==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT, CHAPERONE REGULATOR 19-NOV-06 2E2Z . COMPND 2 MOLECULE: TIM15; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR T.MOMOSE,C.OHSHIMA,M.MAEDA,T.ENDO . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7490.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 49.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 18.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 15.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 108 0, 0.0 2,-0.3 0, 0.0 85,-0.0 0.000 360.0 360.0 360.0 128.8 -13.3 -2.6 -3.1 2 2 A S - 0 0 110 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.895 360.0-133.4-151.3 178.6 -10.2 -3.5 -5.0 3 3 A H + 0 0 185 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.999 23.1 163.6-145.3 142.7 -8.6 -6.2 -7.3 4 4 A M - 0 0 148 -2,-0.3 3,-0.1 3,-0.0 -2,-0.0 -0.936 37.3-134.9-150.0 170.6 -5.2 -7.9 -7.4 5 5 A V S S+ 0 0 132 -2,-0.3 2,-0.0 1,-0.1 -2,-0.0 -0.005 83.9 87.5-119.4 26.5 -3.4 -10.9 -8.8 6 6 A D + 0 0 118 1,-0.1 -1,-0.1 2,-0.1 24,-0.0 -0.426 47.2 121.2-122.8 56.4 -1.6 -12.0 -5.7 7 7 A K + 0 0 139 -3,-0.1 -1,-0.1 22,-0.1 24,-0.0 -0.639 36.8 170.3-120.4 73.2 -4.1 -14.3 -4.0 8 8 A P - 0 0 75 0, 0.0 21,-1.8 0, 0.0 22,-0.7 0.066 22.6-127.5 -69.7-174.5 -2.4 -17.7 -3.7 9 9 A K E -A 28 0A 154 19,-0.3 2,-0.3 20,-0.2 19,-0.3 -0.954 15.3-162.9-139.1 157.5 -3.7 -20.7 -1.7 10 10 A M E -A 27 0A 56 17,-2.6 17,-2.2 -2,-0.3 2,-0.4 -0.978 17.6-125.4-141.3 153.2 -2.4 -23.1 0.9 11 11 A M E -A 26 0A 125 -2,-0.3 2,-0.4 15,-0.2 15,-0.3 -0.819 25.2-179.7-102.1 138.2 -3.4 -26.5 2.3 12 12 A I E -A 25 0A 42 13,-2.6 13,-1.4 -2,-0.4 2,-0.5 -0.976 15.2-150.7-141.2 124.4 -4.0 -27.1 6.0 13 13 A A E -A 24 0A 56 -2,-0.4 2,-0.4 11,-0.2 11,-0.2 -0.821 15.7-172.0 -97.4 127.0 -5.0 -30.4 7.7 14 14 A F E -A 23 0A 49 9,-1.8 9,-1.3 -2,-0.5 2,-0.8 -0.954 22.5-128.6-121.3 137.4 -7.0 -30.2 10.9 15 15 A T E -A 22 0A 73 -2,-0.4 2,-0.8 7,-0.2 7,-0.2 -0.739 22.3-135.6 -87.0 111.6 -7.9 -33.0 13.3 16 16 A C E >> -A 21 0A 0 5,-2.8 5,-0.9 -2,-0.8 4,-0.8 -0.536 16.0-169.2 -69.5 106.1 -11.7 -33.1 13.9 17 17 A K T 45S+ 0 0 174 -2,-0.8 -1,-0.2 1,-0.2 5,-0.1 0.607 81.3 68.3 -71.1 -10.8 -12.0 -33.6 17.6 18 18 A K T 45S+ 0 0 133 1,-0.2 -1,-0.2 3,-0.2 -2,-0.0 0.967 124.1 5.4 -72.4 -55.5 -15.7 -34.3 17.0 19 19 A C T 45S- 0 0 33 2,-0.2 -2,-0.2 -3,-0.1 -1,-0.2 0.090 99.4-116.0-115.9 19.7 -15.4 -37.6 15.2 20 20 A N T <5S+ 0 0 131 -4,-0.8 2,-0.5 1,-0.2 -3,-0.2 0.822 70.3 144.0 48.5 33.8 -11.6 -37.9 15.6 21 21 A T E < -A 16 0A 23 -5,-0.9 -5,-2.8 2,-0.0 2,-0.4 -0.891 38.6-152.8-108.4 132.4 -11.4 -37.7 11.9 22 22 A R E +A 15 0A 176 -2,-0.5 2,-0.3 -7,-0.2 -7,-0.2 -0.812 20.9 162.9-104.8 143.2 -8.5 -35.9 10.1 23 23 A S E -A 14 0A 19 -9,-1.3 -9,-1.8 -2,-0.4 2,-0.3 -0.991 29.7-126.3-156.6 151.0 -8.7 -34.2 6.7 24 24 A S E -A 13 0A 78 -2,-0.3 2,-0.4 -11,-0.2 -11,-0.2 -0.781 23.3-175.2-103.0 145.3 -6.9 -31.7 4.5 25 25 A H E -A 12 0A 20 -13,-1.4 -13,-2.6 -2,-0.3 2,-0.5 -0.998 13.3-149.2-142.4 136.2 -8.4 -28.6 3.0 26 26 A T E +A 11 0A 48 -2,-0.4 2,-0.3 -15,-0.3 -15,-0.2 -0.906 26.3 159.9-109.3 128.7 -6.9 -26.0 0.6 27 27 A M E -A 10 0A 2 -17,-2.2 -17,-2.6 -2,-0.5 2,-0.1 -0.938 48.5 -72.5-141.9 163.2 -8.1 -22.4 0.7 28 28 A S E > -A 9 0A 25 -2,-0.3 4,-2.2 -19,-0.3 -19,-0.3 -0.337 34.3-144.4 -58.7 128.5 -7.0 -18.9 -0.4 29 29 A K H > S+ 0 0 84 -21,-1.8 4,-3.0 1,-0.2 5,-0.3 0.865 101.7 50.8 -62.4 -36.9 -4.1 -17.7 1.8 30 30 A Q H > S+ 0 0 81 -22,-0.7 4,-2.1 2,-0.2 -1,-0.2 0.879 111.9 46.3 -68.7 -38.9 -5.5 -14.1 1.6 31 31 A A H 4 S+ 0 0 2 2,-0.2 53,-0.3 1,-0.2 -2,-0.2 0.818 118.1 43.3 -72.6 -31.6 -9.0 -15.2 2.5 32 32 A Y H >< S+ 0 0 64 -4,-2.2 3,-0.6 2,-0.2 -2,-0.2 0.921 121.5 37.3 -79.3 -47.8 -7.6 -17.3 5.4 33 33 A E H 3< S+ 0 0 88 -4,-3.0 -3,-0.2 1,-0.3 -2,-0.2 0.866 136.2 23.4 -72.0 -37.5 -5.1 -14.8 6.7 34 34 A K T 3< S+ 0 0 115 -4,-2.1 2,-0.3 -5,-0.3 -1,-0.3 -0.559 125.9 18.2-129.7 68.2 -7.4 -11.8 6.0 35 35 A G S < S- 0 0 0 -3,-0.6 2,-0.3 -2,-0.2 50,-0.2 -0.955 89.9 -54.9 160.0-176.4 -10.9 -13.2 5.9 36 36 A T E -B 84 0B 0 48,-1.2 48,-3.1 -2,-0.3 2,-0.4 -0.715 42.3-171.8 -95.3 143.7 -13.3 -16.0 6.9 37 37 A V E -B 83 0B 0 14,-0.5 13,-1.5 -2,-0.3 14,-0.7 -0.993 4.3-168.5-139.0 130.4 -12.8 -19.6 5.9 38 38 A L