==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN FIBRIL 04-MAR-12 4E0L . COMPND 2 MOLECULE: CYCLIC PSEUDO-PEPTIDE FYLLYYT(ORN)KN(HAO)SA(ORN); . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.ZHAO,C.LIU,S.R.MICHAEL,D.EISENBERG . 52 12 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4874.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 23.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 4 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A X 0 0 124 0, 0.0 2,-0.6 0, 0.0 22,-0.0 0.000 360.0 360.0 360.0 149.4 22.0 -1.6 19.0 2 1 A F - 0 0 97 13,-2.8 13,-2.0 20,-0.0 2,-0.4 -0.927 360.0-165.2 -93.3 117.3 20.3 -2.6 15.7 3 2 A Y E +A 23 0A 103 20,-3.3 20,-2.1 -2,-0.6 2,-0.4 -0.892 10.0 179.9-104.9 128.0 18.7 0.4 14.0 4 3 A L E +A 22 0A 62 -2,-0.4 2,-0.3 18,-0.2 18,-0.2 -0.997 9.5 176.5-132.5 133.7 16.2 -0.4 11.1 5 4 A L E +A 21 0A 120 16,-2.3 16,-2.6 -2,-0.4 2,-0.3 -0.993 12.6 170.3-133.5 133.4 14.2 1.9 8.9 6 5 A Y E -A 20 0A 68 -2,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.980 22.4-164.5-146.2 158.9 12.0 0.7 6.1 7 6 A Y E A 19 0A 75 12,-2.4 12,-1.9 -2,-0.3 5,-0.2 -0.971 360.0 360.0-143.3 120.3 9.4 1.9 3.6 8 7 A T 0 0 17 3,-2.9 10,-0.1 -2,-0.3 4,-0.1 0.398 360.0 360.0-103.4 360.0 7.2 -0.5 1.6 9 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 10 8 A X 0 0 126 0, 0.0 2,-0.3 0, 0.0 46,-0.0 0.000 360.0 360.0 360.0 155.4 2.4 1.1 1.6 11 9 A K 0 0 143 0, 0.0 -3,-2.9 0, 0.0 0, 0.0 -0.914 360.0 360.0-151.9 146.2 3.9 1.4 5.3 12 10 A N 0 0 120 -2,-0.3 -5,-0.3 -5,-0.2 -7,-0.0 -0.881 360.0 360.0-105.3 360.0 6.9 3.0 7.1 13 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 14 12 A S 0 0 122 0, 0.0 -11,-0.2 0, 0.0 -9,-0.0 0.000 360.0 360.0 360.0 74.0 16.1 1.0 17.4 15 13 A A 0 0 76 -13,-2.0 -13,-2.8 0, 0.0 0, 0.0 -0.809 360.0 360.0-100.3 360.0 16.8 -2.1 19.5 16 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 17 0 B X 0 0 151 0, 0.0 2,-0.1 0, 0.0 -9,-0.0 0.000 360.0 360.0 360.0 159.7 10.9 3.9 -4.4 18 1 B F + 0 0 30 13,-2.1 13,-2.7 -10,-0.1 2,-0.3 -0.380 360.0 176.2 -86.8 157.2 10.9 1.3 -1.6 19 2 B Y E -A 7 0A 84 -12,-1.9 -12,-2.4 11,-0.2 2,-0.3 -0.991 27.5-160.8-157.5 160.9 13.9 1.1 0.9 20 3 B L E -A 6 0A 32 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.969 15.6-176.5-137.8 140.4 15.5 -0.4 3.9 21 4 B L E +A 5 0A 108 -16,-2.6 -16,-2.3 -2,-0.3 2,-0.3 -0.992 6.0 179.3-137.3 140.6 18.3 1.1 5.9 22 5 B Y E -A 4 0A 101 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -0.973 13.0-173.2-145.1 159.5 20.2 -0.3 8.9 23 6 B Y E A 3 0A 109 -20,-2.1 -20,-3.3 -2,-0.3 5,-0.2 -0.975 360.0 360.0-152.5 135.6 23.0 0.4 11.3 24 7 B T 0 0 68 3,-2.5 4,-0.1 -2,-0.3 -1,-0.1 0.276 360.0 360.0-121.0 360.0 24.7 -1.7 14.1 25 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 26 8 B X 0 0 129 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 129.2 29.6 -1.7 13.3 27 9 B K 0 0 151 0, 0.0 -3,-2.5 0, 0.0 0, 0.0 -0.803 360.0 360.0-120.6 148.8 27.7 -2.1 10.0 28 10 B N 0 0 150 -2,-0.3 -5,-0.2 -5,-0.2 -7,-0.0 -0.910 360.0 360.0-140.1 360.0 25.8 0.4 7.8 29 