==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 07-SEP-06 2DY7 . COMPND 2 MOLECULE: CHROMO DOMAIN PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.OKUDA,Y.NISHIMURA . 81 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6062.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 55.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 13.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 22.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 172 A Q 0 0 205 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 101.0 13.0 7.4 -19.9 2 173 A P - 0 0 116 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.144 360.0-106.8 -72.7-165.5 9.6 6.8 -18.3 3 174 A E + 0 0 131 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.908 60.4 127.7-134.3 109.3 8.9 6.3 -14.6 4 175 A D + 0 0 123 -2,-0.4 -1,-0.1 61,-0.1 3,-0.1 0.142 26.0 161.7-145.6 21.3 8.1 2.8 -13.2 5 176 A F - 0 0 116 1,-0.1 -2,-0.0 2,-0.0 0, 0.0 -0.007 50.1 -93.6 -42.5 151.9 10.6 2.4 -10.3 6 177 A H + 0 0 126 1,-0.1 60,-0.1 60,-0.1 3,-0.1 -0.109 53.2 156.9 -63.9 170.7 9.5 -0.4 -7.9 7 178 A G + 0 0 15 1,-0.4 2,-0.5 59,-0.1 40,-0.5 0.232 55.0 53.0-160.6 -57.0 7.5 0.6 -4.8 8 179 A I - 0 0 5 57,-1.0 -1,-0.4 1,-0.2 38,-0.2 -0.822 50.0-179.3 -98.3 128.2 5.4 -2.2 -3.3 9 180 A D - 0 0 63 36,-1.1 2,-0.3 -2,-0.5 37,-0.2 0.903 67.2 -17.0 -90.6 -48.9 7.2 -5.5 -2.5 10 181 A I E -A 45 0A 67 35,-1.6 35,-4.0 3,-0.0 2,-1.3 -0.965 53.2-125.5-159.1 141.4 4.3 -7.6 -1.1 11 182 A V E -A 44 0A 12 -2,-0.3 33,-0.2 33,-0.2 32,-0.1 -0.681 25.4-173.4 -88.3 91.7 0.8 -7.1 0.3 12 183 A I E - 0 0 65 -2,-1.3 2,-0.3 31,-1.1 -1,-0.2 0.875 60.7 -52.8 -55.0 -37.2 1.1 -8.9 3.6 13 184 A N E -A 43 0A 77 30,-0.9 30,-3.1 -3,-0.1 2,-0.3 -0.970 53.7-140.5-178.4-168.9 -2.7 -8.4 4.2 14 185 A H E +A 42 0A 30 28,-0.3 2,-0.3 -2,-0.3 28,-0.3 -0.975 15.5 167.0-163.5 176.6 -5.5 -5.9 4.3 15 186 A R E -A 41 0A 122 26,-1.5 26,-3.9 -2,-0.3 -2,-0.0 -0.980 53.4 -35.8 179.9 179.4 -8.7 -4.8 6.2 16 187 A L - 0 0 48 -2,-0.3 2,-2.7 24,-0.3 3,-0.3 -0.235 61.3-115.7 -54.2 140.2 -11.2 -2.0 6.5 17 188 A K + 0 0 