==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SURFACE ACTIVE PROTEIN 11-AUG-06 2DWF . COMPND 2 MOLECULE: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR V.BOOTH,M.SARKER,A.J.WARING,K.M.W.KEOUGH . 34 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3317.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 55.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 44.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A a 0 0 68 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 54.0 -14.0 0.8 -2.4 2 2 A W + 0 0 185 2,-0.1 4,-0.2 30,-0.0 3,-0.1 0.177 360.0 101.2-158.0 21.6 -12.2 -1.1 0.4 3 3 A L > + 0 0 123 1,-0.1 4,-1.6 2,-0.1 3,-0.4 0.406 57.4 99.1 -90.4 0.8 -9.7 -3.5 -1.2 4 4 A b H >> S+ 0 0 6 1,-0.2 4,-2.7 2,-0.2 3,-1.0 0.968 73.9 52.8 -49.3 -77.8 -6.8 -1.0 -0.5 5 5 A R H 3> S+ 0 0 165 1,-0.3 4,-1.0 2,-0.2 -1,-0.2 0.749 108.5 58.3 -29.8 -37.2 -5.3 -2.6 2.7 6 6 A A H 3> S+ 0 0 60 -3,-0.4 4,-1.2 -4,-0.2 3,-0.3 0.970 114.5 30.1 -63.6 -58.1 -5.1 -5.8 0.5 7 7 A L H < S+ 0 0 74 -4,-0.9 3,-0.6 1,-0.2 -2,-0.2 0.926 108.8 33.1 -46.3 -57.7 4.4 -4.2 1.9 13 13 A A H 3< S+ 0 0 65 -4,-1.6 -1,-0.2 1,-0.2 -2,-0.2 0.853 104.0 74.3 -72.0 -34.7 6.2 -7.3 1.3 14 14 A M H 3< S+ 0 0 118 -4,-1.1 -1,-0.2 1,-0.3 -2,-0.2 0.813 112.7 29.0 -47.0 -30.2 7.2 -6.2 -2.2 15 15 A I X< + 0 0 52 -4,-1.4 3,-0.5 -3,-0.6 -1,-0.3 -0.839 66.7 164.9-137.1 97.0 9.6 -4.0 -0.3 16 16 A P T 3 S+ 0 0 121 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.930 84.4 30.7 -76.6 -48.7 10.9 -5.3 3.1 17 17 A K T 3 S+ 0 0 210 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.381 94.9 127.5-108.1 53.2 13.8 -2.9 3.5 18 18 A G < - 0 0 45 -3,-0.5 2,-0.3 -2,-0.2 -3,-0.1 -0.748 34.4-172.4-109.6 157.8 12.4 0.1 1.7 19 19 A G + 0 0 63 -2,-0.3 -2,-0.0 2,-0.1 2,-0.0 -0.901 48.0 62.2-154.7 121.9 12.0 3.7 2.8 20 20 A R S S- 0 0 259 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.388 91.1 -42.3 170.0 -80.0 10.3 6.7 1.1 21 21 A M - 0 0 158 -2,-0.0 -2,-0.1 4,-0.0 3,-0.0 -0.977 42.2-147.8-169.6 165.0 6.6 6.6 0.6 22 22 A L - 0 0 31 -2,-0.3 3,-0.3 1,-0.0 4,-0.3 -0.783 26.8-117.5-134.9 178.0 3.7 4.3 -0.6 23 23 A P S >> S+ 0 0 56 0, 0.0 4,-4.1 0, 0.0 3,-0.9 0.680 92.5 90.3 -91.1 -23.0 0.4 4.5 -2.4 24 24 A Q H 3> S+ 0 0 34 1,-0.3 4,-1.7 2,-0.2 -19,-0.1 0.716 86.7 58.5 -47.8 -19.8 -1.7 3.3 0.6 25 25 A L H 3> S+ 0 0 77 -3,-0.3 4,-0.9 2,-0.2 -1,-0.3 0.927 115.2 29.7 -78.3 -45.0 -1.9 6.9 1.4 26 26 A V H <> S+ 0 0 89 -3,-0.9 4,-2.2 -4,-0.3 5,-0.2 0.786 120.9 57.5 -81.4 -27.6 -3.5 8.1 -1.8 27 27 A b H X S+ 0 0 18 -4,-4.1 4,-3.6 2,-0.2 5,-0.4 0.910 106.4 46.6 -65.8 -46.1 -5.1 4.7 -2.1 28 28 A R H X S+ 0 0 147 -4,-1.7 4,-0.8 -5,-0.4 -1,-0.2 0.788 113.9 50.1 -68.8 -26.6 -6.8 5.1 1.3 29 29 A L H < S+ 0 0 137 -4,-0.9 -2,-0.2 2,-0.2 -1,-0.2 0.825 120.9 33.3 -79.6 -33.5 -7.9 8.6 0.2 30 30 A V H < S+ 0 0 98 -4,-2.2 3,-0.5 2,-0.1 -2,-0.2 0.792 123.1 44.1 -90.9 -34.8 -9.3 7.4 -3.1 31 31 A L H < S+ 0 0 52 -4,-3.6 -3,-0.2 -5,-0.2 -2,-0.2 0.732 94.5 76.4 -84.5 -21.6 -10.6 4.0 -2.1 32 32 A R S < S+ 0 0 170 -4,-0.8 -1,-0.2 -5,-0.4 -2,-0.1 0.758 73.7 133.2 -57.6 -20.8 -12.1 5.3 1.1 33 33 A a 0 0 63 -3,-0.5 -3,-0.1 -4,-0.1 -2,-0.0 0.203 360.0 360.0 -29.1 145.1 -14.7 6.6 -1.3 34 34 A S 0 0 163 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.934 360.0 360.0-168.0 360.0 -18.3 5.9 -0.3