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 30 12 B S 0 0 104 0, 0.0 -11,-0.2 0, 0.0 -12,-0.0 0.000 360.0 360.0 360.0 155.4 16.4 0.9 -2.4 31 13 B A 0 0 6 -13,-2.7 -13,-2.1 5,-0.0 23,-0.0 -0.901 360.0 360.0-135.1 360.0 14.1 -0.2 -5.3 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 0 C X 0 0 81 0, 0.0 2,-0.6 0, 0.0 22,-0.0 0.000 360.0 360.0 360.0 161.9 7.6 -5.9 4.7 34 1 C F - 0 0 0 13,-2.3 13,-2.3 -15,-0.1 2,-0.5 -0.803 360.0-164.8 -98.1 113.2 10.3 -4.9 2.0 35 2 C Y E -B 55 0B 109 20,-2.6 20,-1.9 -2,-0.6 2,-0.4 -0.895 10.5-179.4-102.7 125.3 12.4 -7.9 0.8 36 3 C L E +B 54 0B 44 -2,-0.5 2,-0.4 18,-0.2 18,-0.2 -1.000 9.4 174.9-133.1 132.4 15.5 -7.0 -1.1 37 4 C L E +B 53 0B 100 16,-2.6 16,-2.5 -2,-0.4 2,-0.3 -0.999 11.1 169.7-135.2 133.7 18.1 -9.3 -2.6 38 5 C Y E -B 52 0B 81 -2,-0.4 2,-0.4 14,-0.2 14,-0.2 -0.986 24.5-163.4-146.9 161.5 21.1 -8.3 -4.7 39 6 C Y E B 51 0B 77 12,-2.3 12,-1.8 -2,-0.3 5,-0.2 -0.969 360.0 360.0-143.9 117.2 24.4 -9.4 -6.3 40 7 C T 0 0 67 3,-2.6 10,-0.1 -2,-0.4 4,-0.1 0.315 360.0 360.0 -98.7 360.0 27.0 -6.8 -7.5 41 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 42 8 C X 0 0 123 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 112.9 31.3 -8.2 -5.9 43 9 C K 0 0 124 0, 0.0 -3,-2.6 0, 0.0 0, 0.0 -0.915 360.0 360.0-135.5 159.3 29.1 -8.8 -3.1 44 10 C N 0 0 135 -2,-0.3 -5,-0.2 -5,-0.2 -7,-0.0 -0.855 360.0 360.0-115.0 360.0 25.7 -10.4 -2.0 45 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 46 12 C S 0 0 110 0, 0.0 -11,-0.2 0, 0.0 -26,-0.0 0.000 360.0 360.0 360.0 77.9 13.7 -8.5 4.9 47 13 C A 0 0 2 -13,-2.3 -13,-2.3 -40,-0.1 -28,-0.1 -0.788 360.0 360.0 -96.9 360.0 12.5 -5.4 6.7 48 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 49 0 D X 0 0 148 0, 0.0 2,-0.1 0, 0.0 -9,-0.0 0.000 360.0 360.0 360.0 154.6 25.3 -11.3 -14.3 50 1 D F + 0 0 110 13,-2.4 13,-2.5 -10,-0.1 2,-0.3 -0.449 360.0 179.5 -86.4 155.9 24.4 -8.8 -11.6 51 2 D Y E -B 39 0B 88 -12,-1.8 -12,-2.3 11,-0.2 2,-0.3 -0.999 26.6-163.1-153.7 159.7 20.9 -8.6 -10.2 52 3 D L E -B 38 0B 96 -2,-0.3 2,-0.3 -14,-0.2 -14,-0.2 -0.989 15.3-178.4-138.4 143.2 18.5 -7.0 -7.8 53 4 D L E +B 37 0B 101 -16,-2.5 -16,-2.6 -2,-0.3 2,-0.3 -0.993 5.0 175.4-140.3 144.5 15.1 -8.5 -6.7 54 5 D Y E -B 36 0B 77 -2,-0.3 2,-0.3 -18,-0.2 -18,-0.2 -0.985 13.4-170.1-150.8 158.2 12.5 -7.2 -4.4 55 6 D Y E B 35 0B 113 -20,-1.9 -20,-2.6 -2,-0.3 5,-0.2 -0.985 360.0 360.0-148.5 137.5 9.0 -7.8 -3.0 56 7 D T 0 0 24 3,-2.6 4,-0.1 -2,-0.3 -1,-0.1 0.317 360.0 360.0-119.2 360.0 6.6 -5.7 -1.0 57 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 58 8 D X 0 0 127 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 129.3 2.1 -5.3 -3.4 59 9 D K 0 0 115 0, 0.0 -3,-2.6 0, 0.0 0, 0.0 -0.746 360.0 360.0-117.7 158.4 5.0 -5.3 -5.7 60 10 D N 0 0 147 -2,-0.3 -5,-0.2 -5,-0.2 -7,-0.0 -0.904 360.0 360.0-145.3 360.0 7.5 -7.8 -7.1 61 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 62 12 D S 0 0 135 0, 0.0 -11,-0.2 0, 0.0 -9,-0.0 0.000 360.0 360.0 360.0 159.0 19.5 -8.3 -14.1 63 13 D A 0 0 64 -13,-2.5 -13,-2.4 0, 0.0 -12,-0.0 -0.882 360.0 360.0-136.8 360.0 22.6 -7.2 -16.1