E -BC 82 49B 13 44,-2.6 44,-1.4 -2,-0.4 2,-0.4 -0.960 4.7-174.8-121.3 135.0 -15.1 -22.6 6.2 39 39 A I E -BC 81 48B 0 9,-1.8 9,-2.6 -2,-0.4 2,-0.4 -0.988 15.2-141.6-131.2 138.1 -14.1 -26.2 5.8 40 40 A S E - C 0 47B 27 40,-0.6 7,-0.2 -2,-0.4 5,-0.0 -0.800 16.2-131.7-100.2 137.9 -16.3 -29.4 5.8 41 41 A C >> - 0 0 0 5,-1.9 2,-2.9 -2,-0.4 3,-1.1 -0.779 13.9-135.1 -92.0 118.2 -15.1 -32.6 7.4 42 42 A P T 34 S+ 0 0 88 0, 0.0 -1,-0.1 0, 0.0 -20,-0.1 -0.348 97.3 44.4 -69.7 67.0 -15.6 -35.7 5.1 43 43 A H T 34 S+ 0 0 124 -2,-2.9 -21,-0.0 -22,-0.1 -3,-0.0 0.195 118.1 32.1-172.3 -39.2 -17.0 -37.8 7.9 44 44 A C T <4 S- 0 0 38 -3,-1.1 -3,-0.0 2,-0.2 0, 0.0 0.227 95.3-128.9-117.3 9.7 -19.5 -35.8 10.0 45 45 A K < + 0 0 178 -4,-1.1 2,-0.3 1,-0.1 -5,-0.0 0.908 63.4 120.0 37.5 80.2 -20.8 -33.7 7.2 46 46 A V - 0 0 48 -5,-0.4 -5,-1.9 34,-0.1 2,-0.3 -0.905 58.3-125.5-169.7 139.3 -20.3 -30.3 8.8 47 47 A R E -C 40 0B 85 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.3 -0.704 25.9-166.7 -92.0 140.3 -18.5 -27.0 8.2 48 48 A H E -C 39 0B 28 -9,-2.6 -9,-1.8 -2,-0.3 2,-0.3 -0.933 22.7-112.7-127.2 150.4 -16.2 -25.6 10.9 49 49 A L E +C 38 0B 87 -2,-0.3 -11,-0.2 -11,-0.2 3,-0.1 -0.639 33.7 166.6 -83.4 134.8 -14.5 -22.2 11.3 50 50 A I S S+ 0 0 51 -13,-1.5 2,-0.3 -2,-0.3 -1,-0.2 0.723 74.2 9.4-113.0 -41.7 -10.7 -22.0 11.0 51 51 A A - 0 0 17 -14,-0.7 2,-0.7 -20,-0.0 -14,-0.5 -0.777 64.2-169.9-147.9 98.1 -10.0 -18.3 10.7 52 52 A D + 0 0 51 -2,-0.3 -16,-0.2 -16,-0.2 -20,-0.1 -0.802 27.3 144.2 -93.4 113.1 -12.7 -15.7 11.2 53 53 A H S S+ 0 0 108 -2,-0.7 -1,-0.2 -22,-0.2 -17,-0.1 0.572 72.5 52.8-118.4 -22.2 -11.6 -12.2 10.2 54 54 A L S S- 0 0 31 30,-0.1 -2,-0.1 32,-0.0 31,-0.0 0.512 95.8-136.9 -92.1 -7.1 -14.8 -10.8 8.8 55 55 A K + 0 0 110 1,-0.1 4,-0.3 3,-0.1 -3,-0.0 0.910 51.5 148.4 50.6 47.8 -16.7 -11.7 12.0 56 56 A I S > S+ 0 0 6 2,-0.2 3,-0.8 1,-0.2 5,-0.4 0.938 75.1 33.0 -75.6 -49.9 -19.6 -13.0 9.9 57 57 A F G > S+ 0 0 54 1,-0.2 3,-2.4 2,-0.1 5,-0.2 0.672 101.8 80.7 -79.8 -18.0 -20.7 -15.7 12.3 58 58 A H G 3 S+ 0 0 135 1,-0.3 -1,-0.2 2,-0.1 -2,-0.2 0.707 82.5 65.7 -60.6 -19.0 -19.7 -13.6 