==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER REPLICATION 07-OCT-06 2E0G . COMPND 2 MOLECULE: CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K12; . AUTHOR Y.ABE,T.KATAYAMA,T.UEDA,RIKEN STRUCTURAL . 107 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9174.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 49.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 169 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -53.5 -0.1 1.5 -2.4 2 2 A L - 0 0 127 4,-0.0 2,-0.3 3,-0.0 3,-0.1 -0.849 360.0-152.6-107.5 141.4 1.3 -1.8 -3.8 3 3 A S > - 0 0 50 -2,-0.4 4,-2.5 1,-0.1 5,-0.2 -0.838 23.2-122.5-113.0 149.8 3.9 -2.1 -6.5 4 4 A L H > S+ 0 0 36 -2,-0.3 4,-3.0 2,-0.2 5,-0.2 0.949 112.2 48.2 -50.8 -57.2 4.5 -5.0 -9.0 5 5 A W H > S+ 0 0 61 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.956 110.5 50.1 -48.6 -63.2 8.1 -5.5 -7.9 6 6 A Q H > S+ 0 0 117 1,-0.3 4,-2.4 2,-0.2 5,-0.3 0.905 113.7 46.1 -42.0 -55.6 7.3 -5.5 -4.2 7 7 A Q H X S+ 0 0 60 -4,-2.5 4,-3.1 1,-0.2 -1,-0.3 0.915 109.1 55.4 -56.0 -46.4 4.6 -8.0 -4.7 8 8 A C H X S+ 0 0 0 -4,-3.0 4,-1.9 -5,-0.2 -1,-0.2 0.880 110.1 47.3 -54.9 -40.7 6.8 -10.1 -6.9 9 9 A L H X S+ 0 0 42 -4,-2.4 4,-2.4 -3,-0.2 5,-0.3 0.982 114.5 42.8 -65.6 -59.2 9.4 -10.2 -4.1 10 10 A A H X S+ 0 0 65 -4,-2.4 4,-1.6 1,-0.2 -2,-0.2 0.869 113.9 54.2 -55.3 -38.8 7.0 -11.2 -1.3 11 11 A R H X S+ 0 0 77 -4,-3.1 4,-2.8 -5,-0.3 -1,-0.2 0.895 110.1 45.6 -63.5 -41.2 5.4 -13.7 -3.6 12 12 A L H X S+ 0 0 5 -4,-1.9 4,-1.0 -5,-0.2 -2,-0.2 0.839 115.7 46.3 -71.0 -33.8 8.7 -15.3 -4.4 13 13 A Q H < S+ 0 0 75 -4,-2.4 -2,-0.2 2,-0.2 -1,-0.2 0.687 117.8 44.1 -80.9 -19.7 9.6 -15.4 -0.7 14 14 A D H < S+ 0 0 130 -4,-1.6 -2,-0.2 -5,-0.3 -3,-0.2 0.823 107.9 55.5 -91.5 -38.4 6.2 -16.7 0.2 15 15 A E H < S- 0 0 108 -4,-2.8 -2,-0.2 -5,-0.2 -3,-0.2 0.840 128.0 -6.9 -63.4 -33.7 5.9 -19.3 -2.5 16 16 A L < - 0 0 102 -4,-1.0 -1,-0.2 -5,-0.2 0, 0.0 -0.987 67.6-108.6-158.6 161.6 9.1 -20.9 -1.3 17 17 A P S S+ 0 0 106 0, 0.0 2,-0.4 0, 0.0 -4,-0.1 0.598 71.4 132.0 -69.7 -10.6 12.0 -20.3 1.1 18 18 A A + 0 0 33 1,-0.2 3,-0.3 -6,-0.2 -2,-0.2 -0.230 26.7 171.6 -48.2 100.4 14.2 -19.6 -1.9 19 19 A T >> + 0 0 73 -2,-0.4 3,-2.3 1,-0.2 4,-0.6 0.569 55.8 93.4 -90.3 -11.4 15.9 -16.4 -0.7 20 20 A E H >> S+ 0 0 94 1,-0.3 