==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 27-NOV-06 2E3L . COMPND 2 MOLECULE: TRANSCRIPTION FACTOR GTF2IRD2 BETA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.NEZU,Y.DOI-KATAYAMA,H.HIROTA,C.KUROSAKI,F.HAYASHI, . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7433.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 49.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 26.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 134 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-162.2 2.0 7.2 -14.7 2 2 A S + 0 0 99 2,-0.0 2,-0.2 12,-0.0 27,-0.1 -0.813 360.0 158.4-119.9 88.6 0.0 8.3 -11.6 3 3 A S + 0 0 103 -2,-0.6 2,-0.1 2,-0.0 11,-0.0 -0.656 12.9 169.9-107.2 164.5 0.9 11.9 -10.8 4 4 A G + 0 0 23 -2,-0.2 3,-0.1 10,-0.1 -2,-0.0 -0.504 30.3 112.6-177.7 101.1 -1.0 14.5 -8.8 5 5 A S + 0 0 119 1,-0.3 2,-0.1 -2,-0.1 6,-0.1 0.500 65.1 61.4-136.2 -57.2 0.3 17.8 -7.6 6 6 A S S S+ 0 0 107 4,-0.1 -1,-0.3 5,-0.0 5,-0.2 -0.397 87.9 37.6 -78.5 157.4 -1.5 20.6 -9.4 7 7 A G S S- 0 0 55 3,-0.1 4,-0.4 -2,-0.1 -3,-0.0 0.122 70.8-119.5 84.4 158.3 -5.3 21.2 -9.0 8 8 A L S > S+ 0 0 64 2,-0.1 4,-2.9 3,-0.1 5,-0.3 0.884 105.0 51.3 -96.0 -65.3 -7.5 20.7 -6.0 9 9 A R H > S+ 0 0 118 1,-0.3 4,-1.7 2,-0.2 5,-0.1 0.876 117.0 43.7 -37.9 -54.2 -10.0 18.1 -6.9 10 10 A K H > S+ 0 0 89 1,-0.2 4,-4.2 2,-0.2 3,-0.5 0.946 108.8 57.3 -58.6 -51.4 -7.2 15.9 -8.1 11 11 A A H > S+ 0 0 24 -4,-0.4 4,-2.0 1,-0.3 -1,-0.2 0.899 105.9 50.7 -44.9 -49.6 -5.2 16.7 -5.0 12 12 A V H X S+ 0 0 0 -4,-2.9 4,-2.8 1,-0.2 -1,-0.3 0.884 115.5 43.2 -56.7 -40.7 -8.1 15.4 -2.9 13 13 A E H X S+ 0 0 26 -4,-1.7 4,-2.0 -3,-0.5 -2,-0.2 0.943 109.7 53.8 -70.2 -50.3 -8.0 12.3 -5.0 14 14 A D H X S+ 0 0 38 -4,-4.2 4,-1.4 1,-0.2 -1,-0.2 0.789 115.3 45.5 -54.2 -28.3 -4.2 12.0 -5.0 15 15 A Y H X S+ 0 0 39 -4,-2.0 4,-1.9 -5,-0.4 -2,-0.2 0.973 102.9 57.2 -78.4 -63.6 -4.6 12.2 -1.2 16 16 A F H X S+ 0 0 0 -4,-2.8 4,-2.1 1,-0.3 -2,-0.2 0.795 109.7 51.8 -36.3 -38.3 -7.5 9.8 -0.6 17 17 A C H X S+ 0 0 17 -4,-2.0 4,-3.1 2,-0.2 5,-0.4 0.989 