==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING DOMAIN 25-APR-00 1E17 . COMPND 2 MOLECULE: AFX; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.WEIGELT,I.CLIMENT,K.DAHLMAN-WRIGHT,M.WIKSTROM . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6723.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 8.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 36.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 92 A S 0 0 145 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -42.6 -6.1 16.7 14.0 2 93 A R + 0 0 216 2,-0.0 2,-0.3 6,-0.0 0, 0.0 0.008 360.0 132.1 -99.8 28.9 -4.5 18.8 11.2 3 94 A R + 0 0 174 5,-0.1 2,-0.3 2,-0.0 5,-0.2 -0.631 24.5 112.8 -83.9 137.8 -5.4 16.3 8.6 4 95 A N > + 0 0 112 -2,-0.3 3,-0.7 3,-0.2 2,-0.5 -0.922 27.5 78.3-173.6-163.0 -7.0 17.5 5.4 5 96 A A T 3 S+ 0 0 87 -2,-0.3 3,-0.1 1,-0.3 -2,-0.0 -0.675 109.9 18.2 82.5-124.3 -6.5 17.9 1.6 6 97 A W T 3 S- 0 0 134 -2,-0.5 -1,-0.3 1,-0.2 2,-0.2 0.846 133.8 -67.9 -51.8 -30.7 -7.0 14.7 -0.3 7 98 A G < - 0 0 20 -3,-0.7 2,-1.6 2,-0.1 -3,-0.2 -0.500 37.1 -97.7 147.1 142.5 -8.9 13.4 2.8 8 99 A N S S+ 0 0 109 -5,-0.2 2,-0.1 -2,-0.2 -5,-0.1 0.014 70.2 151.5 -72.2 36.6 -8.3 12.4 6.4 9 100 A Q - 0 0 96 -2,-1.6 2,-0.2 -5,-0.1 -2,-0.1 -0.400 47.0-118.8 -70.1 147.4 -8.2 8.8 5.1 10 101 A S > - 0 0 65 1,-0.1 4,-1.6 -2,-0.1 3,-0.5 -0.529 18.6-119.0 -84.5 153.9 -6.1 6.4 7.2 11 102 A Y H > S+ 0 0 63 1,-0.2 4,-2.9 2,-0.2 5,-0.3 0.886 112.1 64.1 -62.2 -34.9 -3.1 4.7 5.5 12 103 A A H > S+ 0 0 21 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.931 103.1 49.3 -55.5 -41.5 -4.7 1.2 6.1 13 104 A E H > S+ 0 0 98 -3,-0.5 4,-1.9 2,-0.2 -1,-0.2 0.939 111.3 47.8 -64.4 -45.0 -7.5 2.3 3.8 14 105 A L H X S+ 0 0 9 -4,-1.6 4,-1.7 1,-0.2 -2,-0.2 0.929 111.5 50.4 -64.4 -41.0 -5.2 3.5 1.0 15 106 A I H X S+ 0 0 0 -4,-2.9 4,-2.0 1,-0.2 5,-0.2 0.928 107.4 54.8 -63.3 -40.8 -3.1 0.3 1.3 16 107 A S H X S+ 0 0 7 -4,-2.2 4,-3.4 -5,-0.3 5,-0.3 0.932 104.1 54.9 -58.0 -43.9 -6.3 -1.8 1.0 17 108 A Q H X S+ 0 0 74 -4,-1.9 4,-2.6 1,-0.2 -1,-0.2 0.935 105.4 52.7 -57.4 -44.9 -7.2 -0.1 -2.2 18 109 A A H X S+ 0 0 0 -4,-1.7 4,-1.7 2,-0.2 -1,-0.2 0.968 114.9 39.8 -57.7 -52.5 -3.8 -0.9 -3.8 19 110 A I H < S+ 0 0 1 -4,-2.0 3,-0.4 