3,-2.6 2,-0.2 4,-1.8 0.873 76.1 64.5 -47.7 -42.4 18.3 -16.4 -3.6 21 21 A F H 34 S+ 0 0 13 -3,-0.3 5,-0.3 1,-0.3 -1,-0.3 0.815 94.3 60.7 -52.3 -31.8 15.8 -14.1 -5.4 22 22 A S H <> S+ 0 0 39 -3,-2.3 4,-0.9 1,-0.2 -1,-0.3 0.715 107.9 44.3 -69.4 -20.4 16.6 -11.6 -2.7 23 23 A M H << S+ 0 0 134 -3,-2.6 -2,-0.2 -4,-0.6 -1,-0.2 0.749 114.4 47.2 -93.3 -29.6 20.2 -11.6 -3.8 24 24 A W T < S+ 0 0 84 -4,-1.8 -2,-0.2 2,-0.1 -1,-0.2 -0.013 124.8 31.3-100.8 28.1 19.5 -11.5 -7.6 25 25 A I T >4 S+ 0 0 1 -3,-0.3 3,-0.8 -5,-0.2 -3,-0.2 0.422 100.8 71.8-148.0 -39.1 17.0 -8.7 -7.2 26 26 A R T 3< S+ 0 0 205 -4,-0.9 -3,-0.1 -5,-0.3 -2,-0.1 0.954 107.3 39.6 -50.5 -58.3 18.0 -6.5 -4.3 27 27 A P T 3 S+ 0 0 95 0, 0.0 -1,-0.3 0, 0.0 2,-0.2 0.571 108.6 86.8 -69.8 -8.4 21.0 -5.0 -6.2 28 28 A L S < S- 0 0 7 -3,-0.8 2,-0.5 13,-0.1 13,-0.2 -0.499 74.7-133.4 -91.2 162.5 18.8 -4.9 -9.3 29 29 A Q E -A 40 0A 102 11,-2.0 11,-1.6 -2,-0.2 2,-0.2 -0.938 16.9-157.1-122.4 110.3 16.4 -2.1 -10.3 30 30 A A E -A 39 0A 9 -2,-0.5 2,-0.4 9,-0.2 9,-0.2 -0.563 4.4-157.8 -85.0 148.1 12.9 -3.0 -11.4 31 31 A E E -A 38 0A 78 7,-1.8 7,-3.1 -2,-0.2 2,-0.4 -0.986 6.4-145.7-131.7 124.7 10.8 -0.7 -13.6 32 32 A L E -A 37 0A 81 -2,-0.4 5,-0.2 5,-0.2 41,-0.0 -0.745 14.3-179.0 -91.1 130.8 7.0 -0.8 -14.0 33 33 A S - 0 0 59 3,-1.2 4,-0.1 -2,-0.4 -1,-0.1 0.002 60.4 -97.1-115.1 25.9 5.5 0.0 -17.4 34 34 A D S S+ 0 0 145 1,-0.1 3,-0.1 2,-0.1 -2,-0.1 0.370 122.0 18.9 75.4 -6.9 1.9 -0.3 -16.3 35 35 A N S S+ 0 0 68 1,-0.2 37,-1.9 37,-0.1 2,-0.3 0.218 117.5 69.0-175.6 17.6 2.1 -3.8 -17.7 36 36 A T E - b 0 72A 29 35,-0.2 -3,-1.2 2,-0.0 2,-1.0 -0.858 57.9-156.0-153.4 113.1 5.7 -4.7 -17.9 37 37 A L E -Ab 32 73A 1 35,-3.2 37,-2.6 -2,-0.3 -5,-0.2 -0.766 21.5-167.0 -93.3 98.7 8.1 -5.3 -15.0 38 38 A A E -A 31 0A 2 -7,-3.1 -7,-1.8 -2,-1.0 2,-0.4 -0.392 7.3-145.6 -81.6 161.4 11.6 -4.6 -16.3 39 39 A L E -A 30 0A 1 35,-0.3 37,-2.2 -9,-0.2 2,-0.6 -0.990 4.1-158.3-134.2 126.6 14.8 -5.6 -14.4 40 40 A Y E +Ac 29 76A 42 -11,-1.6 -11,-2.0 -2,-0.4 37,-0.2 -0.906 19.9 172.9-108.0 116.4 18.1 -3.7 -14.4 41 41 A A E - c 0 77A 4 35,-2.7 37,-1.9 -2,-0.6 -13,-0.1 -0.786 44.9-115.2-119.1 163.1 21.2 -5.6 -13.5 42 42 A P S S+ 0 0 89 0, 0.0 2,-0.3 0, 0.0 35,-0.1 0.624 98.6 1.3 -69.7 -13.1 25.0 -4.9 -13.4 43 43 