-1.7 4,-1.2 1,-0.2 -2,-0.2 0.810 110.8 58.2 -72.5 -25.8 70.3 6.9 4.3 74 74 A L H X S+ 0 0 4 -4,-1.5 4,-1.6 2,-0.2 -1,-0.2 0.850 106.6 48.6 -72.0 -31.0 68.0 5.0 1.9 75 75 A A H X S+ 0 0 0 -4,-1.5 4,-1.9 -34,-0.2 3,-0.3 0.972 114.3 41.9 -73.3 -53.6 67.7 2.2 4.5 76 76 A K H X S+ 0 0 101 -4,-2.0 4,-0.5 1,-0.2 -1,-0.2 0.786 111.1 61.8 -64.9 -20.8 66.9 4.5 7.5 77 77 A W H X S+ 0 0 7 -4,-1.2 4,-0.9 -5,-0.2 3,-0.5 0.935 102.9 47.4 -70.7 -43.6 64.7 6.4 5.0 78 78 A I H >< S+ 0 0 16 -4,-1.6 3,-1.0 -3,-0.3 -47,-0.2 0.957 113.4 46.9 -62.8 -48.8 62.4 3.4 4.4 79 79 A L H 3< S+ 0 0 61 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.640 116.7 47.4 -69.2 -9.7 62.1 2.6 8.2 80 80 A S H 3< S+ 0 0 88 -4,-0.5 -1,-0.2 -3,-0.5 -2,-0.2 0.493 84.5 117.3-108.2 -5.1 61.4 6.4 8.7 81 81 A Q << 0 0 30 -3,-1.0 -3,-0.1 -4,-0.9 -62,-0.0 0.118 360.0 360.0 -50.5 179.0 58.8 6.8 6.0 82 82 A K 0 0 196 0, 0.0 -1,-0.1 0, 0.0 -63,-0.0 0.936 360.0 360.0 -84.5 360.0 55.3 7.9 7.0