101.9 55.4 -64.7 -61.9 -5.3 7.2 -2.3 18 18 A F H X S+ 0 0 97 -4,-1.4 4,-1.5 1,-0.2 -1,-0.2 0.784 109.2 52.9 -40.3 -33.5 -2.2 7.9 -0.1 19 19 A C H >X S+ 0 0 19 -4,-1.9 4,-2.3 2,-0.2 3,-0.8 0.991 108.9 44.3 -67.4 -63.3 -4.6 7.1 2.7 20 20 A Y H 3X S+ 0 0 17 -4,-2.1 4,-3.4 1,-0.3 -2,-0.2 0.855 115.5 50.6 -48.4 -40.7 -5.8 3.8 1.4 21 21 A G H 3X>S+ 0 0 1 -4,-3.1 5,-2.4 9,-0.2 4,-1.2 0.832 110.1 48.9 -67.5 -33.8 -2.2 2.9 0.6 22 22 A K H <<5S+ 0 0 152 -4,-1.5 -2,-0.2 -3,-0.8 -1,-0.2 0.760 115.5 45.2 -75.9 -26.4 -1.2 3.9 4.1 23 23 A A H <5S+ 0 0 41 -4,-2.3 -2,-0.2 1,-0.2 -3,-0.2 0.887 108.3 54.3 -81.8 -44.1 -4.0 1.7 5.4 24 24 A L H <5S- 0 0 85 -4,-3.4 -2,-0.2 -5,-0.2 -3,-0.2 0.834 116.1-116.7 -57.9 -33.6 -3.3 -1.2 3.2 25 25 A G T <5S+ 0 0 66 -4,-1.2 -3,-0.2 1,-0.3 2,-0.1 0.630 70.6 130.2 102.3 21.4 0.2 -1.1 4.5 26 26 A T < - 0 0 53 -5,-2.4 -1,-0.3 -6,-0.2 4,-0.1 -0.419 61.5-132.9 -98.8 176.4 1.9 -0.3 1.2 27 27 A T S S+ 0 0 142 -2,-0.1 2,-0.2 2,-0.1 -5,-0.1 0.071 84.2 60.0-116.2 19.9 4.4 2.4 0.2 28 28 A V S S- 0 0 94 -7,-0.2 2,-0.4 -11,-0.1 -2,-0.2 -0.657 92.1 -80.0-132.4-172.5 2.6 3.5 -2.9 29 29 A M - 0 0 63 -2,-0.2 -11,-0.1 -27,-0.1 -2,-0.1 -0.817 36.3-156.9-100.6 135.7 -0.8 5.0 -3.9 30 30 A V - 0 0 33 -2,-0.4 2,-1.3 -13,-0.4 -9,-0.2 -0.900 25.6-113.8-113.6 141.0 -3.9 2.8 -4.3 31 31 A P - 0 0 107 0, 0.0 -17,-0.1 0, 0.0 -14,-0.0 -0.591 38.5-122.4 -75.0 95.3 -6.9 3.6 -6.4 32 32 A V - 0 0 4 -2,-1.3 2,-2.1 -19,-0.2 3,-0.2 -0.120 20.8-130.1 -40.5 114.3 -9.6 4.1 -3.8 33 33 A P > + 0 0 18 0, 0.0 4,-2.8 0, 0.0 5,-0.2 -0.518 40.1 166.6 -75.0 80.6 -12.2 1.5 -4.8 34 34 A Y H > S+ 0 0 34 -2,-2.1 4,-4.5 1,-0.2 5,-0.5 0.983 72.1 54.9 -57.9 -64.5 -15.2 3.8 -4.7 35 35 A E H > S+ 0 0 151 1,-0.2 4,-2.1 -3,-0.2 -1,-0.2 0.809 114.0 46.7 -38.2 -38.3 -17.6 1.6 -6.5 36 36 A K H > S+ 0 0 71 2,-0.2 4,-3.7 3,-0.2 -2,-0.2 0.995 117.6 37.4 -69.0 -67.1 -16.7 -0.9 -3.9 37 37 A M H < S+ 0 0 3 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.900 118.8 51.8 -50.9 -47.1 -17.0 1.2 -0.8 38 38 A L H < S+ 0 0 106 -4,-4.5 -1,-0.2 -5,-0.2 3,-0.2 0.947 113.8 43.2 -55.4 -53.1 -20.0 3.0 -2.3 39 39 A R H < S+ 0 0 211 -4,-2.1 2,-0.4 -5,-0.5 -2,-0.2 0.950 135.5 9.8 -57.6 -53.6 -21.7 -0.3 -3.0 40 40 A D < - 0 0 111 -4,-3.7 4,-0.3 -5,-0.2 -1,-0.3 -0.995 54.9-166.6-134.9 127.3 -20.7 -1.7 0.4 41 41 A Q S S+ 0 0 124 -2,-0.4 -4,-0.1 -3,-0.2 -3,-0.1 0.138 71.1 97.8 -95.2 17.8 -19.2 0.2 3.3 42 42 A S S S+ 0 0 81 1,-0.1 -1,-0.2 -5,-0.1 3,-0.1 -0.080 82.0 50.8 -95.2 32.3 -18.4 -3.1 5.0 43 43 A A S S+ 0 0 6 1,-0.4 38,-1.8 -3,-0.2 39,-1.7 0.578 116.6 15.2-129.5 -54.0 -14.8 -2.9 3.7 44 44 A V E -A 80 0A 1 -4,-0.3 -1,-0.4 36,-0.2 2,-0.3 -0.988 64.6-150.3-132.7 140.5 -13.4 0.6 4.5 45 45 A V E -A 79 0A 49 34,-1.7 34,-1.6 -2,-0.4 2,-0.4 -0.810 10.0-139.2-110.0 150.9 -14.7 3.2 6.9 46 46 A V E +A 78 0A 35 -2,-0.3 2,-0.4 32,-0.2 32,-0.2 -0.917 22.0 174.3-112.7 135.4 -14.3 6.9 6.6 47 47 A Q E +A 77 0A 115 30,-1.5 30,-3.6 -2,-0.4 -2,-0.0 -0.978 56.3 43.1-144.3 126.6 -13.5 9.2 9.6 48 48 A G S S+ 0 0 32 -2,-0.4 27,-0.2 28,-0.3 28,-0.2 0.689 74.7 138.9 111.2 34.0 -12.7 12.9 9.7 49 49 A L - 0 0 39 -3,-0.1 -1,-0.2 26,-0.1 3,-0.1 -0.643 56.0 -93.1-105.3 164.2 -15.4 14.2 7.3 50 50 A P > - 0 0 18 0, 0.0 3,-0.8 0, 0.0 -1,-0.1 -0.374 56.3 -78.7 -75.0 154.5 -17.5 17.3 7.5 51 51 A E T 3 S+ 0 0 198 1,-0.3 3,-0.1 -2,-0.1 0, 0.0 -0.262 117.7 7.6 -54.1 131.9 -21.0 17.2 9.0 52 52 A G T 3 S+ 0 0 82 1,-0.2 2,-0.3 -3,-0.1 -1,-0.3 0.935 104.8 120.5 58.5 50.5 -23.5 15.8 6.6 53 53 A V < - 0 0 48 -3,-0.8 -1,-0.2 -4,-0.0 2,-0.1 -0.959 46.3-156.7-148.6 125.3 -20.8 14.8 4.1 54 54 A A - 0 0 52 -2,-0.3 -3,-0.0 -3,-0.1 0, 0.0 -0.376 35.0-106.6 -93.4 175.0 -20.0 11.4 2.7 55 55 A F S S+ 0 0 9 -2,-0.1 -17,-0.1 -6,-0.1 -1,-0.1 0.220 70.2 144.7 -86.0 14.1 -16.7 10.2 1.2 56 56 A Q - 0 0 81 1,-0.1 5,-0.2 2,-0.1 4,-0.0 0.049 66.2 -55.0 -47.7 162.9 -18.3 10.3 -2.2 57 57 A H >> - 0 0 57 1,-0.1 4,-0.8 2,-0.1 3,-0.7 -0.027 46.0-135.4 -42.0 144.1 -16.2 11.3 -5.1 58 58 A P T 34 S+ 0 0 0 0, 0.0 8,-0.1 0, 0.0 -1,-0.1 0.802 96.9 80.0 -75.0 -31.1 -14.5 14.7 -4.6 59 59 A E T 34 