58 22,-0.3 -1,-0.2 1,-0.2 23,-0.1 -0.329 57.1 152.4 -77.0 63.7 -9.5 1.4 6.1 18 189 A T >> - 0 0 36 -2,-2.7 3,-4.0 3,-0.1 4,-1.1 0.835 29.8-165.1 -64.3 -29.0 -10.4 2.4 9.7 19 190 A S T 34 - 0 0 81 -3,-0.3 -1,-0.1 1,-0.3 -2,-0.1 0.868 69.9 -67.7 46.7 35.5 -7.3 4.7 9.8 20 191 A L T 34 S+ 0 0 176 1,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.682 128.3 98.2 61.1 12.4 -7.8 4.7 13.6 21 192 A E T <4 + 0 0 155 -3,-4.0 -2,-0.2 -4,-0.1 -3,-0.1 0.885 51.5 166.4 -95.9 -52.7 -10.9 6.7 12.8 22 193 A E < + 0 0 149 -4,-1.1 3,-0.1 -5,-0.1 -5,-0.0 0.194 12.9 146.0 55.9 170.0 -13.7 4.1 13.0 23 194 A G + 0 0 75 1,-0.2 2,-0.3 0, 0.0 -1,-0.1 -0.096 63.2 28.0 157.5 -46.0 -17.4 5.2 13.1 24 195 A K - 0 0 154 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.954 67.5-130.3-139.0 159.1 -19.5 2.7 11.2 25 196 A V - 0 0 138 -2,-0.3 2,-0.4 -3,-0.1 0, 0.0 -0.725 11.0-156.2-108.2 160.7 -19.3 -1.0 10.4 26 197 A L - 0 0 68 -2,-0.3 3,-0.5 1,-0.1 -10,-0.1 -0.895 13.8-179.3-140.0 109.9 -19.7 -2.8 7.0 27 198 A E + 0 0 170 -2,-0.4 -1,-0.1 1,-0.2 -2,-0.0 0.106 61.5 100.8 -93.8 25.0 -20.8 -6.4 6.6 28 199 A K - 0 0 131 1,-0.2 -1,-0.2 7,-0.0 7,-0.1 0.363 68.5-160.2 -89.7 8.4 -20.6 -6.3 2.8 29 200 A T - 0 0 101 -3,-0.5 -1,-0.2 1,-0.1 50,-0.1 -0.002 34.8 -72.3 42.8-154.1 -17.2 -8.0 2.9 30 201 A V + 0 0 18 1,-0.1 -1,-0.1 48,-0.1 3,-0.0 -0.851 54.5 159.5-142.2 105.3 -15.2 -7.5 -0.4 31 202 A P S S+ 0 0 68 0, 0.0 50,-0.2 0, 0.0 2,-0.1 0.900 72.3 16.9 -88.5 -52.2 -16.2 -9.2 -3.6 32 203 A D S > S- 0 0 62 48,-0.1 4,-0.8 49,-0.1 5,-0.1 -0.386 89.1 -96.3-109.5-169.4 -14.5 -7.0 -6.2 33 204 A L H > S+ 0 0 31 2,-0.1 4,-2.9 1,-0.1 5,-0.2 0.671 114.9 66.3 -84.9 -15.1 -11.7 -4.4 -6.0 34 205 A N H > S+ 0 0 97 2,-0.2 4,-2.5 3,-0.2 5,-0.4 0.982 95.0 53.4 -70.3 -55.3 -14.2 -1.5 -5.8 35 206 A N H > S+ 0 0 15 2,-0.2 4,-1.1 1,-0.2 -1,-0.2 0.936 121.6 33.5 -44.7 -51.3 -15.7 -2.4 -2.4 36 207 A C H >X S+ 0 0 0 -4,-0.8 3,-1.3 1,-0.2 4,-0.5 0.984 115.6 54.9 -70.0 -56.4 -12.1 -2.5 -1.0 37 208 A K H 3< S+ 0 0 95 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.747 113.3 46.5 -49.6 -20.7 -10.8 0.3 -3.3 38 209 A E H 3< S+ 0 0 102 -4,-2.5 -1,-0.3 -5,-0.2 -2,-0.2 0.716 136.4 2.6 -96.8 -22.0 -13.7 2.4 -1.9 39 210 A N H << S+ 0 0 50 -3,-1.3 2,-0.3 -4,-1.1 -22,-0.3 -0.276 104.1 88.3-161.7 67.2 -13.2 1.6 1.8 40 211 A Y < - 0 0 39 -4,-0.5 19,-0.5 -24,-0.3 -24,-0.3 -0.983 47.6-149.5-162.3 151.3 -10.3 -0.7 2.7 41 212 A E E -A 15 0A 20 -26,-3.9 -26,-1.5 -2,-0.3 2,-0.3 -0.599 13.2-145.7-115.4 179.1 -6.5 -0.5 3.6 42 213 A F E -AB 14 57A 0 15,-3.1 15,-1.6 -28,-0.3 2,-0.7 -0.968 19.5-119.8-150.6 134.9 -3.7 -3.0 2.9 43 214 A L E -AB 13 56A 23 -30,-3.1 -31,-1.1 -2,-0.3 -30,-0.9 -0.584 34.9-158.0 -72.9 112.7 -0.5 -4.1 4.7 44 215 A I E -AB 11 55A 0 11,-3.9 2,-1.3 -2,-0.7 11,-1.2 -0.803 9.6-152.0 -99.3 109.9 2.2 -3.1 2.3 45 216 A K E -A 10 0A 67 -35,-4.0 -35,-1.6 -2,-0.8 -36,-1.1 -0.592 24.7-166.4 -76.3 98.2 5.5 -5.0 2.8 46 217 A W - 0 0 45 -2,-1.3 -38,-0.1 -37,-0.2 8,-0.1 -0.353 42.0 -60.5 -81.4 168.1 7.9 -2.4 1.4 47 218 A T - 0 0 28 -40,-0.5 2,-2.1 1,-0.2 3,-0.3 -0.212 52.7-130.4 -48.1 122.7 11.5 -3.1 0.5 48 219 A D + 0 0 106 1,-0.2 -1,-0.2 -3,-0.1 5,-0.1 -0.488 44.5 158.8 -78.8 78.7 13.1 -4.2 3.8 49 220 A E - 0 0 118 -2,-2.1 -1,-0.2 1,-0.0 4,-0.1 0.947 68.1 -79.8 -68.4 -46.3 16.2 -1.9 3.6 50 221 A S S S+ 0 0 117 -3,-0.3 -2,-0.1 2,-0.2 -1,-0.0 -0.017 119.2 27.6 176.6 -55.9 16.9 -2.1 7.3 51 222 A H S S+ 0 0 163 2,-0.0 2,-0.4 0, 0.0 -3,-0.1 0.566 99.0 93.6-103.7 -11.2 14.7 0.2 9.4 52 223 A L + 0 0 63 -5,-0.1 2,-0.3 3,-0.0 -2,-0.2 -0.674 54.8 175.7 -84.2 130.4 11.7 0.2 7.1 53 224 A H - 0 0 120 -2,-0.4 -7,-0.2 1,-0.2 -9,-0.1 -0.795 40.3 -61.9-128.0 172.5 9.1 -2.5 7.9 54 225 A N - 0 0 38 -2,-0.3 2,-0.3 -9,-0.1 -9,-0.2 -0.074 56.8-173.5 -49.2 153.6 5.6 -3.5 6.6 55 226 A T E -B 44 0A 40 -11,-1.2 -11,-3.9 -13,-0.1 2,-0.9 -0.962 29.9-113.1-147.4 164.2 3.0 -0.8 7.0 56 227 A W E +B 43 0A 75 -2,-0.3 -13,-0.3 -13,-0.3 2,-0.1 -0.762 48.4 158.8-105.7 93.0 -0.8 -0.4 6.4 57 228 A E E -B 42 0A 62 -15,-1.6 -15,-3.1 -2,-0.9 2,-0.3 -0.384 28.5-134.4-101.1-176.1 -1.4 2.0 3.6 58 229 A T >> - 0 0 21 -17,-0.2 3,-4.6 -2,-0.1 4,-3.0 -0.966 32.0-101.3-138.9 155.1 -4.4 2.5 1.3 59 230 A Y H 3> S+ 0 0 20 -19,-0.5 4,-1.9 -2,-0.3 9,-0.1 0.859 121.8 67.2 -44.7 -34.0 -4.8 2.9 -2.5 60 231 A E H 34 S+ 0 0 164 1,-0.2 -1,-0.3 2,-0.2 -19,-0.0 0.670 119.3 21.1 -63.2 -11.2 -5.2 6.6 -1.7 61 232 A S H <4 S+ 0 0 58 -3,-4.6 -2,-0.2 0, 0.0 -1,-0.2 0.569 134.6 37.1-127.9 -24.7 -1.5 6.5 -0.7 62 233 A I H >< S+ 0 0 0 -4,-3.0 2,-1.1 1,-0.1 6,-0.8 0.277 85.2 102.7-112.0 9.6 -0.1 3.4 -2.5 63 234 A G T 3< S+ 0 0 22 -4,-1.9 -1,-0.1 -5,-0.5 -4,-0.1 -0.195 82.8 45.6 -86.4 48.4 -2.2 3.8 -5.7 64 235 A Q T 3 S+ 0 0 133 -2,-1.1 -1,-0.2 -3,-0.1 -2,-0.0 0.136 93.4 67.7-177.5 42.0 0.8 5.2 -7.6 65 236 A V S < S- 0 0 33 -3,-0.7 -57,-1.0 -61,-0.0 -2,-0.1 -0.005 116.6 -78.9-159.8 38.7 4.0 3.1 -7.1 66 237 A R S > S+ 0 0 99 -59,-0.2 4,-1.7 -60,-0.1 5,-0.3 0.456 107.0 111.4 73.6 -3.8 3.5 -0.3 -8.7 67 238 A G H >> + 0 0 0 -5,-0.3 4,-5.1 1,-0.2 5,-0.6 0.988 66.7 58.1 -66.1 -56.4 1.4 -1.2 -5.6 68 239 A L H >5S+ 0 0 50 -6,-0.8 4,-2.7 3,-0.2 5,-0.2 0.855 105.5 54.9 -42.8 -35.1 -1.9 -1.3 -7.4 69 240 A K H >5S+ 0 0 104 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.997 119.6 28.0 -65.3 -59.9 -0.2 -4.0 -9.5 70 241 A R H X5S+ 0 0 105 -4,-1.7 4,-1.0 1,-0.2 -2,-0.2 0.875 124.6 52.4 -69.3 -31.5 0.8 -6.3 -6.6 71 242 A L H X5S+ 0 0 0 -4,-5.1 4,-3.0 -5,-0.3 5,-0.2 0.875 106.8 53.5 -70.6 -34.4 -2.2 -4.9 -4.6 72 243 A D H XS+ 0 0 0 -4,-3.0 4,-2.4 1,-0.2 5,-1.6 0.850 116.3 46.0 -63.2 -29.9 -7.2 -8.1 -3.8 76 247 A K H <5S+ 0 0 93 -4,-1.9 -1,-0.2 3,-0.3 -2,-0.2 0.816 116.0 44.1 -82.5 -28.9 -8.0 -10.7 -6.4 77 248 A Q H <5S+ 0 0 117 -4,-1.1 -2,-0.2 -5,-0.2 -1,-0.2 0.430 135.6 17.6 -92.5 1.7 -6.2 -13.4 -4.4 78 249 A F H <5S+ 0 0 128 -4,-0.8 -3,-0.2 -3,-0.1 -2,-0.2 0.495 138.1 26.8-142.9 -23.7 -7.8 -12.3 -1.2 79 250 A I T <5S+ 0 0 8 -4,-2.4 -3,-0.3 -5,-0.5 2,-0.2 0.556 124.6 15.1-121.1 -13.7 -10.8 -10.1 -2.0 80 251 A I < 0 0 50 -5,-1.6 -48,-0.1 -6,-0.2 -1,-0.0 -0.743 360.0 360.0-143.0-168.2 -12.0 -11.4 -5.4 81 252 A E 0 0 237 -50,-0.2 -5,-0.1 -2,-0.2 -4,-0.1 -0.000 360.0 360.0-169.1 360.0 -11.5 -14.3 -7.8