==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 05-APR-00 1E0Q . COMPND 2 MOLECULE: POLYUBIQUITIN-B; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.ZERELLA,P.Y.CHEN,P.A.EVANS,A.RAINE,D.H.WILLIAMS . 17 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2207.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 41.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 166 0, 0.0 16,-0.8 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 136.3 -13.2 2.1 -0.9 2 2 A Q E +A 16 0A 144 14,-0.1 2,-0.3 15,-0.1 14,-0.2 -0.984 360.0 168.8-124.9 129.4 -9.5 2.0 -2.3 3 3 A I E -A 15 0A 108 12,-1.4 12,-2.1 -2,-0.4 2,-0.2 -0.964 21.3-143.3-146.1 120.8 -6.4 3.6 -0.5 4 4 A F E -A 14 0A 176 -2,-0.3 2,-0.3 10,-0.2 10,-0.1 -0.636 13.1-171.0 -90.9 144.8 -2.7 3.0 -1.5 5 5 A V E -A 13 0A 77 8,-0.8 8,-1.0 -2,-0.2 2,-0.3 -0.995 1.2-170.6-140.6 131.7 0.5 2.7 0.8 6 6 A K E -A 12 0A 180 -2,-0.3 2,-0.3 6,-0.1 6,-0.2 -0.951 7.5-151.9-127.3 144.1 4.3 2.6 -0.0 7 7 A T E >> -A 11 0A 81 4,-1.3 4,-0.7 -2,-0.3 3,-0.6 -0.876 21.5-133.0-116.5 145.7 7.5 1.9 2.1 8 8 A L T 34 S+ 0 0 195 -2,-0.3 -1,-0.0 1,-0.2 -2,-0.0 0.599 102.9 67.8 -68.4 -17.5 11.3 3.1 1.6 9 9 A D T 34 S- 0 0 166 2,-0.1 -1,-0.2 1,-0.0 0, 0.0 0.817 124.5 -86.6 -71.6 -38.7 12.5 -0.7 2.2 10 10 A G T <4 S+ 0 0 69 -3,-0.6 2,-0.3 1,-0.2 -2,-0.1 0.662 78.7 130.6 124.0 60.2 10.9 -2.0 -1.2 11 11 A K E < -A 7 0A 154 -4,-0.7 -4,-1.3 2,-0.0 2,-0.3 -0.986 29.0-173.1-139.0 142.4 7.2 -3.1 -0.7 12 12 A T E +A 6 0A 107 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.1 -0.975 22.4 145.8-140.9 116.5 3.9 -2.4 -2.7 13 13 A I E -A 5 0A 128 -8,-1.0 -8,-0.8 -2,-0.3 2,-0.2 -0.961 40.5-118.0-154.4 139.7 0.3 -3.6 -1.4 14 14 A T E -A 4 0A 75 -2,-0.3 2,-0.6 -10,-0.1 -10,-0.2 -0.579 14.9-142.2 -83.2 142.3 -3.4 -2.2 -1.4 15 15 A L E +A 3 0A 90 -12,-2.1 -12,-1.4 -2,-0.2 2,-0.3 -0.943 34.3 165.2-109.2 105.4 -5.4 -1.2 1.7 16 16 A E E A 2 0A 120 -2,-0.6 -14,-0.1 -14,-0.2 -2,-0.0 -0.963 360.0 360.0-128.6 143.4 -9.2 -2.3 1.2 17 17 A V 0 0 171 -16,-0.8 -1,-0.1 -2,-0.3 -15,-0.1 0.552 360.0 360.0-132.5 360.0 -12.3 -2.7 3.6