A N S > S- 0 0 60 33,-0.2 4,-0.8 1,-0.1 35,-0.2 -0.929 77.5 -99.5-159.4-179.7 25.4 -7.5 -16.2 44 44 A R H > S+ 0 0 191 -2,-0.3 4,-2.4 2,-0.2 5,-0.2 0.781 109.5 71.0 -81.7 -29.2 23.7 -10.0 -18.4 45 45 A F H > S+ 0 0 169 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.944 99.0 46.8 -51.3 -55.2 24.5 -12.9 -16.2 46 46 A V H > S+ 0 0 14 1,-0.2 4,-3.5 2,-0.2 5,-0.3 0.913 109.2 56.1 -54.6 -46.2 22.1 -11.8 -13.5 47 47 A L H X S+ 0 0 20 -4,-0.8 4,-3.4 1,-0.2 5,-0.3 0.952 107.7 46.7 -51.3 -57.6 19.4 -11.2 -16.1 48 48 A D H X S+ 0 0 107 -4,-2.4 4,-0.5 2,-0.2 -1,-0.2 0.909 116.1 46.5 -52.0 -46.9 19.6 -14.8 -17.4 49 49 A W H >X S+ 0 0 83 -4,-2.2 4,-1.6 -5,-0.2 3,-1.5 0.973 114.7 44.5 -60.9 -57.7 19.5 -16.2 -13.9 50 50 A V H 3<>S+ 0 0 2 -4,-3.5 5,-1.7 1,-0.3 4,-0.5 0.917 112.0 52.7 -53.4 -47.7 16.7 -14.0 -12.6 51 51 A R H 3<5S+ 0 0 106 -4,-3.4 5,-0.3 -5,-0.3 -1,-0.3 0.648 105.2 60.6 -64.1 -13.6 14.7 -14.7 -15.8 52 52 A D H <<5S+ 0 0 84 -3,-1.5 4,-0.4 -4,-0.5 -1,-0.2 0.937 129.0 0.9 -78.8 -51.3 15.3 -18.4 -15.0 53 53 A K T X5S+ 0 0 77 -4,-1.6 4,-2.2 -3,-0.1 5,-0.2 0.850 131.5 53.1-101.5 -62.2 13.6 -18.5 -11.6 54 54 A Y H >5S+ 0 0 1 -4,-0.5 4,-3.3 -5,-0.3 5,-0.2 0.893 108.5 54.6 -40.3 -54.3 12.2 -15.0 -10.9 55 55 A L H > S+ 0 0 115 -4,-0.4 4,-2.4 -5,-0.3 -1,-0.2 0.887 115.6 46.5 -42.1 -49.9 8.6 -18.4 -13.6 57 57 A N H X S+ 0 0 34 -4,-2.2 4,-1.8 2,-0.2 -2,-0.2 0.976 114.5 44.8 -59.0 -59.6 7.5 -17.0 -10.2 58 58 A I H >X S+ 0 0 0 -4,-3.3 4,-3.3 1,-0.2 3,-0.7 0.945 112.6 51.7 -49.8 -57.2 6.4 -13.6 -11.4 59 59 A N H 3X S+ 0 0 75 -4,-3.2 4,-2.3 1,-0.3 5,-0.4 0.926 107.4 52.5 -46.4 -55.1 4.5 -15.1 -14.4 60 60 A G H 3X S+ 0 0 44 -4,-2.4 4,-1.8 -5,-0.3 -1,-0.3 0.848 114.5 43.5 -51.6 -37.1 2.6 -17.5 -12.2 61 61 A L H S+ 0 0 4 -4,-3.3 4,-1.4 1,-0.2 5,-1.1 0.903 117.7 34.4 -46.7 -49.0 0.7 -12.2 -12.9 63 63 A T H <5S+ 0 0 88 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.870 114.4 57.3 -75.5 -38.6 -1.8 -14.7 -14.2 64 64 A S H <5S+ 0 0 81 -4,-1.8 -2,-0.2 -5,-0.4 -1,-0.2 0.722 106.2 53.8 -64.7 -20.5 -2.8 -16.0 -10.7 65 65 A F H <5S- 0 0 141 -4,-2.2 -1,-0.2 -3,-0.1 -2,-0.2 0.933 143.5 -32.2 -79.0 -50.2 -3.7 -12.4 -9.9 66 66 A C T <5 - 0 0 82 -4,-1.4 2,-0.8 -5,-0.2 -3,-0.2 0.516 64.6-153.3-137.3 -48.9 -6.1 -11.8 -12.8 67 67 A G S