S+ 0 0 102 1,-0.3 -2,-0.1 -50,-0.1 -50,-0.1 0.737 98.6 46.2 -46.7 -23.9 -15.4 15.8 -8.1 60 60 A N T <4 S+ 0 0 91 -3,-0.7 -1,-0.3 2,-0.1 3,-0.1 0.901 88.4 101.2 -85.1 -48.7 -18.7 16.5 -6.5 61 61 A Y S < S- 0 0 13 -4,-0.8 2,-0.1 -5,-0.2 -52,-0.1 -0.022 83.5-107.7 -39.2 135.2 -17.4 18.3 -3.4 62 62 A D > - 0 0 115 1,-0.1 4,-2.9 4,-0.0 5,-0.4 -0.391 29.8-104.8 -70.0 146.9 -17.8 22.0 -3.8 63 63 A L H > S+ 0 0 117 1,-0.3 4,-1.4 2,-0.2 -1,-0.1 0.778 127.8 51.7 -40.0 -30.4 -14.6 24.0 -4.3 64 64 A A H > S+ 0 0 69 2,-0.2 4,-2.3 3,-0.1 -1,-0.3 0.969 110.2 43.6 -72.5 -57.0 -15.2 24.9 -0.7 65 65 A T H > S+ 0 0 25 1,-0.2 4,-3.8 2,-0.2 5,-0.3 0.926 110.4 56.6 -53.1 -50.6 -15.6 21.4 0.6 66 66 A L H X S+ 0 0 11 -4,-2.9 4,-1.9 1,-0.3 -1,-0.2 0.906 112.3 41.8 -47.3 -49.2 -12.6 20.3 -1.5 67 67 A K H X S+ 0 0 91 -4,-1.4 4,-2.6 -5,-0.4 -1,-0.3 0.812 113.4 55.7 -68.5 -30.9 -10.6 22.9 0.3 68 68 A W H X S+ 0 0 93 -4,-2.3 4,-1.3 2,-0.2 -2,-0.2 0.974 105.5 49.1 -64.4 -56.4 -12.3 21.9 3.5 69 69 A I H >< S+ 0 0 0 -4,-3.8 3,-0.6 1,-0.3 7,-0.3 0.895 115.8 45.0 -48.8 -45.7 -11.3 18.3 3.2 70 70 A L H >< S+ 0 0 39 -4,-1.9 3,-1.2 -5,-0.3 4,-0.3 0.881 112.0 51.3 -66.1 -39.4 -7.8 19.5 2.5 71 71 A E H 3< S+ 0 0 168 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.590 125.9 28.6 -72.9 -10.6 -8.0 21.9 5.4 72 72 A N T << S+ 0 0 63 -4,-1.3 4,-0.4 -3,-0.6 -1,-0.3 -0.175 84.6 113.5-141.9 40.4 -9.2 19.0 7.5 73 73 A K X + 0 0 88 -3,-1.2 3,-1.1 2,-0.2 -3,-0.1 0.826 67.5 68.6 -81.0 -35.3 -7.4 16.1 5.8 74 74 A A T 3 S+ 0 0 97 -4,-0.3 -1,-0.2 1,-0.3 -4,-0.1 0.707 103.6 48.2 -55.8 -19.1 -5.2 15.5 8.8 75 75 A G T 3 S+ 0 0 42 -6,-0.2 2,-0.4 -3,-0.2 -1,-0.3 0.692 90.0 96.0 -92.8 -24.2 -8.5 14.4 10.4 76 76 A I < + 0 0 6 -3,-1.1 2,-0.4 -4,-0.4 -28,-0.3 -0.570 52.2 167.1 -72.3 121.5 -9.5 12.2 7.5 77 77 A S E -A 47 0A 54 -30,-3.6 -30,-1.5 -2,-0.4 2,-0.9 -0.999 35.1-131.6-141.3 135.3 -8.6 8.6 8.2 78 78 A F E -A 46 0A 17 -2,-0.4 2,-1.4 -32,-0.2 -32,-0.2 -0.769 17.4-155.3 -90.0 105.0 -9.6 5.4 6.5 79 79 A I E -A 45 0A 66 -34,-1.6 -34,-1.7 -2,-0.9 2,-0.1 -0.667 15.6-155.2 -82.6 93.0 -10.6 2.9 9.2 80 80 A I E +A 44 0A 71 -2,-1.4 -36,-0.2 -36,-0.2 -37,-0.0 -0.422 25.9 165.4 -69.8 142.8 -10.0 -0.4 7.5 81 81 A N - 0 0 115 -38,-1.8 -37,-0.2 1,-0.4 -1,-0.2 0.624 62.9 -20.1-124.0 -44.0 -12.0 -3.3 8.7 82 82 A R - 0 0 148 -39,-1.7 -1,-0.4 0, 0.0 0, 0.0 -0.972 64.8-100.5-166.6 157.2 -11.6 -6.0 6.0 83 83 A P - 0 0 109 0, 0.0 2,-0.2 0, 0.0 -39,-0.0 -0.100 44.1 -96.9 -75.0 178.0 -10.6 -6.5 2.4 84 84 A F - 0 0 63 2,-0.0 2,-0.3 -41,-0.0 -41,-0.0 -0.512 29.3-136.4 -95.5 165.4 -13.0 -7.0 -0.5 85 85 A L + 0 0 172 -2,-0.2 -1,-0.0 2,-0.1 0, 0.0 -0.870 49.1 76.0-121.9 155.2 -14.1 -10.2 -2.2 86 86 A G S S- 0 0 55 -2,-0.3 2,-0.8 2,-0.1 -2,-0.0 -0.595 84.7 -46.7 131.4 168.1 -14.5 -11.2 -5.8 87 87 A P S S+ 0 0 141 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 -0.614 80.3 121.0 -75.0 109.5 -12.5 -12.2 -8.8 88 88 A E + 0 0 134 -2,-0.8 -2,-0.1 2,-0.0 0, 0.0 -0.782 10.5 140.9-172.7 124.6 -9.6 -9.8 -9.1 89 89 A S - 0 0 117 -2,-0.2 -1,-0.0 2,-0.0 0, 0.0 0.570 26.5-169.0-128.9 -63.7 -5.9 -10.1 -9.1 90 90 A Q - 0 0 161 2,-0.0 2,-0.1 3,-0.0 -2,-0.0 0.836 26.7-115.8 63.7 112.1 -4.2 -7.8 -11.6 91 91 A L - 0 0 160 2,-0.1 2,-1.2 1,-0.1 -2,-0.0 -0.358 24.8-110.2 -74.7 157.1 -0.5 -8.5 -12.2 92 92 A G S S+ 0 0 87 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.724 83.2 72.4 -93.0 89.2 2.1 -6.0 -11.2 93 93 A G - 0 0 69 -2,-1.2 2,-0.4 2,-0.0 -2,-0.1 -0.675 58.3-145.6 167.1 137.6 3.4 -4.7 -14.5 94 94 A S + 0 0 137 -2,-0.2 -2,-0.0 2,-0.0 0, 0.0 -0.924 21.4 167.5-119.8 143.6 2.4 -2.5 -17.4 95 95 A G - 0 0 56 -2,-0.4 2,-0.7 2,-0.0 -2,-0.0 -0.990 41.3-101.9-154.6 148.0 3.2 -2.9 -21.1 96 96 A P - 0 0 137 0, 0.0 2,-0.9 0, 0.0 -2,-0.0 -0.613 34.4-149.0 -75.1 110.8 2.1 -1.5 -24.5 97 97 A S - 0 0 124 -2,-0.7 2,-0.7 2,-0.0 -2,-0.0 -0.731 9.3-158.2 -85.1 108.0 -0.2 -4.1 -26.1 98 98 A S 0 0 121 -2,-0.9 -1,-0.0 1,-0.2 0, 0.0 -0.794 360.0 360.0 -91.4 114.7 0.3 -3.8 -29.8 99 99 A G 0 0 128 -2,-0.7 -1,-0.2 0, 0.0 -2,-0.0 0.564 360.0 360.0 93.8 360.0 -2.7 -5.3 -31.7