==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGHT-HARVESTING PROTEIN 21-DEC-99 1DX7 . COMPND 2 MOLECULE: LIGHT-HARVESTING PROTEIN B-875-BETA CHAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; . AUTHOR M.J.CONROY,W.WESTERHUIS,P.S.PARKES-LOACH,P.A.LOACH, . 48 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4815.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 83.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 20.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 54.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 150 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 120.7 -2.8 -11.6 31.2 2 2 A D - 0 0 117 1,-0.2 4,-0.2 2,-0.0 0, 0.0 -0.959 360.0-102.6-163.1 178.7 -4.0 -9.4 28.3 3 3 A K > + 0 0 168 -2,-0.3 3,-1.7 2,-0.1 -1,-0.2 0.853 52.6 138.1 -82.3 -97.7 -7.0 -8.5 26.2 4 4 A S G > >S- 0 0 20 1,-0.3 5,-2.9 4,-0.2 3,-2.5 0.867 83.0-110.2 56.2 23.3 -7.0 -10.1 22.7 5 5 A D G > 5 - 0 0 125 3,-0.3 3,-1.2 1,-0.3 -1,-0.3 0.698 45.9 -96.0 15.1 43.4 -10.6 -10.6 23.8 6 6 A L G < 5S+ 0 0 157 -3,-1.7 -1,-0.3 1,-0.3 -2,-0.1 0.776 128.1 29.8 17.3 52.0 -9.4 -14.2 23.9 7 7 A G G X>5S+ 0 0 44 -3,-2.5 4,-1.0 -4,-0.1 3,-1.0 -0.215 106.8 67.7 166.9 -46.6 -10.9 -14.3 20.5 8 8 A Y H <>5S+ 0 0 103 -3,-1.2 4,-2.6 1,-0.3 -3,-0.3 0.842 85.9 80.7 -61.3 -25.8 -10.3 -10.7 19.5 9 9 A T H 3> S+ 0 0 47 -3,-1.0 4,-1.0 -6,-0.3 3,-0.7 0.992 118.7 48.0 -70.6 -75.5 -7.2 -13.5 16.1 11 11 A L H >X S+ 0 0 92 -4,-1.0 4,-2.9 1,-0.2 3,-0.8 0.812 104.4 70.6 -37.9 -29.3 -9.7 -11.2 14.4 12 12 A T H 3X>S+ 0 0 24 -4,-2.6 4,-3.1 -5,-0.3 5,-0.8 0.984 87.0 58.4 -50.7 -70.1 -7.4 -8.5 15.7 13 13 A D H <<5S+ 0 0 127 -4,-1.2 -1,-0.3 -3,-0.7 -2,-0.2 0.788 112.7 43.6 -31.4 -32.6 -4.6 -9.4 13.3 14 14 A E H 5S+ 0 0 49 1,-0.3 4,-1.9 2,-0.2 -3,-0.1 0.915 119.3 48.5 -35.6 -70.6 -2.0 -4.0 6.1 22 22 A V H >>XS+ 0 0 77 -5,-1.0 4,-2.2 1,-0.2 3,-0.6 0.888 110.6 55.1 -37.3 -50.2 -4.0 -1.4 4.3 23 23 A Y H 3>5S+ 0 0 153 -6,-0.5 4,-2.1 -3,-0.3 -2,-0.2 0.977 111.4 39.5 -50.6 -68.3 -1.3 1.1 5.5 24 24 A M H 3X5S+ 0 0 148 -4,-2.0 4,-1.1 2,-0.2 -1,-0.3 0.652 115.8 60.6 -61.0 -9.4 1.7 -0.7 4.1 25 25 A S H X5S+ 0 0 31 -4,-2.2 4,-2.3 1,-0.2 3,-0.8 0.838 114.4 69.7 -56.1 -27.4 -1.4 2.0 -0.3 27 27 A L H 3X S+ 0 0 32 -3,-1.2 4,-1.7 -4,-0.1 -2,-0.2 0.772 119.1 48.7-109.0 -54.5 5.6 2.9 -6.9 33 33 A V H >X S+ 0 0 75 -4,-2.5 4,-2.6 2,-0.2 3,-0.6 0.936 111.1 54.5 -52.0 -46.0 3.0 4.3 -9.2 34 34 A A H 3> S+ 0 0 37 -5,-0.5 4,-2.2 1,-0.3 5,-0.3 0.982 101.8 55.8 -51.1 -58.9 4.5 7.7 -8.5 35 35 A I H 3> S+ 0 0 81 1,-0.3 4,-2.2 -4,-0.3 -1,-0.3 0.848 108.3 51.1 -41.7 -34.1 7.9 6.5 -9.5 36 36 A V H S+ 0 0 70 -4,-1.7 5,-1.2 -3,-0.6 4,-0.5 0.969 100.3 58.6 -71.4 -49.9 6.1 5.6 -12.7 37 37 A A H <5S+ 0 0 51 -4,-2.6 4,-0.3 1,-0.3 -2,-0.2 0.865 111.0 46.3 -46.8 -32.0 4.7 9.1 -13.0 38 38 A H H X5S+ 0 0 125 -4,-2.2 4,-1.0 -5,-0.2 -1,-0.3 0.915 130.4 20.9 -79.1 -41.3 8.4 10.1 -13.0 39 39 A L H X5S+ 0 0 92 -4,-2.2 4,-1.5 -5,-0.3 3,-0.4 0.931 119.9 56.0 -88.5 -68.2 9.4 7.4 -15.5 40 40 A A H X5S+ 0 0 29 -4,-0.5 4,-1.0 1,-0.3 -3,-0.2 0.804 112.9 49.3 -33.8 -34.4 6.2 6.5 -17.3 41 41 A V H 4