15.2 59 59 A D G < S- 0 0 51 -3,-0.8 -1,-0.3 -4,-0.3 -2,-0.1 0.387 95.3-145.2 -84.0 3.7 -23.0 -11.8 14.7 60 60 A H S < S+ 0 0 153 -3,-2.4 -2,-0.1 1,-0.2 -3,-0.1 0.812 80.9 89.7 32.1 44.5 -24.8 -15.0 15.7 61 61 A H + 0 0 114 -5,-0.4 2,-0.4 1,-0.1 -1,-0.2 0.151 68.2 77.1-149.1 16.5 -27.4 -13.9 13.2 62 62 A V - 0 0 23 -5,-0.2 2,-0.2 -6,-0.1 -1,-0.1 -0.998 60.7-148.6-137.0 137.3 -26.2 -15.5 9.9 63 63 A T >> - 0 0 64 -2,-0.4 4,-1.6 1,-0.1 3,-0.7 -0.652 31.1-111.3-102.0 159.6 -26.3 -19.1 8.7 64 64 A V H 3> S+ 0 0 42 1,-0.3 4,-1.2 -2,-0.2 5,-0.1 0.820 119.2 58.5 -56.0 -31.8 -23.8 -20.9 6.4 65 65 A E H 3> S+ 0 0 123 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.875 101.8 53.5 -66.4 -38.2 -26.5 -20.9 3.7 66 66 A Q H <> S+ 0 0 65 -3,-0.7 4,-1.5 1,-0.2 -2,-0.2 0.909 103.2 56.1 -63.3 -43.5 -26.7 -17.1 3.8 67 67 A L H X S+ 0 0 3 -4,-1.6 4,-1.1 1,-0.2 -1,-0.2 0.860 109.5 47.3 -57.3 -36.8 -23.0 -16.8 3.2 68 68 A M H X S+ 0 0 16 -4,-1.2 4,-2.5 1,-0.2 5,-0.3 0.888 105.8 57.1 -72.4 -40.5 -23.3 -18.9 0.1 69 69 A K H < S+ 0 0 146 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.779 105.9 53.0 -61.4 -26.4 -26.3 -16.9 -1.2 70 70 A A H < S+ 0 0 43 -4,-1.5 -1,-0.2 -5,-0.1 -2,-0.2 0.833 117.3 35.7 -77.8 -34.4 -24.1 -13.8 -1.0 71 71 A N H < S- 0 0 92 -4,-1.1 -2,-0.2 -3,-0.3 -3,-0.1 0.961 107.3-115.4 -82.2 -63.3 -21.3 -15.4 -3.1 72 72 A G < + 0 0 53 -4,-2.5 2,-0.3 1,-0.2 -3,-0.1 0.175 58.5 146.5 145.8 -17.6 -23.3 -17.4 -5.6 73 73 A E + 0 0 63 -5,-0.3 -1,-0.2 1,-0.2 -2,-0.1 -0.289 18.5 177.9 -51.9 108.3 -22.3 -21.0 -4.8 74 74 A Q + 0 0 185 -2,-0.3 2,-0.3 -5,-0.0 -1,-0.2 0.862 60.6 69.5 -82.5 -39.4 -25.5 -22.9 -5.7 75 75 A V + 0 0 59 1,-0.1 4,-0.2 2,-0.0 5,-0.1 -0.596 49.6 174.4 -83.3 141.3 -24.1 -26.4 -4.9 76 76 A S S S+ 0 0 59 -2,-0.3 4,-0.2 2,-0.1 -1,-0.1 0.601 77.8 57.5-116.3 -24.5 -23.3 -27.3 -1.3 77 77 A Q S S+ 0 0 189 1,-0.1 -2,-0.0 2,-0.1 -1,-0.0 0.081 91.0 81.9 -95.3 22.7 -22.3 -31.0 -1.8 78 78 A D S S- 0 0 106 3,-0.0 -1,-0.1 0, 0.0 -2,-0.1 0.929 118.6 -20.6 -88.1 -74.5 -19.6 -30.1 -4.2 79 79 A V S S- 0 0 87 -4,-0.2 -39,-0.3 2,-0.1 -2,-0.1 0.654 71.1-144.3-109.7 -26.8 -16.5 -29.0 -2.3 80 80 A G + 0 0 11 1,-0.2 -40,-0.6 -4,-0.2 2,-0.4 0.734 67.7 101.4 67.0 21.5 -18.1 -28.2 1.1 81 81 A D E +B 39 0B 22 -42,-0.2 2,-0.3 -34,-0.1 -42,-0.2 -0.999 45.4 178.4-141.1 136.9 -15.6 -25.3 1.5 82 82 A L E -B 38 0B 11 -44,-1.4 -44,-2.6 -2,-0.4 2,-0.4 -0.986 11.2-155.3-138.6 148.1 -15.9 -21.6 1.0 83 83 A E E -B 37 0B 65 -2,-0.3 2,-0.4 -46,-0.2 -46,-0.2 -0.973 5.8-168.3-126.8 138.6 -13.5 -18.6 1.4 84 84 A F E +B 36 0B 11 -48,-3.1 -48,-1.2 -2,-0.4 3,-0.1 -0.989 19.8 161.7-129.5 129.8 -14.4 -15.0 2.0 85 85 A E S S+ 0 0 101 -2,-0.4 2,-0.2 -50,-0.2 -1,-0.1 0.555 82.0 22.1-116.5 -19.2 -12.0 -12.0 1.8 86 86 A D S S- 0 0 100 -50,-0.1 -1,-0.2 -85,-0.0 -51,-0.1 -0.665 76.5-148.4-154.5 91.8 -14.5 -9.2 1.6 87 87 A I - 0 0 23 -2,-0.2 -20,-0.0 -3,-0.1 -3,-0.0 -0.141 27.2-106.4 -58.2 155.0 -18.1 -9.7 2.8 88 88 A P > - 0 0 47 0, 0.0 4,-0.5 0, 0.0 -1,-0.1 0.117 18.3-119.2 -69.8-170.7 -20.9 -7.8 1.0 89 89 A D H > S+ 0 0 103 2,-0.1 4,-1.2 3,-0.1 -2,-0.1 0.641 105.5 64.4-106.4 -23.7 -22.9 -4.8 2.3 90 90 A S H > S+ 0 0 99 2,-0.2 4,-0.8 1,-0.1 -1,-0.1 0.800 105.6 46.9 -70.4 -29.2 -26.3 -6.4 2.3 91 91 A L H >> S+ 0 0 26 2,-0.2 3,-1.2 1,-0.2 4,-0.9 0.973 110.1 47.7 -75.9 -59.6 -25.2 -8.9 4.9 92 92 A K H >X S+ 0 0 90 -4,-0.5 4,-1.2 1,-0.3 3,-0.5 0.795 102.7 69.4 -52.2 -29.1 -23.5 -6.6 7.4 93 93 A D H >< S+ 0 0 82 -4,-1.2 3,-0.8 1,-0.3 -1,-0.3 0.922 96.6 49.3 -56.3 -47.4 -26.6 -4.4 7.0 94 94 A V H << S+ 0 0 68 -3,-1.2 3,-0.5 -4,-0.8 -1,-0.3 0.741 111.9 50.7 -64.9 -22.7 -28.7 -7.0 8.9 95 95 A L H << S+ 0 0 47 -4,-0.9 -1,-0.3 -3,-0.5 -2,-0.2 0.639 114.9 43.1 -88.6 -16.9 -26.0 -7.0 11.6 96 96 A G S << S+ 0 0 44 -4,-1.2 -1,-0.2 -3,-0.8 -2,-0.1 -0.365 88.0 87.9-126.0 54.5 -26.0 -3.2 11.9 97 97 A K S S+ 0 0 123 -3,-0.5 -2,-0.1 3,-0.0 -1,-0.1 0.668 81.5 54.6-116.7 -35.5 -29.6 -2.3 11.9 98 98 A Y S S+ 0 0 212 -4,-0.2 2,-0.6 1,-0.1 -2,-0.1 0.858 105.8 59.1 -69.2 -36.1 -30.6 -2.5 15.5 99 99 A A 0 0 83 -4,-0.2 -1,-0.1 0, 0.0 -4,-0.0 -0.862 360.0 360.0-100.9 116.5 -27.8 -0.1 16.5 100 100 A K 0 0 241 -2,-0.6 -3,-0.0 -3,-0.0 -4,-0.0 -0.879 360.0 360.0-149.2 360.0 -27.9 3.3 14.9