1,-0.2 7,-0.2 0.963 117.1 49.6 -63.3 -46.9 -4.2 -4.7 -3.0 20 111 A E H < S+ 0 0 108 -4,-3.4 -1,-0.2 -5,-0.2 -2,-0.2 0.844 108.0 56.2 -60.2 -29.9 -7.9 -4.6 -3.9 21 112 A S H < S+ 0 0 70 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.872 93.4 81.9 -71.7 -33.8 -6.9 -2.8 -7.2 22 113 A A S < S- 0 0 18 -4,-1.7 5,-0.1 -3,-0.4 0, 0.0 -0.436 78.8-137.5 -71.1 146.5 -4.6 -5.6 -8.1 23 114 A P S S+ 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -4,-0.0 0.977 106.1 42.2 -68.3 -57.1 -6.2 -8.7 -9.8 24 115 A E S S- 0 0 145 2,-0.1 3,-0.1 1,-0.1 -2,-0.1 0.723 109.2-131.0 -62.8 -17.7 -4.3 -11.4 -7.9 25 116 A K + 0 0 136 1,-0.2 2,-0.3 -6,-0.2 60,-0.3 0.982 67.0 114.6 65.2 55.2 -4.9 -9.2 -4.9 26 117 A R + 0 0 124 -7,-0.2 2,-0.3 -8,-0.2 -1,-0.2 -0.964 35.3 171.7-155.6 136.8 -1.3 -9.3 -3.8 27 118 A L E -A 83 0A 26 56,-1.4 56,-2.4 -2,-0.3 2,-0.1 -1.000 24.2-131.0-147.3 145.8 1.6 -6.7 -3.5 28 119 A T E > -A 82 0A 17 -2,-0.3 4,-1.6 54,-0.2 54,-0.1 -0.332 38.3 -97.6 -87.8 175.7 5.1 -6.7 -2.0 29 120 A L H > S+ 0 0 56 52,-0.5 4,-1.6 1,-0.2 3,-0.3 0.959 124.6 49.9 -60.1 -49.9 6.4 -4.0 0.3 30 121 A A H > S+ 0 0 49 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.879 106.4 57.6 -58.6 -35.3 8.2 -2.1 -2.5 31 122 A Q H > S+ 0 0 79 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.912 101.1 54.9 -65.0 -39.3 5.0 -2.2 -4.6 32 123 A I H X S+ 0 0 0 -4,-1.6 4,-2.5 -3,-0.3 -1,-0.2 0.947 109.0 49.2 -59.3 -44.2 3.0 -0.4 -1.9 33 124 A Y H X S+ 0 0 37 -4,-1.6 4,-1.7 2,-0.2 5,-0.2 0.974 113.5 44.0 -59.2 -55.2 5.6 2.4 -1.9 34 125 A E H X S+ 0 0 114 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.917 112.9 53.5 -58.6 -41.7 5.5 2.8 -5.7 35 126 A W H X S+ 0 0 21 -4,-2.9 4,-4.5 -5,-0.2 5,-0.5 0.943 103.1 56.3 -60.7 -46.5 1.7 2.6 -5.7 36 127 A M H X S+ 0 0 3 -4,-2.5 4,-2.4 -5,-0.2 7,-0.2 0.935 108.1 48.0 -53.2 -44.9 1.3 5.4 -3.2 37 128 A V H < S+ 0 0 42 -4,-1.7 -1,-0.2 2,-0.2 7,-0.2 0.925 116.9 43.9 -62.7 -39.7 3.3 7.7 -5.4 38 129 A R H < S+ 0 0 175 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.928 122.0 37.0 -71.2 -44.3 1.1 6.6 -8.3 39 130 A T H < S+ 0 0 54 -4,-4.5 -2,-0.2 1,-0.3 -1,-0.2 0.672 129.7 36.1 -83.2 -13.2 -2.1 6.9 -6.3 40 131 A V >< + 0 0 20 -4,-2.4 3,-2.4 -5,-0.5 -1,-0.3 -0.555 64.0 177.7-139.2 75.5 -0.9 10.0 -4.5 41 132 A P G >> S+ 0 0 75 0, 0.0 3,-3.3 0, 0.0 4,-0.5 0.734 70.2 86.1 -47.7 -26.1 1.2 12.2 -6.8 42 133 A Y G 34 S+ 0 0 168 1,-0.3 3,-0.3 2,-0.2 4,-0.3 0.753 85.7 57.5 -52.4 -19.9 1.6 14.7 -3.9 43 134 A F G <> S+ 0 0 20 -3,-2.4 4,-1.5 -7,-0.2 3,-0.4 0.583 81.0 85.3 -89.0 -8.4 4.5 12.5 -2.9 44 135 A K H <> S+ 0 0 121 -3,-3.3 4,-0.7 1,-0.2 -1,-0.2 0.884 85.2 58.1 -60.4 -35.2 6.4 12.9 -6.3 45 136 A D H < S+ 0 0 114 -4,-0.5 3,-0.5 -3,-0.3 -1,-0.2 0.889 107.1 46.3 -63.7 -37.1 7.9 16.1 -5.0 46 137 A K H >4 S+ 0 0 92 -3,-0.4 3,-2.9 -4,-0.3 6,-0.5 0.779 94.5 77.4 -76.8 -25.0 9.5 14.3 -2.0 47 138 A G H 3< S+ 0 0 50 -4,-1.5 -1,-0.2 1,-0.3 -2,-0.2 0.868 91.6 54.4 -53.8 -33.9 10.8 11.5 -4.3 48 139 A D T 3< S+ 0 0 148 -4,-0.7 2,-0.3 -3,-0.5 -1,-0.3 0.486 109.2 61.9 -79.2 0.7 13.6 13.9 -5.4 49 140 A S S X S- 0 0 62 -3,-2.9 3,-1.4 1,-0.1 4,-0.1 -0.893 87.8-118.2-127.1 158.1 14.5 14.4 -1.7 50 141 A N T > S+ 0 0 140 -2,-0.3 3,-2.6 1,-0.3 4,-0.4 0.822 98.6 89.2 -61.6 -30.6 15.8 12.1 1.1 51 142 A S T >> + 0 0 76 1,-0.3 3,-1.5 2,-0.2 4,-0.9 0.689 67.8 84.0 -44.2 -13.6 12.6 12.9 3.1 52 143 A S H <> S+ 0 0 27 -3,-1.4 4,-1.4 -6,-0.5 -1,-0.3 0.911 78.7 61.9 -59.8 -40.4 11.2 9.9 1.2 53 144 A A H <> S+ 0 0 66 -3,-2.6 4,-0.8 1,-0.2 -1,-0.3 0.663 98.8 61.4 -61.6 -13.5 12.7 7.5 3.8 54 145 A G H X> S+ 0 0 33 -3,-1.5 4,-1.2 -4,-0.4 3,-1.0 0.975 105.2 36.7 -78.8 -70.8 10.5 9.2 6.5 55 146 A W H 3X S+ 0 0 27 -4,-0.9 4,-1.5 1,-0.2 -2,-0.2 0.824 110.0 66.5 -53.5 -30.1 6.9 8.5 5.4 56 147 A K H 3X S+ 0 0 51 -4,-1.4 4,-1.5 1,-0.2 -1,-0.2 0.936 98.0 51.5 -60.8 -42.6 7.9 5.0 4.1 57 148 A N H X S+ 0 0 32 -4,-1.2 4,-1.2 1,-0.2 3,-0.6 0.947 102.8 51.0 -55.0 -45.2 5.2 5.0 8.9 59 150 A I H 3X S+ 0 0 0 -4,-1.5 4,-1.9 1,-0.2 3,-0.4 0.907 101.2 62.8 -59.2 -40.8 3.6 2.6 6.4 60 151 A R H 3X S+ 0 0 137 -4,-1.5 4,-1.7 1,-0.2 -1,-0.2 0.879 98.1 56.2 -55.3 -36.3 5.8 -0.2 7.8 61 152 A H H S- 0 0 121 1,-0.2 3,-1.5 2,-0.1 -1,-0.1 0.923 77.6-131.2 61.5 95.0 -3.4 -4.3 12.8 67 158 A S T 3 S+ 0 0 100 1,-0.3 -1,-0.2 3,-0.0 -2,-0.1 0.502 82.3 114.3 -57.4 6.7 -3.4 -8.0 11.9 68 159 A K T 3 S+ 0 0 102 -6,-0.1 18,-1.1 17,-0.1 2,-0.4 0.830 70.6 59.7 -49.4 -28.0 -5.6 -6.7 9.0 69 160 A F E < S-B 85 0A 12 -3,-1.5 2,-0.4 -4,-0.3 16,-0.2 -0.829 78.1-150.6-104.6 142.4 -2.6 -7.8 6.8 70 161 A I E -B 84 0A 43 14,-2.6 14,-1.4 -2,-0.4 2,-0.2 -0.867 17.2-122.8-110.8 143.4 -1.4 -11.4 6.7 71 162 A K E -B 83 0A 127 -2,-0.4 2,-0.4 12,-0.2 12,-0.1 -0.588 22.8-151.3 -83.8 145.6 2.2 -12.3 6.0 72 163 A V E -B 82 0A 37 10,-0.9 2,-0.9 -2,-0.2 10,-0.6 -0.951 17.0-123.6-119.1 135.2 3.0 -14.6 3.0 73 164 A H - 0 0 160 -2,-0.4 2,-0.2 8,-0.2 4,-0.1 -0.616 30.8-138.2 -77.0 107.2 5.9 -17.0 2.7 74 165 A N > - 0 0 11 -2,-0.9 4,-1.8 1,-0.2 3,-0.3 -0.459 4.6-149.7 -67.0 130.8 7.7 -16.0 -0.5 75 166 A E T 4 S+ 0 0 182 1,-0.3 2,-2.4 -2,-0.2 -1,-0.2 0.803 88.0 85.2 -71.4 -24.0 8.8 -19.0 -2.5 76 167 A A T 4 S- 0 0 49 1,-0.2 -1,-0.3 4,-0.1 -2,-0.1 0.098 128.9 -86.2 -66.0 34.6 11.7 -16.9 -3.8 77 168 A T T 4 S- 0 0 134 -2,-2.4 -2,-0.2 -3,-0.3 -1,-0.2 0.905 82.3 -55.6 63.1 39.6 13.4 -18.0 -0.6 78 169 A G S < S+ 0 0 46 -4,-1.8 3,-0.2 2,-0.1 -1,-0.2 0.953 93.0 146.7 59.8 48.2 11.8 -15.1 1.4 79 170 A K S S- 0 0 181 1,-0.3 2,-0.2 0, 0.0 -2,-0.1 0.857 80.5 -3.8 -82.7 -34.8 13.2 -12.5 -1.0 80 171 A S S S- 0 0 42 -51,-0.0 -1,-0.3 -52,-0.0 -4,-0.1 -0.763 77.2-135.4-158.4 103.8 10.1 -10.3 -0.5 81 172 A S - 0 0 43 -2,-0.2 -52,-0.5 -3,-0.2 2,-0.3 -0.369 26.0-125.1 -63.4 139.3 7.2 -11.4 1.6 82 173 A W E -AB 28 72A 86 -10,-0.6 -10,-0.9 -54,-0.1 2,-0.4 -0.649 15.0-138.4 -87.7 142.7 3.8 -10.7 -0.0 83 174 A W E +AB 27 71A 23 -56,-2.4 -56,-1.4 -2,-0.3 2,-0.3 -0.838 27.2 174.6-101.0 133.1 1.2 -8.7 1.8 84 175 A M E - B 0 70A 48 -14,-1.4 -14,-2.6 -2,-0.4 2,-0.1 -0.972 31.4-113.9-136.8 153.2 -2.5 -9.8 1.6 85 176 A L E - B 0 69A 42 -2,-0.3 -16,-0.2 -60,-0.3 -17,-0.1 -0.498 45.9 -96.0 -80.1 154.5 -5.8 -8.8 3.1 86 177 A N > - 0 0 49 -18,-1.1 3,-1.1 1,-0.1 -1,-0.1 -0.544 25.9-142.9 -72.6 133.3 -7.5 -11.4 5.4 87 178 A P T 3 S+ 0 0 117 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.604 86.8 88.0 -72.0 -10.5 -10.1 -13.4 3.5 88 179 A E T 3 S- 0 0 166 1,-0.1 2,-0.3 2,-0.0 -2,-0.0 0.862 112.0 -29.7 -58.8 -28.7 -12.5 -13.5 6.5 89 180 A G < 0 0 46 -3,-1.1 -1,-0.1 0, 0.0 0, 0.0 -0.912 360.0 360.0-165.6-168.9 -13.9 -10.2 5.1 90 181 A G 0 0 109 -2,-0.3 -2,-0.0 -3,-0.1 -74,-0.0 -0.676 360.0 360.0 117.5 360.0 -12.9 -7.0 3.2